RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 DZIP1Q86YF9 867 aaKnown RBP8.8□□□□□ -1
RTTN-223ENST00000640931 CCDC82Q8N4S0 544 aa8.8□□□□□ -1
RTTN-223ENST00000640931 CNBD1Q8NA66 436 aa8.8□□□□□ -1
RTTN-223ENST00000640931 CCHCR1Q8TD31 782 aa8.8□□□□□ -1
RTTN-223ENST00000640931 LEO1Q8WVC0 666 aaPredicted RBP8.8□□□□□ -1
RTTN-223ENST00000640931 DDX12PQ92771 950 aa8.8□□□□□ -1
RTTN-223ENST00000640931 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.8□□□□□ -1
RTTN-223ENST00000640931 RIOK1Q9BRS2 568 aaKnown RBP8.8□□□□□ -1
RTTN-223ENST00000640931 CBX8Q9HC52 389 aa8.8□□□□□ -1
RTTN-223ENST00000640931 JADE2Q9NQC1 790 aa8.8□□□□□ -1
RTTN-223ENST00000640931 AATFQ9NY61 560 aaKnown RBP eCLIP8.8□□□□□ -1
RTTN-223ENST00000640931 DDX25Q9UHL0 483 aaKnown RBP8.8□□□□□ -1
RTTN-223ENST00000640931 BZW2Q9Y6E2 419 aaKnown RBP8.8□□□□□ -1
RTTN-223ENST00000640931 SALL1Q9NSC2 1324 aa8.8□□□□□ -1
RTTN-223ENST00000640931 IRS2Q9Y4H2 1338 aa8.8□□□□□ -1
RTTN-223ENST00000640931 ZNF831Q5JPB2 1677 aa8.79□□□□□ -1
RTTN-223ENST00000640931 MAGEB6P1A0A0J9YX57 407 aa8.79□□□□□ -1
RTTN-223ENST00000640931 GOLGA8AA7E2F4 631 aa8.79□□□□□ -1
RTTN-223ENST00000640931 BIN1O00499 593 aa8.79□□□□□ -1
RTTN-223ENST00000640931 EVI5O60447 810 aa8.79□□□□□ -1
RTTN-223ENST00000640931 URI1O94763 535 aaPredicted RBP8.79□□□□□ -1
RTTN-223ENST00000640931 PDHBP11177 359 aa8.79□□□□□ -1
RTTN-223ENST00000640931 ATP4AP20648 1035 aa8.79□□□□□ -1
RTTN-223ENST00000640931 SMARCA1P28370 1054 aa8.79□□□□□ -1
RTTN-223ENST00000640931 HIBADHP31937 336 aaKnown RBP8.79□□□□□ -1
RTTN-223ENST00000640931 GNAQP50148 359 aa8.79□□□□□ -1
RTTN-223ENST00000640931 TYRO3Q06418 890 aa8.79□□□□□ -1
RTTN-223ENST00000640931 PPFIA1Q13136 1202 aa8.79□□□□□ -1
RTTN-223ENST00000640931 E4F1Q66K89 784 aaPredicted RBP8.79□□□□□ -1
RTTN-223ENST00000640931 CRELD2Q6UXH1 353 aaPredicted RBP8.79□□□□□ -1
RTTN-223ENST00000640931 TEX9Q8N6V9 391 aa8.79□□□□□ -1
RTTN-223ENST00000640931 ZNF784Q8NCA9 323 aaPredicted RBP8.79□□□□□ -1
RTTN-223ENST00000640931 BCAS4Q8TDM0 211 aa8.79□□□□□ -1
RTTN-223ENST00000640931 IGDCC4Q8TDY8 1250 aa8.79□□□□□ -1
RTTN-223ENST00000640931 RSPH1Q8WYR4 309 aa8.79□□□□□ -1
RTTN-223ENST00000640931 PPP2R3CQ969Q6 453 aa8.79□□□□□ -1
RTTN-223ENST00000640931 IWS1Q96ST2 819 aa8.79□□□□□ -1
RTTN-223ENST00000640931 SH3GL1Q99961 368 aa8.79□□□□□ -1
RTTN-223ENST00000640931 NRDE2Q9H7Z3 1164 aa8.79□□□□□ -1
RTTN-223ENST00000640931 LY9Q9HBG7 655 aa8.79□□□□□ -1
RTTN-223ENST00000640931 HOXC10Q9NYD6 342 aa8.79□□□□□ -1
RTTN-223ENST00000640931 ZFATQ9P243 1243 aa8.79□□□□□ -1
RTTN-223ENST00000640931 IMPACTQ9P2X3 320 aa8.79□□□□□ -1
RTTN-223ENST00000640931 FBXO9Q9UK97 447 aaPredicted RBP8.79□□□□□ -1
RTTN-223ENST00000640931 PARP3Q9Y6F1 533 aa8.79□□□□□ -1
RTTN-223ENST00000640931 COL24A1Q17RW2 1714 aa8.79□□□□□ -1
RTTN-223ENST00000640931 DOCK2Q92608 1830 aa8.79□□□□□ -1
RTTN-223ENST00000640931 RASSF10A6NK89 507 aa8.79□□□□□ -1
RTTN-223ENST00000640931 EIF3HO15372 352 aaKnown RBP eCLIP8.79□□□□□ -1
RTTN-223ENST00000640931 RANBP6O60518 1105 aaKnown RBP8.79□□□□□ -1
RTTN-223ENST00000640931 NMT2O60551 498 aa8.79□□□□□ -1
RTTN-223ENST00000640931 POLR3DP05423 398 aaPredicted RBP8.79□□□□□ -1
RTTN-223ENST00000640931 CCDC166P0CW27 439 aa8.79□□□□□ -1
RTTN-223ENST00000640931 C7P10643 843 aa8.79□□□□□ -1
RTTN-223ENST00000640931 MYCLP1P12525 358 aaPredicted RBP8.79□□□□□ -1
RTTN-223ENST00000640931 GUCY1A2P33402 732 aa8.79□□□□□ -1
RTTN-223ENST00000640931 PSMC4P43686 418 aa8.79□□□□□ -1
RTTN-223ENST00000640931 PPP2R3AQ06190 1150 aa8.79□□□□□ -1
RTTN-223ENST00000640931 DIXDC1Q155Q3 683 aa8.79□□□□□ -1
RTTN-223ENST00000640931 MAP3K11Q16584 847 aa8.79□□□□□ -1
RTTN-223ENST00000640931 CAVIN4Q5BKX8 364 aa8.79□□□□□ -1
RTTN-223ENST00000640931 GALNT17Q6IS24 598 aa8.79□□□□□ -1
RTTN-223ENST00000640931 HOOK3Q86VS8 718 aa8.79□□□□□ -1
RTTN-223ENST00000640931 LRRC49Q8IUZ0 686 aa8.79□□□□□ -1
RTTN-223ENST00000640931 CCDC13Q8IYE1 715 aa8.79□□□□□ -1
RTTN-223ENST00000640931 MSANTD4Q8NCY6 345 aa8.79□□□□□ -1
RTTN-223ENST00000640931 ANKK1Q8NFD2 765 aa8.79□□□□□ -1
RTTN-223ENST00000640931 NSMCE1Q8WV22 266 aa8.79□□□□□ -1
RTTN-223ENST00000640931 SLC39A7Q92504 469 aa8.79□□□□□ -1
RTTN-223ENST00000640931 NSUN4Q96CB9 384 aaKnown RBP8.79□□□□□ -1
RTTN-223ENST00000640931 ZNF274Q96GC6 653 aaPredicted RBP8.79□□□□□ -1
RTTN-223ENST00000640931 FAM217BQ9NTX9 383 aaPredicted RBP8.79□□□□□ -1
RTTN-223ENST00000640931 WDR35Q9P2L0 1181 aa8.79□□□□□ -1
RTTN-223ENST00000640931 C15orf41Q9Y2V0 281 aa8.79□□□□□ -1
RTTN-223ENST00000640931 hCG_1642624A0A1W2PR95 340 aa8.78□□□□□ -1
RTTN-223ENST00000640931 TMCC1O94876 653 aa8.78□□□□□ -1
RTTN-223ENST00000640931 NPTXRO95502 500 aa8.78□□□□□ -1
RTTN-223ENST00000640931 BCRP11274 1271 aa8.78□□□□□ -1
RTTN-223ENST00000640931 IBSPP21815 317 aaPredicted RBP8.78□□□□□ -1
RTTN-223ENST00000640931 ALDH3A1P30838 453 aa8.78□□□□□ -1
RTTN-223ENST00000640931 PDE4BQ07343 736 aa8.78□□□□□ -1
RTTN-223ENST00000640931 CBX3Q13185 183 aa8.78□□□□□ -1
RTTN-223ENST00000640931 GRAPQ13588 217 aa8.78□□□□□ -1
RTTN-223ENST00000640931 CASP8Q14790 479 aa8.78□□□□□ -1
RTTN-223ENST00000640931 RCN1Q15293 331 aa8.78□□□□□ -1
RTTN-223ENST00000640931 FXNQ16595 210 aa8.78□□□□□ -1
RTTN-223ENST00000640931 GNPTABQ3T906 1256 aa8.78□□□□□ -1
RTTN-223ENST00000640931 TMEM67Q5HYA8 995 aa8.78□□□□□ -1
RTTN-223ENST00000640931 NAA16Q6N069 864 aaPredicted RBP8.78□□□□□ -1
RTTN-223ENST00000640931 COL23A1Q86Y22 540 aaPredicted RBP8.78□□□□□ -1
RTTN-223ENST00000640931 HOMER1Q86YM7 354 aa8.78□□□□□ -1
RTTN-223ENST00000640931 FUKQ8N0W3 1084 aa8.78□□□□□ -1
RTTN-223ENST00000640931 RASSF8Q8NHQ8 419 aa8.78□□□□□ -1
RTTN-223ENST00000640931 GRAPLQ8TC17 118 aaPredicted RBP8.78□□□□□ -1
RTTN-223ENST00000640931 DHTKD1Q96HY7 919 aaPredicted RBP8.78□□□□□ -1
RTTN-223ENST00000640931 USP28Q96RU2 1077 aa8.78□□□□□ -1
RTTN-223ENST00000640931 OSBPL5Q9H0X9 879 aaPredicted RBP8.78□□□□□ -1
RTTN-223ENST00000640931 GALNT8Q9NY28 637 aa8.78□□□□□ -1
RTTN-223ENST00000640931 CIDEBQ9UHD4 219 aa8.78□□□□□ -1
RTTN-223ENST00000640931 STK24Q9Y6E0 443 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms