RNA–Protein interactions for RNA: ENST00000640728.1

SPIN3-244, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,954 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-244ENST00000640728 TMEM119Q4V9L6 283 aa23.97■■□□□ 1.43
SPIN3-244ENST00000640728 EAPPQ56P03 285 aaPredicted RBP23.97■■□□□ 1.43
SPIN3-244ENST00000640728 CNKSR2Q8WXI2 1034 aa23.97■■□□□ 1.43
SPIN3-244ENST00000640728 HSD3B7Q9H2F3 369 aa23.97■■□□□ 1.43
SPIN3-244ENST00000640728 BLOC1S4Q9NUP1 217 aa23.97■■□□□ 1.43
SPIN3-244ENST00000640728 COL20A1Q9P218 1284 aa23.97■■□□□ 1.43
SPIN3-244ENST00000640728 SPIRE1Q08AE8 756 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 PNMA8AQ86V59 439 aaPredicted RBP23.96■■□□□ 1.43
SPIN3-244ENST00000640728 CDK5RAP3Q96JB5 506 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 RMND1Q9NWS8 449 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 RPTORQ8N122 1335 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 SLC26A4O43511 780 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 ERCC5P28715 1186 aaPredicted RBP23.96■■□□□ 1.43
SPIN3-244ENST00000640728 TPM4P67936 248 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 HYIQ5T013 277 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 ANKRD13AQ8IZ07 590 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 TRERF1Q96PN7 1200 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 C7orf25Q9BPX7 421 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 HOMER2Q9NSB8 354 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 HOXC10Q9NYD6 342 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 RABGAP1Q9Y3P9 1069 aa23.96■■□□□ 1.43
SPIN3-244ENST00000640728 UBXN2AP68543 259 aa23.95■■□□□ 1.42
SPIN3-244ENST00000640728 PPATQ06203 517 aa23.95■■□□□ 1.42
SPIN3-244ENST00000640728 FMR1Q06787 632 aaKnown RBP eCLIP23.95■■□□□ 1.42
SPIN3-244ENST00000640728 SYTL5Q8TDW5 730 aaPredicted RBP23.95■■□□□ 1.42
SPIN3-244ENST00000640728 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.95■■□□□ 1.42
SPIN3-244ENST00000640728 MYPNQ86TC9 1320 aa23.95■■□□□ 1.42
SPIN3-244ENST00000640728 ATP2A1O14983 1001 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 KLRC4O43908 158 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 CD44P16070 742 aaKnown RBP23.94■■□□□ 1.42
SPIN3-244ENST00000640728 AMPD3Q01432 767 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 SEMA3FQ13275 785 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 KCNB1Q14721 858 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 ECM1Q16610 540 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 CEP55Q53EZ4 464 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 MOB2Q70IA6 237 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 ENOX1Q8TC92 643 aaKnown RBP23.94■■□□□ 1.42
SPIN3-244ENST00000640728 TRIM9Q9C026 710 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 ELP3Q9H9T3 547 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 ZNF214Q9UL59 606 aaPredicted RBP23.94■■□□□ 1.42
SPIN3-244ENST00000640728 RIPK3Q9Y572 518 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 PAPPA2Q9BXP8 1791 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 PPP1R3GB7ZBB8 358 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 STAT3P40763 770 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 SV2BQ7L1I2 683 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 ERO1BQ86YB8 467 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 CLMNQ96JQ2 1002 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 MED15Q96RN5 788 aa23.94■■□□□ 1.42
SPIN3-244ENST00000640728 MEIS1O00470 390 aa23.93■■□□□ 1.42
SPIN3-244ENST00000640728 CCT6AP40227 531 aaKnown RBP23.93■■□□□ 1.42
SPIN3-244ENST00000640728 TMEM132BQ14DG7 1078 aa23.93■■□□□ 1.42
SPIN3-244ENST00000640728 ZNF658Q5TYW1 1059 aaPredicted RBP23.93■■□□□ 1.42
SPIN3-244ENST00000640728 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.93■■□□□ 1.42
SPIN3-244ENST00000640728 LARP4BQ92615 738 aaKnown RBP23.93■■□□□ 1.42
SPIN3-244ENST00000640728 RAD54LQ92698 747 aa23.93■■□□□ 1.42
SPIN3-244ENST00000640728 VAV3Q9UKW4 847 aa23.93■■□□□ 1.42
SPIN3-244ENST00000640728 RLFQ13129 1914 aa23.93■■□□□ 1.42
SPIN3-244ENST00000640728 SPDYE16A6NNV3 312 aaPredicted RBP23.92■■□□□ 1.42
SPIN3-244ENST00000640728 PTMAP06454 111 aaKnown RBP23.92■■□□□ 1.42
SPIN3-244ENST00000640728 RPS6P62753 249 aaKnown RBP23.92■■□□□ 1.42
SPIN3-244ENST00000640728 TTLL12Q14166 644 aaPredicted RBP23.92■■□□□ 1.42
SPIN3-244ENST00000640728 KCNK18Q7Z418 384 aa23.92■■□□□ 1.42
SPIN3-244ENST00000640728 SMYD4Q8IYR2 804 aaPredicted RBP23.92■■□□□ 1.42
SPIN3-244ENST00000640728 MRFAP1L1Q96HT8 127 aa23.92■■□□□ 1.42
SPIN3-244ENST00000640728 NT5C3AQ9H0P0 336 aa23.92■■□□□ 1.42
SPIN3-244ENST00000640728 RNF146Q9NTX7 359 aa23.92■■□□□ 1.42
SPIN3-244ENST00000640728 KDM3AQ9Y4C1 1321 aa23.92■■□□□ 1.42
SPIN3-244ENST00000640728 SPDYE5A6NIY4 337 aa23.92■■□□□ 1.42
SPIN3-244ENST00000640728 IRF6O14896 467 aa23.92■■□□□ 1.42
SPIN3-244ENST00000640728 MCM6Q14566 821 aa23.92■■□□□ 1.42
SPIN3-244ENST00000640728 KMT5BQ4FZB7 885 aa23.92■■□□□ 1.42
SPIN3-244ENST00000640728 TREML2Q5T2D2 321 aa23.92■■□□□ 1.42
SPIN3-244ENST00000640728 SNRNP48Q6IEG0 339 aaKnown RBP23.92■■□□□ 1.42
SPIN3-244ENST00000640728 FANCLQ9NW38 375 aa23.92■■□□□ 1.42
SPIN3-244ENST00000640728 SCN4AP35499 1836 aa23.92■■□□□ 1.42
SPIN3-244ENST00000640728 PARP14Q460N5 1801 aa23.91■■□□□ 1.42
SPIN3-244ENST00000640728 CDC25BP30305 580 aa23.91■■□□□ 1.42
SPIN3-244ENST00000640728 SLC5A5Q92911 643 aa23.91■■□□□ 1.42
SPIN3-244ENST00000640728 STK24Q9Y6E0 443 aa23.91■■□□□ 1.42
SPIN3-244ENST00000640728 FRMPD4Q14CM0 1322 aa23.91■■□□□ 1.42
SPIN3-244ENST00000640728 A0A0G2JLL6 359 aaPredicted RBP23.91■■□□□ 1.42
SPIN3-244ENST00000640728 CXCL11O14625 94 aa23.91■■□□□ 1.42
SPIN3-244ENST00000640728 RHOBTB3O94955 611 aa23.91■■□□□ 1.42
SPIN3-244ENST00000640728 RNF207Q6ZRF8 634 aa23.91■■□□□ 1.42
SPIN3-244ENST00000640728 PRRT2Q7Z6L0 340 aaPredicted RBP23.91■■□□□ 1.42
SPIN3-244ENST00000640728 OTUD5Q96G74 571 aa23.91■■□□□ 1.42
SPIN3-244ENST00000640728 MXRA8Q9BRK3 442 aa23.91■■□□□ 1.42
SPIN3-244ENST00000640728 SETQ01105 290 aaPredicted RBP23.9■■□□□ 1.42
SPIN3-244ENST00000640728 DHX8Q14562 1220 aaKnown RBP23.9■■□□□ 1.42
SPIN3-244ENST00000640728 HAUS3Q68CZ6 603 aa23.9■■□□□ 1.42
SPIN3-244ENST00000640728 NCAPH2Q6IBW4 605 aa23.9■■□□□ 1.42
SPIN3-244ENST00000640728 SLC30A10Q6XR72 485 aa23.9■■□□□ 1.42
SPIN3-244ENST00000640728 ARMC9Q7Z3E5 817 aa23.9■■□□□ 1.42
SPIN3-244ENST00000640728 ERMNQ8TAM6 284 aa23.9■■□□□ 1.42
SPIN3-244ENST00000640728 TAAR1Q96RJ0 339 aa23.9■■□□□ 1.42
SPIN3-244ENST00000640728 TEX13BQ9BXU2 312 aa23.9■■□□□ 1.42
SPIN3-244ENST00000640728 OTOFQ9HC10 1997 aa23.89■■□□□ 1.42
SPIN3-244ENST00000640728 MED24O75448 989 aa23.89■■□□□ 1.42
SPIN3-244ENST00000640728 PSMD10O75832 226 aa23.89■■□□□ 1.42
SPIN3-244ENST00000640728 HOXA7P31268 230 aaPredicted RBP23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms