RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 DEAF1O75398 565 aaPredicted RBP8.98□□□□□ -0.97
NECAP1-227ENST00000640648 CALML3P27482 149 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 SERPINB4P48594 390 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 RAD23BP54727 409 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 MFSD4BQ5TF39 518 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 UBL4BQ8N7F7 174 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 WDR60Q8WVS4 1066 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 MAP4K1Q92918 833 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 NAF1Q96HR8 494 aaKnown RBP8.98□□□□□ -0.97
NECAP1-227ENST00000640648 DNM2P50570 870 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 SNX1Q13596 522 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 SLC9C1Q4G0N8 1177 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 C11orf57Q6ZUT1 292 aaPredicted RBP8.98□□□□□ -0.97
NECAP1-227ENST00000640648 MAB21L3Q8N8X9 362 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 RPGRQ92834 1020 aaKnown RBP8.98□□□□□ -0.97
NECAP1-227ENST00000640648 BTBD7Q9P203 1132 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 RAB21Q9UL25 225 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 RTL9Q8NET4 1388 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 CCT8L1PA6NM43 557 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 DEXIO95424 95 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 KRT5P13647 590 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 GNAT2P19087 354 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 TNNI2P48788 182 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 HDAC4P56524 1084 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 TSC22D1Q15714 1073 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 CADPS2Q86UW7 1296 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 WDR75Q8IWA0 830 aaKnown RBP8.98□□□□□ -0.97
NECAP1-227ENST00000640648 SAP30BPQ9UHR5 308 aaKnown RBP8.98□□□□□ -0.97
NECAP1-227ENST00000640648 SERTAD1Q9UHV2 236 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 CEP170Q5SW79 1584 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 CCDC162PA2VCL2 907 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 SMIM23A6NLE4 172 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 F8W031 263 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-227ENST00000640648 O00370 1275 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 TAF5LO75529 589 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 MAGEA1P43355 309 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 GOLGA8FQ08AF8 430 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 GOLGA8DPQ0D2H9 430 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 DIXDC1Q155Q3 683 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 GSTA3Q16772 222 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 STXBP4Q6ZWJ1 553 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 SLC35F6Q8N357 371 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 MORC4Q8TE76 937 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 CLIC6Q96NY7 704 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 PHF23Q9BUL5 403 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-227ENST00000640648 ZCCHC17Q9NP64 241 aaKnown RBP8.97□□□□□ -0.97
NECAP1-227ENST00000640648 CLASP1Q7Z460 1538 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 ARHGEF10O15013 1369 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 LSM1O15116 133 aaKnown RBP8.97□□□□□ -0.97
NECAP1-227ENST00000640648 HSPD1P10809 573 aaKnown RBP8.97□□□□□ -0.97
NECAP1-227ENST00000640648 ACADVLP49748 655 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 STAT2P52630 851 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 SKOR1P84550 965 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 LBRQ14739 615 aaKnown RBP8.97□□□□□ -0.97
NECAP1-227ENST00000640648 LETM2Q2VYF4 491 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 NANOGNBQ7Z5D8 188 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 GRK7Q8WTQ7 553 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 FAM129AQ9BZQ8 928 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 KCNF1Q9H3M0 494 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 SLC52A2Q9HAB3 445 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 LRCH1Q9Y2L9 728 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 ARIH1Q9Y4X5 557 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-227ENST00000640648 A0A1B0GW55 424 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 P4HA2O15460 535 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 STK10O94804 968 aaKnown RBP8.97□□□□□ -0.97
NECAP1-227ENST00000640648 DUX4L2P0CJ85 424 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 DUX4L3P0CJ86 424 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 DUX4L4P0CJ87 422 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 DUX4L5P0CJ88 424 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 DUX4L6P0CJ89 424 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 DUX4L7P0CJ90 424 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 KCNA3P22001 575 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 GNAQP50148 359 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 TSPAN18Q96SJ8 248 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 SERPINI1Q99574 410 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 DDX23Q9BUQ8 820 aaKnown RBP8.97□□□□□ -0.97
NECAP1-227ENST00000640648 BLZF1Q9H2G9 400 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 FANCLQ9NW38 375 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 DUX4Q9UBX2 424 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 CLIC4Q9Y696 253 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.97□□□□□ -0.97
NECAP1-227ENST00000640648 POTEB3A0JP26 581 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 PLEKHG3A1L390 1219 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 E9PMD0 336 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 KRT38O76015 456 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 ANP32DO95626 131 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 CYP21A2P08686 494 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 PDCLQ13371 301 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 POTEBQ6S5H4 581 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 TRIML2Q8N7C3 387 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 DDHD1Q8NEL9 900 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 DSCC1Q9BVC3 393 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 DBNLQ9UJU6 430 aaKnown RBP8.97□□□□□ -0.97
NECAP1-227ENST00000640648 ARL2BPQ9Y2Y0 163 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 SAMD9LQ8IVG5 1584 aa8.97□□□□□ -0.97
NECAP1-227ENST00000640648 CLASP2O75122 1294 aaKnown RBP8.96□□□□□ -0.97
NECAP1-227ENST00000640648 CALM1P0DP23 149 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 CALM2P0DP24 149 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 CALM3P0DP25 149 aa8.96□□□□□ -0.97
NECAP1-227ENST00000640648 IL2RBP14784 551 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms