RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 RACK1P63244 317 aaKnown RBP6.29□□□□□ -1.4
AP3S1-209ENST00000640413 INF2Q27J81 1249 aa6.29□□□□□ -1.4
AP3S1-209ENST00000640413 MILR1Q7Z6M3 343 aa6.29□□□□□ -1.4
AP3S1-209ENST00000640413 ZC3H18Q86VM9 953 aaKnown RBP6.29□□□□□ -1.4
AP3S1-209ENST00000640413 SEC14L1Q92503 715 aa6.29□□□□□ -1.4
AP3S1-209ENST00000640413 MMP19Q99542 508 aa6.29□□□□□ -1.4
AP3S1-209ENST00000640413 MENTQ9BUN1 341 aa6.29□□□□□ -1.4
AP3S1-209ENST00000640413 KLC2Q9H0B6 622 aa6.29□□□□□ -1.4
AP3S1-209ENST00000640413 AKT3Q9Y243 479 aa6.29□□□□□ -1.4
AP3S1-209ENST00000640413 NPEPPSL1A6NEC2 478 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 KCNH1O95259 989 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 FANCCQ00597 558 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 SCRN1Q12765 414 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 ADAM9Q13443 819 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 PRAMEF18Q5VWM3 479 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 PALM2Q8IXS6 379 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 FAM126BQ8IXS8 530 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 ZNF513Q8N8E2 541 aaPredicted RBP6.28□□□□□ -1.4
AP3S1-209ENST00000640413 COPS5Q92905 334 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 ZNF747Q9BV97 191 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 BCL11AQ9H165 835 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 VPS11Q9H270 941 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 CD248Q9HCU0 757 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 APEX2Q9UBZ4 518 aa6.28□□□□□ -1.4
AP3S1-209ENST00000640413 CYR61O00622 381 aa6.27□□□□□ -1.41
AP3S1-209ENST00000640413 GPR42O15529 346 aa6.27□□□□□ -1.41
AP3S1-209ENST00000640413 AMHP03971 560 aa6.27□□□□□ -1.41
AP3S1-209ENST00000640413 CYP1A1P04798 512 aaPredicted RBP6.27□□□□□ -1.41
AP3S1-209ENST00000640413 ZNF28P17035 718 aa6.27□□□□□ -1.41
AP3S1-209ENST00000640413 FPR2P25090 351 aa6.27□□□□□ -1.41
AP3S1-209ENST00000640413 EIF6P56537 245 aaKnown RBP6.27□□□□□ -1.41
AP3S1-209ENST00000640413 SURF1Q15526 300 aa6.27□□□□□ -1.41
AP3S1-209ENST00000640413 CR1LQ2VPA4 569 aa6.27□□□□□ -1.41
AP3S1-209ENST00000640413 ZNF585AQ6P3V2 769 aa6.27□□□□□ -1.41
AP3S1-209ENST00000640413 ZSWIM3Q96MP5 696 aa6.27□□□□□ -1.41
AP3S1-209ENST00000640413 BACH2Q9BYV9 841 aa6.27□□□□□ -1.41
AP3S1-209ENST00000640413 C9orf118A6NHY6 69 aa6.26□□□□□ -1.41
AP3S1-209ENST00000640413 PPP2R5EQ16537 467 aa6.26□□□□□ -1.41
AP3S1-209ENST00000640413 MBD6Q96DN6 1003 aa6.26□□□□□ -1.41
AP3S1-209ENST00000640413 EFR3BQ9Y2G0 817 aa6.26□□□□□ -1.41
AP3S1-209ENST00000640413 FZD7O75084 574 aa6.25□□□□□ -1.41
AP3S1-209ENST00000640413 IL13P35225 146 aa6.25□□□□□ -1.41
AP3S1-209ENST00000640413 GIPRP48546 466 aa6.25□□□□□ -1.41
AP3S1-209ENST00000640413 KIAA1211LQ6NV74 962 aa6.25□□□□□ -1.41
AP3S1-209ENST00000640413 PLEKHH3Q7Z736 793 aa6.25□□□□□ -1.41
AP3S1-209ENST00000640413 C19orf47Q8N9M1 422 aaKnown RBP6.25□□□□□ -1.41
AP3S1-209ENST00000640413 IGDCC4Q8TDY8 1250 aa6.25□□□□□ -1.41
AP3S1-209ENST00000640413 PTPN18Q99952 460 aa6.25□□□□□ -1.41
AP3S1-209ENST00000640413 DEF6Q9H4E7 631 aa6.25□□□□□ -1.41
AP3S1-209ENST00000640413 DDX41Q9UJV9 622 aaKnown RBP6.25□□□□□ -1.41
AP3S1-209ENST00000640413 EMC9Q9Y3B6 208 aa6.25□□□□□ -1.41
AP3S1-209ENST00000640413 SLC6A11P48066 632 aa6.24□□□□□ -1.41
AP3S1-209ENST00000640413 MLLT6P55198 1093 aaPredicted RBP6.24□□□□□ -1.41
AP3S1-209ENST00000640413 NKX3-2P78367 333 aa6.24□□□□□ -1.41
AP3S1-209ENST00000640413 PAK2Q13177 524 aa6.24□□□□□ -1.41
AP3S1-209ENST00000640413 CEP68Q76N32 757 aa6.24□□□□□ -1.41
AP3S1-209ENST00000640413 CIR1Q86X95 450 aaPredicted RBP6.24□□□□□ -1.41
AP3S1-209ENST00000640413 DNERQ8NFT8 737 aa6.24□□□□□ -1.41
AP3S1-209ENST00000640413 YTHDC1Q96MU7 727 aaKnown RBP6.24□□□□□ -1.41
AP3S1-209ENST00000640413 CDK5RAP1Q96SZ6 601 aaKnown RBP6.24□□□□□ -1.41
AP3S1-209ENST00000640413 YIPF4Q9BSR8 244 aa6.24□□□□□ -1.41
AP3S1-209ENST00000640413 LGR4Q9BXB1 951 aa6.24□□□□□ -1.41
AP3S1-209ENST00000640413 TMEM168Q9H0V1 697 aa6.24□□□□□ -1.41
AP3S1-209ENST00000640413 L2HGDHQ9H9P8 463 aa6.24□□□□□ -1.41
AP3S1-209ENST00000640413 JADE2Q9NQC1 790 aa6.24□□□□□ -1.41
AP3S1-209ENST00000640413 HS3ST3A1Q9Y663 406 aa6.24□□□□□ -1.41
AP3S1-209ENST00000640413 ANKRD34BA5PLL1 514 aa6.23□□□□□ -1.41
AP3S1-209ENST00000640413 SOX9P48436 509 aa6.23□□□□□ -1.41
AP3S1-209ENST00000640413 PPP2CBP62714 309 aa6.23□□□□□ -1.41
AP3S1-209ENST00000640413 PPP2CAP67775 309 aa6.23□□□□□ -1.41
AP3S1-209ENST00000640413 CYP4F3Q08477 520 aa6.23□□□□□ -1.41
AP3S1-209ENST00000640413 COL9A2Q14055 689 aaPredicted RBP6.23□□□□□ -1.41
AP3S1-209ENST00000640413 USP51Q70EK9 711 aa6.23□□□□□ -1.41
AP3S1-209ENST00000640413 FRS2Q8WU20 508 aa6.23□□□□□ -1.41
AP3S1-209ENST00000640413 SLITRK6Q9H5Y7 841 aa6.23□□□□□ -1.41
AP3S1-209ENST00000640413 NGRNQ9NPE2 291 aaKnown RBP6.23□□□□□ -1.41
AP3S1-209ENST00000640413 CROTQ9UKG9 612 aa6.23□□□□□ -1.41
AP3S1-209ENST00000640413 BCL6P41182 706 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 RPL11P62913 178 aaKnown RBP6.22□□□□□ -1.41
AP3S1-209ENST00000640413 CRB2Q5IJ48 1285 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 MROH9Q5TGP6 573 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 GTF2IRD2BQ6EKJ0 949 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 VHLLQ6RSH7 139 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 ARHGEF18Q6ZSZ5 1173 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 GTF2IRD2Q86UP8 949 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 NLRP10Q86W26 655 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 KBTBD2Q8IY47 623 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 BVESQ8NE79 360 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 TRMT2BQ96GJ1 504 aaKnown RBP6.22□□□□□ -1.41
AP3S1-209ENST00000640413 WWC2-AS2Q96NR7 200 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 APBA2Q99767 749 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 PCED1AQ9H1Q7 454 aa6.22□□□□□ -1.41
AP3S1-209ENST00000640413 METTL5Q9NRN9 209 aaKnown RBP6.22□□□□□ -1.41
AP3S1-209ENST00000640413 TIMM13Q9Y5L4 95 aaPredicted RBP6.22□□□□□ -1.41
AP3S1-209ENST00000640413 ARNTLO00327 626 aa6.21□□□□□ -1.42
AP3S1-209ENST00000640413 B4GALT4O60513 344 aa6.21□□□□□ -1.42
AP3S1-209ENST00000640413 ZNF16P17020 682 aaPredicted RBP6.21□□□□□ -1.42
AP3S1-209ENST00000640413 EPHB4P54760 987 aa6.21□□□□□ -1.42
AP3S1-209ENST00000640413 RBM10P98175 930 aaKnown RBP6.21□□□□□ -1.42
AP3S1-209ENST00000640413 KLF10Q13118 480 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms