RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 H7BY64 318 aa8.13□□□□□ -1.11
RTTN-217ENST00000640393 APPP05067 770 aa8.13□□□□□ -1.11
RTTN-217ENST00000640393 GRK2P25098 689 aa8.13□□□□□ -1.11
RTTN-217ENST00000640393 GRK3P35626 688 aa8.13□□□□□ -1.11
RTTN-217ENST00000640393 SRSF3P84103 164 aaKnown RBP8.13□□□□□ -1.11
RTTN-217ENST00000640393 PRR5P85299 388 aa8.13□□□□□ -1.11
RTTN-217ENST00000640393 PABPC4Q13310 644 aaKnown RBP eCLIP8.13□□□□□ -1.11
RTTN-217ENST00000640393 IRF2BP1Q8IU81 584 aa8.13□□□□□ -1.11
RTTN-217ENST00000640393 DHX37Q8IY37 1157 aaKnown RBP8.13□□□□□ -1.11
RTTN-217ENST00000640393 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.13□□□□□ -1.11
RTTN-217ENST00000640393 SCLYQ96I15 445 aa8.13□□□□□ -1.11
RTTN-217ENST00000640393 MRPL4Q9BYD3 311 aaKnown RBP8.13□□□□□ -1.11
RTTN-217ENST00000640393 EPB41L4BQ9H329 900 aa8.13□□□□□ -1.11
RTTN-217ENST00000640393 RNF114Q9Y508 228 aa8.13□□□□□ -1.11
RTTN-217ENST00000640393 EFCAB14O75071 495 aa8.12□□□□□ -1.11
RTTN-217ENST00000640393 DGKIO75912 1065 aa8.12□□□□□ -1.11
RTTN-217ENST00000640393 CYBBP04839 570 aa8.12□□□□□ -1.11
RTTN-217ENST00000640393 VIPR1P32241 457 aa8.12□□□□□ -1.11
RTTN-217ENST00000640393 DNM2P50570 870 aa8.12□□□□□ -1.11
RTTN-217ENST00000640393 PAK1Q13153 545 aa8.12□□□□□ -1.11
RTTN-217ENST00000640393 TMC6Q7Z403 805 aa8.12□□□□□ -1.11
RTTN-217ENST00000640393 SGPP1Q9BX95 441 aa8.12□□□□□ -1.11
RTTN-217ENST00000640393 ZNF552Q9H707 407 aaPredicted RBP8.12□□□□□ -1.11
RTTN-217ENST00000640393 CATSPERZQ9NTU4 200 aa8.12□□□□□ -1.11
RTTN-217ENST00000640393 X6R8D5 127 aa8.12□□□□□ -1.11
RTTN-217ENST00000640393 FAM47E-STBD1D6RA91 191 aa8.11□□□□□ -1.11
RTTN-217ENST00000640393 PYGMP11217 842 aa8.11□□□□□ -1.11
RTTN-217ENST00000640393 SDSP20132 328 aa8.11□□□□□ -1.11
RTTN-217ENST00000640393 NR1I3Q14994 352 aa8.11□□□□□ -1.11
RTTN-217ENST00000640393 MROH9Q5TGP6 573 aa8.11□□□□□ -1.11
RTTN-217ENST00000640393 MILR1Q7Z6M3 343 aa8.11□□□□□ -1.11
RTTN-217ENST00000640393 RBM12BQ8IXT5 1001 aaKnown RBP8.11□□□□□ -1.11
RTTN-217ENST00000640393 CDIP1Q9H305 208 aa8.11□□□□□ -1.11
RTTN-217ENST00000640393 SIRT5Q9NXA8 310 aa8.11□□□□□ -1.11
RTTN-217ENST00000640393 GNAT1P11488 350 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 NCKAP1LP55160 1127 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 ST5P78524 1137 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 FNDC3BQ53EP0 1204 aaKnown RBP8.1□□□□□ -1.11
RTTN-217ENST00000640393 ZC3H14Q6PJT7 736 aaKnown RBP8.1□□□□□ -1.11
RTTN-217ENST00000640393 GSTCDQ8NEC7 633 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 PCDH19Q8TAB3 1148 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 PIP4K2CQ8TBX8 421 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 KCNN1Q92952 543 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 TRIM39Q9HCM9 518 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 NUDT5Q9UKK9 219 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 PLA2G2DQ9UNK4 145 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 COQ6Q9Y2Z9 468 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 MYOCOSA0A1B0GUC4 107 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 LOC105371045A0A1W2PR82 267 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 IRS4O14654 1257 aaPredicted RBP8.1□□□□□ -1.11
RTTN-217ENST00000640393 SGSM2O43147 1006 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 OPA1O60313 960 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 CLSTN1O94985 981 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 ZNF200P98182 395 aaPredicted RBP8.1□□□□□ -1.11
RTTN-217ENST00000640393 PLEKHN1Q494U1 663 aaPredicted RBP8.1□□□□□ -1.11
RTTN-217ENST00000640393 TRIM61Q5EBN2 209 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 STEAP3Q658P3 488 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 CNNM4Q6P4Q7 775 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.1□□□□□ -1.11
RTTN-217ENST00000640393 PEX11GQ96HA9 241 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 MCOLN1Q9GZU1 580 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 AP5M1Q9H0R1 490 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 EPB41L1Q9H4G0 881 aa8.1□□□□□ -1.11
RTTN-217ENST00000640393 TNPO3Q9Y5L0 923 aaKnown RBP8.1□□□□□ -1.11
RTTN-217ENST00000640393 TCRBV16S1A1N1A0A5B0 115 aa8.09□□□□□ -1.12
RTTN-217ENST00000640393 ENPP3O14638 875 aa8.09□□□□□ -1.12
RTTN-217ENST00000640393 NKRFO15226 690 aaKnown RBP eCLIP8.09□□□□□ -1.12
RTTN-217ENST00000640393 SRGAP3O43295 1099 aa8.09□□□□□ -1.12
RTTN-217ENST00000640393 KRT15P19012 456 aa8.09□□□□□ -1.12
RTTN-217ENST00000640393 GYS2P54840 703 aa8.09□□□□□ -1.12
RTTN-217ENST00000640393 TMEM62Q0P6H9 643 aa8.09□□□□□ -1.12
RTTN-217ENST00000640393 OSTM1Q86WC4 334 aa8.09□□□□□ -1.12
RTTN-217ENST00000640393 DCP2Q8IU60 420 aaKnown RBP8.09□□□□□ -1.12
RTTN-217ENST00000640393 NETO2Q8NC67 525 aa8.09□□□□□ -1.12
RTTN-217ENST00000640393 FBXW5Q969U6 566 aa8.09□□□□□ -1.12
RTTN-217ENST00000640393 PALD1Q9ULE6 856 aa8.09□□□□□ -1.12
RTTN-217ENST00000640393 ABLIM1O14639 778 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 KCNK3O14649 394 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 HGSO14964 777 aaPredicted RBP8.08□□□□□ -1.12
RTTN-217ENST00000640393 SLC27A2O14975 620 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 PAX4O43316 350 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 DNAJC8O75937 253 aaPredicted RBP8.08□□□□□ -1.12
RTTN-217ENST00000640393 NAT1P18440 290 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 HSD3B2P26439 372 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 MAPKAPK2P49137 400 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 SPIRE1Q08AE8 756 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 ZNF460Q14592 562 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 SYDE1Q6ZW31 735 aaPredicted RBP8.08□□□□□ -1.12
RTTN-217ENST00000640393 RIOX2Q8IUF8 465 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 SYNPOQ8N3V7 929 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 FBXO15Q8NCQ5 510 aaPredicted RBP8.08□□□□□ -1.12
RTTN-217ENST00000640393 ALG3Q92685 438 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 FEZ1Q99689 392 aa8.08□□□□□ -1.12
RTTN-217ENST00000640393 CCDC66A2RUB6 948 aa8.07□□□□□ -1.12
RTTN-217ENST00000640393 ARVCFO00192 962 aa8.07□□□□□ -1.12
RTTN-217ENST00000640393 YBX1P67809 324 aaKnown RBP8.07□□□□□ -1.12
RTTN-217ENST00000640393 DALRD3Q5D0E6 543 aaKnown RBP8.07□□□□□ -1.12
RTTN-217ENST00000640393 ZNF648Q5T619 568 aaPredicted RBP8.07□□□□□ -1.12
RTTN-217ENST00000640393 EP400NLQ6ZTU2 488 aa8.07□□□□□ -1.12
RTTN-217ENST00000640393 OTOP3Q7RTS5 596 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms