RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 ADD3Q9UEY8 706 aaKnown RBP16.15■□□□□ 0.18
HLA-C-210ENST00000640219 INSL6Q9Y581 213 aa16.15■□□□□ 0.18
HLA-C-210ENST00000640219 A6NJR5 290 aa16.14■□□□□ 0.17
HLA-C-210ENST00000640219 NKRFO15226 690 aaKnown RBP eCLIP16.14■□□□□ 0.17
HLA-C-210ENST00000640219 GFRA3O60609 400 aa16.14■□□□□ 0.17
HLA-C-210ENST00000640219 NBNO60934 754 aa16.14■□□□□ 0.17
HLA-C-210ENST00000640219 ALDH5A1P51649 535 aaPredicted RBP16.14■□□□□ 0.17
HLA-C-210ENST00000640219 BMP8AQ7Z5Y6 402 aa16.14■□□□□ 0.17
HLA-C-210ENST00000640219 ZNF589Q86UQ0 364 aaPredicted RBP16.14■□□□□ 0.17
HLA-C-210ENST00000640219 CHMP4CQ96CF2 233 aa16.14■□□□□ 0.17
HLA-C-210ENST00000640219 EVI5LQ96CN4 794 aa16.14■□□□□ 0.17
HLA-C-210ENST00000640219 POP1Q99575 1024 aaKnown RBP16.14■□□□□ 0.17
HLA-C-210ENST00000640219 INCENPQ9NQS7 918 aa16.14■□□□□ 0.17
HLA-C-210ENST00000640219 CFAP54Q96N23 3096 aa16.13■□□□□ 0.17
HLA-C-210ENST00000640219 TRIP12Q14669 1992 aaPredicted RBP16.13■□□□□ 0.17
HLA-C-210ENST00000640219 BAATQ14032 418 aaPredicted RBP16.13■□□□□ 0.17
HLA-C-210ENST00000640219 NBR1Q14596 966 aa16.13■□□□□ 0.17
HLA-C-210ENST00000640219 PPP2R5BQ15173 497 aa16.13■□□□□ 0.17
HLA-C-210ENST00000640219 EPC2Q52LR7 807 aa16.13■□□□□ 0.17
HLA-C-210ENST00000640219 GDF6Q6KF10 455 aaPredicted RBP16.13■□□□□ 0.17
HLA-C-210ENST00000640219 RNF135Q8IUD6 432 aa16.13■□□□□ 0.17
HLA-C-210ENST00000640219 IFNL3Q8IZI9 196 aa16.13■□□□□ 0.17
HLA-C-210ENST00000640219 EDAQ92838 391 aa16.13■□□□□ 0.17
HLA-C-210ENST00000640219 CTAGE1Q96RT6 745 aa16.13■□□□□ 0.17
HLA-C-210ENST00000640219 CLDND1Q9NY35 253 aa16.13■□□□□ 0.17
HLA-C-210ENST00000640219 CCPG1Q9ULG6 757 aa16.13■□□□□ 0.17
HLA-C-210ENST00000640219 TRIOO75962 3097 aa16.13■□□□□ 0.17
HLA-C-210ENST00000640219 LOC102724159A0A0B4J2E5 919 aa16.12■□□□□ 0.17
HLA-C-210ENST00000640219 CKBP12277 381 aa16.12■□□□□ 0.17
HLA-C-210ENST00000640219 SLC1A4P43007 532 aa16.12■□□□□ 0.17
HLA-C-210ENST00000640219 TCF15Q12870 199 aa16.12■□□□□ 0.17
HLA-C-210ENST00000640219 GPM6BQ13491 265 aa16.12■□□□□ 0.17
HLA-C-210ENST00000640219 COL19A1Q14993 1142 aa16.12■□□□□ 0.17
HLA-C-210ENST00000640219 PWP2Q15269 919 aaKnown RBP16.12■□□□□ 0.17
HLA-C-210ENST00000640219 PKN1Q16512 942 aa16.12■□□□□ 0.17
HLA-C-210ENST00000640219 DHX38Q92620 1227 aaKnown RBP16.12■□□□□ 0.17
HLA-C-210ENST00000640219 COPS5Q92905 334 aa16.12■□□□□ 0.17
HLA-C-210ENST00000640219 PBXIP1Q96AQ6 731 aa16.12■□□□□ 0.17
HLA-C-210ENST00000640219 GMCL1Q96IK5 515 aa16.12■□□□□ 0.17
HLA-C-210ENST00000640219 SAMD11Q96NU1 681 aa16.12■□□□□ 0.17
HLA-C-210ENST00000640219 NSUN3Q9H649 340 aaKnown RBP16.12■□□□□ 0.17
HLA-C-210ENST00000640219 ZNF287Q9HBT7 754 aa16.12■□□□□ 0.17
HLA-C-210ENST00000640219 PATL2C9JE40 543 aaKnown RBP16.11■□□□□ 0.17
HLA-C-210ENST00000640219 H3BNC9 293 aa16.11■□□□□ 0.17
HLA-C-210ENST00000640219 PLA2G6O60733 806 aa16.11■□□□□ 0.17
HLA-C-210ENST00000640219 GSPT1P15170 499 aaKnown RBP16.11■□□□□ 0.17
HLA-C-210ENST00000640219 MCCP23508 829 aa16.11■□□□□ 0.17
HLA-C-210ENST00000640219 CTDSPL2Q05D32 466 aa16.11■□□□□ 0.17
HLA-C-210ENST00000640219 RBL2Q08999 1139 aa16.11■□□□□ 0.17
HLA-C-210ENST00000640219 SMAD2Q15796 467 aaKnown RBP16.11■□□□□ 0.17
HLA-C-210ENST00000640219 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.11■□□□□ 0.175e-7■■■■□ 21.8
HLA-C-210ENST00000640219 SCFD2Q8WU76 684 aa16.11■□□□□ 0.17
HLA-C-210ENST00000640219 IL25Q9H293 177 aa16.11■□□□□ 0.17
HLA-C-210ENST00000640219 PRR12Q9ULL5 1215 aa16.11■□□□□ 0.17
HLA-C-210ENST00000640219 LCTP09848 1927 aa16.11■□□□□ 0.17
HLA-C-210ENST00000640219 TMEM221A6NGB7 291 aa16.1■□□□□ 0.17
HLA-C-210ENST00000640219 M0R296 226 aa16.1■□□□□ 0.17
HLA-C-210ENST00000640219 HTRA4P83105 476 aaPredicted RBP16.1■□□□□ 0.17
HLA-C-210ENST00000640219 PDE4DQ08499 809 aa16.1■□□□□ 0.17
HLA-C-210ENST00000640219 GIMAP6Q6P9H5 292 aa16.1■□□□□ 0.17
HLA-C-210ENST00000640219 KCTD1Q719H9 257 aa16.1■□□□□ 0.17
HLA-C-210ENST00000640219 RPAINQ86UA6 219 aa16.1■□□□□ 0.17
HLA-C-210ENST00000640219 SESTD1Q86VW0 696 aa16.1■□□□□ 0.17
HLA-C-210ENST00000640219 SUGP1Q8IWZ8 645 aaKnown RBP16.1■□□□□ 0.17
HLA-C-210ENST00000640219 SP7Q8TDD2 431 aaPredicted RBP16.1■□□□□ 0.17
HLA-C-210ENST00000640219 NAPBQ9H115 298 aa16.1■□□□□ 0.17
HLA-C-210ENST00000640219 FAM86C1Q9NVL1 165 aa16.1■□□□□ 0.17
HLA-C-210ENST00000640219 CACNA1AO00555 2505 aa16.1■□□□□ 0.17
HLA-C-210ENST00000640219 TECTAO75443 2155 aa16.1■□□□□ 0.17
HLA-C-210ENST00000640219 PTPDC1A2A3K4 754 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 MBTPS2O43462 519 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 NCK2O43639 380 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 AMHP03971 560 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 ICAM1P05362 532 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 TSPY3P0CV98 308 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 TSPY8P0CW00 308 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 TXNP10599 105 aaKnown RBP16.09■□□□□ 0.17
HLA-C-210ENST00000640219 LTBRP36941 435 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 CLUL1Q15846 466 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 RCSD1Q6JBY9 416 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 TRIM67Q6ZTA4 783 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 MYOCDQ8IZQ8 938 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 NEDD1Q8NHV4 660 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 OSBPL3Q9H4L5 887 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 ZDBF2Q9HCK1 2354 aa16.09■□□□□ 0.17
HLA-C-210ENST00000640219 RBAK-RBAKDNI3L0D1 243 aa16.08■□□□□ 0.16
HLA-C-210ENST00000640219 NFIBO00712 420 aa16.08■□□□□ 0.16
HLA-C-210ENST00000640219 GNAT2P19087 354 aa16.08■□□□□ 0.16
HLA-C-210ENST00000640219 SDSP20132 328 aa16.08■□□□□ 0.16
HLA-C-210ENST00000640219 CALML3P27482 149 aa16.08■□□□□ 0.16
HLA-C-210ENST00000640219 PDE4BQ07343 736 aa16.08■□□□□ 0.16
HLA-C-210ENST00000640219 PPARAQ07869 468 aa16.08■□□□□ 0.16
HLA-C-210ENST00000640219 TMEM192Q8IY95 271 aa16.08■□□□□ 0.16
HLA-C-210ENST00000640219 MPHOSPH6Q99547 160 aaKnown RBP16.08■□□□□ 0.16
HLA-C-210ENST00000640219 ZFHX2Q9C0A1 2572 aaPredicted RBP16.08■□□□□ 0.16
HLA-C-210ENST00000640219 STXBP3O00186 592 aa16.07■□□□□ 0.16
HLA-C-210ENST00000640219 LGR5O75473 907 aa16.07■□□□□ 0.16
HLA-C-210ENST00000640219 DEKP35659 375 aaKnown RBP16.07■□□□□ 0.16
HLA-C-210ENST00000640219 HAND2P61296 217 aa16.07■□□□□ 0.16
HLA-C-210ENST00000640219 CTC1Q2NKJ3 1217 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms