RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 SF3B6Q9Y3B4 125 aaKnown RBP8.5□□□□□ -1.05
RFC1-217ENST00000639695 PHLDB1Q86UU1 1377 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 A0A0G2JLL6 359 aaPredicted RBP8.49□□□□□ -1.05
RFC1-217ENST00000639695 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.49□□□□□ -1.05
RFC1-217ENST00000639695 SHOXO15266 292 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 TPD52L2O43399 206 aaKnown RBP8.49□□□□□ -1.05
RFC1-217ENST00000639695 KATNA1O75449 491 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 ITKQ08881 620 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 GRB10Q13322 594 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 PPP2R5DQ14738 602 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 PCBP1Q15365 356 aaKnown RBP eCLIP8.49□□□□□ -1.05
RFC1-217ENST00000639695 NFE2Q16621 373 aaPredicted RBP8.49□□□□□ -1.05
RFC1-217ENST00000639695 RNF141Q8WVD5 230 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 BRF1Q92994 677 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 SHISA4Q96DD7 197 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 VWCEQ96DN2 955 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 INTS4Q96HW7 963 aaKnown RBP8.49□□□□□ -1.05
RFC1-217ENST00000639695 TTC1Q99614 292 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 NKX2-4Q9H2Z4 354 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 NOL6Q9H6R4 1146 aaKnown RBP8.49□□□□□ -1.05
RFC1-217ENST00000639695 CYP26B1Q9NR63 512 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 GPATCH2Q9NW75 528 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 PRR13Q9NZ81 148 aa8.49□□□□□ -1.05
RFC1-217ENST00000639695 YBX2Q9Y2T7 364 aaKnown RBP8.49□□□□□ -1.05
RFC1-217ENST00000639695 ADAMTS20P59510 1910 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 SHISA3A0PJX4 238 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 KPNA6O60684 536 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 JMJD7P0C870 316 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 BMP7P18075 431 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 LTKP29376 864 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 SCNN1BP51168 640 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 GFRA1P56159 465 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 PKN3Q6P5Z2 889 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 LILRA2Q8N149 483 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 FIBCD1Q8N539 461 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 OR2W6PQ8NHA6 318 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 DSCC1Q9BVC3 393 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 PUS7LQ9H0K6 701 aaKnown RBP8.48□□□□□ -1.05
RFC1-217ENST00000639695 SLC6A17Q9H1V8 727 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 RIPOR2Q9Y4F9 1068 aa8.48□□□□□ -1.05
RFC1-217ENST00000639695 FITM1A5D6W6 292 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 NOTOA8MTQ0 251 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 AQP7O14520 342 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 GPR39O43194 453 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 TSPAN6O43657 245 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 ZEB2O60315 1214 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 PSPNO60542 156 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 PEX14O75381 377 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 AMPD2Q01433 879 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 STAT4Q14765 748 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 SART3Q15020 963 aaKnown RBP8.47□□□□□ -1.05
RFC1-217ENST00000639695 NR0B2Q15466 257 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 GORABQ5T7V8 394 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 FGD2Q7Z6J4 655 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 WNK4Q96J92 1243 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 MTFR1LQ9H019 292 aa8.47□□□□□ -1.05
RFC1-217ENST00000639695 ZNF552Q9H707 407 aaPredicted RBP8.47□□□□□ -1.05
RFC1-217ENST00000639695 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.47□□□□□ -1.05
RFC1-217ENST00000639695 TCRBV16S1A1N1A0A5B0 115 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 BLACEA4D250 179 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 PEX10O60683 326 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 SCG5P05408 212 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 ECI1P42126 302 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 TEKQ02763 1124 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 ZNF460Q14592 562 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 SSPNQ14714 243 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 SF1Q15637 639 aaKnown RBP8.46□□□□□ -1.06
RFC1-217ENST00000639695 USP53Q70EK8 1073 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 SPATS2Q86XZ4 545 aaKnown RBP8.46□□□□□ -1.06
RFC1-217ENST00000639695 RAVER1Q8IY67 606 aaKnown RBP8.46□□□□□ -1.06
RFC1-217ENST00000639695 OXR1Q8N573 874 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 TMEM145Q8NBT3 493 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 DCAF4Q8WV16 495 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 TSR2Q969E8 191 aaKnown RBP8.46□□□□□ -1.06
RFC1-217ENST00000639695 MTMR8Q96EF0 704 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 SCLYQ96I15 445 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 ASPSCR1Q9BZE9 553 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 IFT22Q9H7X7 185 aa8.46□□□□□ -1.06
RFC1-217ENST00000639695 FAM83GA6ND36 823 aa8.45□□□□□ -1.06
RFC1-217ENST00000639695 SEMA7AO75326 666 aa8.45□□□□□ -1.06
RFC1-217ENST00000639695 NEK2P51955 445 aa8.45□□□□□ -1.06
RFC1-217ENST00000639695 MCL1Q07820 350 aa8.45□□□□□ -1.06
RFC1-217ENST00000639695 CDCA2Q69YH5 1023 aaPredicted RBP8.45□□□□□ -1.06
RFC1-217ENST00000639695 DDX53Q86TM3 631 aaKnown RBP8.45□□□□□ -1.06
RFC1-217ENST00000639695 ZDHHC15Q96MV8 337 aa8.45□□□□□ -1.06
RFC1-217ENST00000639695 KCNC2Q96PR1 638 aa8.45□□□□□ -1.06
RFC1-217ENST00000639695 G6PC3Q9BUM1 346 aa8.45□□□□□ -1.06
RFC1-217ENST00000639695 PRDM14Q9GZV8 571 aa8.45□□□□□ -1.06
RFC1-217ENST00000639695 ASCC2Q9H1I8 757 aaPredicted RBP8.45□□□□□ -1.06
RFC1-217ENST00000639695 GPR160Q9UJ42 338 aa8.45□□□□□ -1.06
RFC1-217ENST00000639695 SPEF1Q9Y4P9 236 aa8.45□□□□□ -1.06
RFC1-217ENST00000639695 LOC102724159A0A0B4J2E5 919 aa8.44□□□□□ -1.06
RFC1-217ENST00000639695 E2F8A0AVK6 867 aa8.44□□□□□ -1.06
RFC1-217ENST00000639695 CRTAMO95727 393 aa8.44□□□□□ -1.06
RFC1-217ENST00000639695 PDE6BP35913 854 aa8.44□□□□□ -1.06
RFC1-217ENST00000639695 POU4F1Q01851 419 aa8.44□□□□□ -1.06
RFC1-217ENST00000639695 GUCY1A3Q02108 690 aa8.44□□□□□ -1.06
RFC1-217ENST00000639695 MTMR1Q13613 665 aa8.44□□□□□ -1.06
RFC1-217ENST00000639695 PWP2Q15269 919 aaKnown RBP8.44□□□□□ -1.06
RFC1-217ENST00000639695 NTRK3Q16288 839 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms