RNA–Protein interactions for RNA: ENST00000638506.1

KCNMA1-236, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-236ENST00000638506 MAP3K9P80192 1104 aa15.21■□□□□ 0.03
KCNMA1-236ENST00000638506 NBPF9Q3BBW0 867 aa15.21■□□□□ 0.03
KCNMA1-236ENST00000638506 TATDN1Q6P1N9 297 aa15.21■□□□□ 0.03
KCNMA1-236ENST00000638506 FAM114A1Q8IWE2 563 aa15.21■□□□□ 0.03
KCNMA1-236ENST00000638506 KIAA0895Q8NCT3 520 aa15.21■□□□□ 0.03
KCNMA1-236ENST00000638506 RAD54LQ92698 747 aa15.21■□□□□ 0.03
KCNMA1-236ENST00000638506 NUDT12Q9BQG2 462 aa15.21■□□□□ 0.03
KCNMA1-236ENST00000638506 TUBGCP2Q9BSJ2 902 aa15.21■□□□□ 0.03
KCNMA1-236ENST00000638506 CARD6Q9BX69 1037 aa15.21■□□□□ 0.03
KCNMA1-236ENST00000638506 GJA3Q9Y6H8 435 aa15.21■□□□□ 0.03
KCNMA1-236ENST00000638506 ZNF541Q9H0D2 1346 aa15.21■□□□□ 0.03
KCNMA1-236ENST00000638506 DNM2P50570 870 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 SEPT2Q15019 361 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 TMEM119Q4V9L6 283 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 RBM26Q5T8P6 1007 aaKnown RBP15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 CIAPIN1Q6FI81 312 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 FBXO38Q6PIJ6 1188 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 ARHGAP27Q6ZUM4 889 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 UNC13DQ70J99 1090 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 HAS1Q92839 578 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 HPS3Q969F9 1004 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 SLC39A2Q9NP94 309 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 OGFRQ9NZT2 677 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 PCDHA1Q9Y5I3 950 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 ASTN2O75129 1339 aaPredicted RBP15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 A0A0U1RQJ8 604 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 TTC26A0AVF1 554 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 B4DLN1 442 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 MARCH6O60337 910 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 GABPB1Q06547 395 aaPredicted RBP15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 TMEM179Q6ZVK1 233 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 SIAH1Q8IUQ4 282 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 ATRIPQ8WXE1 791 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 NAP1L4Q99733 375 aaKnown RBP15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 IRX2Q9BZI1 471 aaPredicted RBP15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 LRRC27Q9C0I9 530 aa15.2■□□□□ 0.02
KCNMA1-236ENST00000638506 SPDYE4A6NLX3 237 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 USP17L15C9J2P7 530 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 USP17L13C9JLJ4 530 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 USP17L11C9JVI0 530 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 USP17L18D6R9N7 530 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 USP17L22D6RA61 530 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 USP17L17D6RBQ6 530 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 USP17L19D6RCP7 530 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 USP17L20D6RJB6 530 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 KIF5CO60282 957 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 TADA3O75528 432 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 ICA1Q05084 483 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 USP17L24Q0WX57 530 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 DLGAP5Q15398 846 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 CDC37Q16543 378 aaPredicted RBP15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 USP17L6PQ6QN14 398 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 DYMQ7RTS9 669 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 ACRBPQ8NEB7 543 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 OR8K1Q8NGG5 319 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 UBXN4Q92575 508 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 CNOT6LQ96LI5 555 aaKnown RBP15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 SYT17Q9BSW7 474 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 SEMA6BQ9H3T3 888 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 LUC7L2Q9Y383 392 aaKnown RBP15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 MRFAP1Q9Y605 127 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 YBX3P16989 372 aaKnown RBP eCLIP15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 MTIF2P46199 727 aaKnown RBP15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 ABCB5Q2M3G0 1257 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 CENPPQ6IPU0 288 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 KCNK18Q7Z418 384 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 OGFOD1Q8N543 542 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 EEF2KMTQ96G04 330 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 VEZTQ9HBM0 779 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 ZNF70Q9UC06 446 aaPredicted RBP15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 CAPN11Q9UMQ6 739 aa15.19■□□□□ 0.02
KCNMA1-236ENST00000638506 EFCAB8A8MWE9 144 aa15.18■□□□□ 0.02
KCNMA1-236ENST00000638506 GDF11O95390 407 aa15.18■□□□□ 0.02
KCNMA1-236ENST00000638506 GMPSP49915 693 aaPredicted RBP15.18■□□□□ 0.02
KCNMA1-236ENST00000638506 ARHGAP29Q52LW3 1261 aa15.18■□□□□ 0.02
KCNMA1-236ENST00000638506 SAMD7Q7Z3H4 446 aa15.18■□□□□ 0.02
KCNMA1-236ENST00000638506 GJA10Q969M2 543 aa15.18■□□□□ 0.02
KCNMA1-236ENST00000638506 DNAJC7Q99615 494 aa15.18■□□□□ 0.02
KCNMA1-236ENST00000638506 VPS33BQ9H267 617 aa15.18■□□□□ 0.02
KCNMA1-236ENST00000638506 PCDHA12Q9UN75 941 aa15.18■□□□□ 0.02
KCNMA1-236ENST00000638506 F5H6K3 240 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 H2AFXP16104 143 aaPredicted RBP15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 JAG1P78504 1218 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 KLRC3Q07444 240 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 TBC1D8BQ0IIM8 1120 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 RRP1BQ14684 758 aaKnown RBP15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 ECM1Q16610 540 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 DDX12PQ92771 950 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 CHP1Q99653 195 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 ANO3Q9BYT9 981 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 DDX41Q9UJV9 622 aaKnown RBP15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 SBF1O95248 1867 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 MYH7BA7E2Y1 1941 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 CNTNAP1P78357 1384 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 WNT10BO00744 389 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 ENTPD3O75355 529 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 IDEP14735 1019 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 HOXA7P31268 230 aaPredicted RBP15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 USP11P51784 963 aa15.17■□□□□ 0.02
KCNMA1-236ENST00000638506 PPP2R3AQ06190 1150 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms