RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 CHP1Q99653 195 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 SERTAD1Q9UHV2 236 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 PCDHGC5Q9Y5F6 944 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 ZNF804BA4D1E1 1349 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 PAK2Q13177 524 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 SNX1Q13596 522 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 TRIM29Q14134 588 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 PDIA5Q14554 519 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 THEMIS2Q5TEJ8 643 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 IFT20Q8IY31 132 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 ZNF579Q8NAF0 562 aaKnown RBP13.38□□□□□ -0.27
GFAP-228ENST00000638488 ZFAND2BQ8WV99 257 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 ZNF570Q96NI8 536 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 ALS2CR12Q96Q35 445 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 UBAC1Q9BSL1 405 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 JADE2Q9NQC1 790 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 FAM217BQ9NTX9 383 aaPredicted RBP13.38□□□□□ -0.27
GFAP-228ENST00000638488 RNF225M0QZC1 329 aaPredicted RBP13.38□□□□□ -0.27
GFAP-228ENST00000638488 N4BP3O15049 544 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 PAPOLAP51003 745 aaKnown RBP13.38□□□□□ -0.27
GFAP-228ENST00000638488 SSRP1Q08945 709 aaKnown RBP13.38□□□□□ -0.27
GFAP-228ENST00000638488 HIBCHQ6NVY1 386 aaPredicted RBP13.38□□□□□ -0.27
GFAP-228ENST00000638488 FAM196AQ6ZSG2 479 aa13.38□□□□□ -0.27
GFAP-228ENST00000638488 PPANQ9NQ55 473 aaKnown RBP13.38□□□□□ -0.27
GFAP-228ENST00000638488 AATFQ9NY61 560 aaKnown RBP eCLIP13.38□□□□□ -0.27
GFAP-228ENST00000638488 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
GFAP-228ENST00000638488 ACTN4O43707 911 aaKnown RBP13.37□□□□□ -0.27
GFAP-228ENST00000638488 ALADP13716 330 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 GUCY1A2P33402 732 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 EVX2Q03828 476 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 BYSLQ13895 437 aaKnown RBP13.37□□□□□ -0.27
GFAP-228ENST00000638488 KRT31Q15323 416 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 GKAP1Q5VSY0 366 aaPredicted RBP13.37□□□□□ -0.27
GFAP-228ENST00000638488 LRIG3Q6UXM1 1119 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 TXNRD3Q86VQ6 643 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 SGMS1Q86VZ5 419 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 PIK3R5Q8WYR1 880 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 TSGA10Q9BZW7 698 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 YIPF3Q9GZM5 350 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 SLC5A4Q9NY91 659 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 SLC12A6Q9UHW9 1150 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 BTAF1O14981 1849 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 PTPREP23469 700 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 PRDX5P30044 214 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 HIBADHP31937 336 aaKnown RBP13.37□□□□□ -0.27
GFAP-228ENST00000638488 LIFRP42702 1097 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 NTRK3Q16288 839 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 SLC10A5Q5PT55 438 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 RC3H1Q5TC82 1133 aaKnown RBP13.37□□□□□ -0.27
GFAP-228ENST00000638488 ZNF384Q8TF68 577 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 GDF3Q9NR23 364 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 CHCHD3Q9NX63 227 aaKnown RBP13.37□□□□□ -0.27
GFAP-228ENST00000638488 ECM29Q5VYK3 1845 aa13.37□□□□□ -0.27
GFAP-228ENST00000638488 GOLGA6L10A6NI86 522 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 LINGO3P0C6S8 592 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 TCP1P17987 556 aaKnown RBP13.36□□□□□ -0.27
GFAP-228ENST00000638488 CYLC1P35663 651 aaPredicted RBP13.36□□□□□ -0.27
GFAP-228ENST00000638488 COPB1P53618 953 aaKnown RBP13.36□□□□□ -0.27
GFAP-228ENST00000638488 PPP1R7Q15435 360 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 RTN1Q16799 776 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 TRAPPC3LQ5T215 181 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 C8orf74Q6P047 294 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 WHAMMQ8TF30 809 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
GFAP-228ENST00000638488 RIOK1Q9BRS2 568 aaKnown RBP13.36□□□□□ -0.27
GFAP-228ENST00000638488 NDST4Q9H3R1 872 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 RNF41Q9H4P4 317 aaPredicted RBP13.36□□□□□ -0.27
GFAP-228ENST00000638488 TMBIM4Q9HC24 238 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 RGL1Q9NZL6 768 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 ANKIB1Q9P2G1 1089 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 KCNJ14Q9UNX9 436 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 CICQ96RK0 1608 aaPredicted RBP13.36□□□□□ -0.27
GFAP-228ENST00000638488 EP400Q96L91 3159 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 TNKSO95271 1327 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 CHD4Q14839 1912 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 ABLIM1O14639 778 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 MECOMQ03112 1051 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 TSR1Q2NL82 804 aaKnown RBP13.36□□□□□ -0.27
GFAP-228ENST00000638488 TEX9Q8N6V9 391 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 CCDC63Q8NA47 563 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 PAPOLBQ9NRJ5 636 aaKnown RBP13.36□□□□□ -0.27
GFAP-228ENST00000638488 ZFATQ9P243 1243 aa13.36□□□□□ -0.27
GFAP-228ENST00000638488 PPFIA2O75334 1257 aa13.35□□□□□ -0.27
GFAP-228ENST00000638488 CD44P16070 742 aaKnown RBP13.35□□□□□ -0.27
GFAP-228ENST00000638488 CDC25AP30304 524 aa13.35□□□□□ -0.27
GFAP-228ENST00000638488 CCT6AP40227 531 aaKnown RBP13.35□□□□□ -0.27
GFAP-228ENST00000638488 LAMB3Q13751 1172 aa13.35□□□□□ -0.27
GFAP-228ENST00000638488 ZNF268Q14587 947 aaPredicted RBP13.35□□□□□ -0.27
GFAP-228ENST00000638488 MEA1Q16626 185 aa13.35□□□□□ -0.27
GFAP-228ENST00000638488 QPCTQ16769 361 aa13.35□□□□□ -0.27
GFAP-228ENST00000638488 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.35□□□□□ -0.27
GFAP-228ENST00000638488 GJD4Q96KN9 370 aaPredicted RBP13.35□□□□□ -0.27
GFAP-228ENST00000638488 FBXO2Q9UK22 296 aaPredicted RBP13.35□□□□□ -0.27
GFAP-228ENST00000638488 SLC12A4Q9UP95 1085 aa13.35□□□□□ -0.27
GFAP-228ENST00000638488 CASZ1Q86V15 1759 aa13.35□□□□□ -0.27
GFAP-228ENST00000638488 hCG_1642624A0A1W2PR95 340 aa13.35□□□□□ -0.27
GFAP-228ENST00000638488 SLC7A5Q01650 507 aa13.35□□□□□ -0.27
GFAP-228ENST00000638488 BIRC3Q13489 604 aa13.35□□□□□ -0.27
GFAP-228ENST00000638488 CDC37Q16543 378 aaPredicted RBP13.35□□□□□ -0.27
GFAP-228ENST00000638488 MTHFD1LQ6UB35 978 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms