RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 RNPC3Q96LT9 517 aaKnown RBP9.12□□□□□ -0.95
PNKP-229ENST00000637897 AMNQ9BXJ7 453 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 LRRC2Q9BYS8 371 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 SPC25Q9HBM1 224 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 MRPL11Q9Y3B7 192 aaKnown RBP9.12□□□□□ -0.95
PNKP-229ENST00000637897 GBF1Q92538 1859 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 MYH7BA7E2Y1 1941 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 PTPRSQ13332 1948 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 FRMPD4Q14CM0 1322 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 MROH7Q68CQ1 1323 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 HAS3O00219 553 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 MEIS2O14770 477 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 ARHGEF15O94989 841 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 MYL3P08590 195 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 HOXD8P13378 290 aaPredicted RBP9.11□□□□□ -0.95
PNKP-229ENST00000637897 FUT2Q10981 343 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 GRIN2CQ14957 1233 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 WTAPQ15007 396 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 PGM5Q15124 567 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 PPP2R5BQ15173 497 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 BMP2KLQ5H9B9 411 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 TMEM67Q5HYA8 995 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 TRAF7Q6Q0C0 670 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 HOMER1Q86YM7 354 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 ZNF654Q8IZM8 581 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 NSUN6Q8TEA1 469 aaKnown RBP9.11□□□□□ -0.95
PNKP-229ENST00000637897 RUFY2Q8WXA3 655 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 HERVK_113Q902F9 699 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 PBX4Q9BYU1 374 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 OSBPL7Q9BZF2 842 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 MAF1Q9H063 256 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 HIPK3Q9H422 1215 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 PNMA2Q9UL42 364 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 YBX2Q9Y2T7 364 aaKnown RBP9.11□□□□□ -0.95
PNKP-229ENST00000637897 PCDHA1Q9Y5I3 950 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 DOCK5Q9H7D0 1870 aa9.11□□□□□ -0.95
PNKP-229ENST00000637897 PNMA6FA0A0J9YX94 578 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 hCG_1642624A0A1W2PR95 340 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 ADAMTS3O15072 1205 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 NKRFO15226 690 aaKnown RBP eCLIP9.1□□□□□ -0.95
PNKP-229ENST00000637897 PRC1O43663 620 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 SORBS3O60504 671 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 MYOGP15173 224 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 ZNF200P98182 395 aaPredicted RBP9.1□□□□□ -0.95
PNKP-229ENST00000637897 EXOSC10Q01780 885 aaKnown RBP9.1□□□□□ -0.95
PNKP-229ENST00000637897 TTLL4Q14679 1199 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 TRIM71Q2Q1W2 868 aaKnown RBP9.1□□□□□ -0.95
PNKP-229ENST00000637897 HSDL1Q3SXM5 330 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 GDF6Q6KF10 455 aaPredicted RBP9.1□□□□□ -0.95
PNKP-229ENST00000637897 TYW1BQ6NUM6 668 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 USP38Q8NB14 1042 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 PIBF1Q8WXW3 757 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 MYLIPQ8WY64 445 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 EMID1Q96A84 441 aaPredicted RBP9.1□□□□□ -0.95
PNKP-229ENST00000637897 TCEANC2Q96MN5 208 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 IWS1Q96ST2 819 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 MTG1Q9BT17 334 aaPredicted RBP9.1□□□□□ -0.95
PNKP-229ENST00000637897 UPF2Q9HAU5 1272 aaKnown RBP9.1□□□□□ -0.95
PNKP-229ENST00000637897 IL23AQ9NPF7 189 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 FAM217BQ9NTX9 383 aaPredicted RBP9.1□□□□□ -0.95
PNKP-229ENST00000637897 BRPF3Q9ULD4 1205 aa9.1□□□□□ -0.95
PNKP-229ENST00000637897 REV3LO60673 3130 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 DHX16O60231 1041 aaKnown RBP9.09□□□□□ -0.95
PNKP-229ENST00000637897 EIF5BO60841 1220 aaKnown RBP9.09□□□□□ -0.95
PNKP-229ENST00000637897 EIF3JO75822 258 aaKnown RBP9.09□□□□□ -0.95
PNKP-229ENST00000637897 UBA1P22314 1058 aaKnown RBP9.09□□□□□ -0.95
PNKP-229ENST00000637897 DNAJB2P25686 324 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 CPT1AP50416 773 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 TRDNQ13061 729 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 PPIGQ13427 754 aaKnown RBP eCLIP9.09□□□□□ -0.954e-7■■□□□ 12.5
PNKP-229ENST00000637897 ADGRE1Q14246 886 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 STXBP2Q15833 593 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 ARHGEF16Q5VV41 709 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 MYSM1Q5VVJ2 828 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 NFRKBQ6P4R8 1299 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 USP17L6PQ6QN14 398 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 OTOP2Q7RTS6 562 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 SPRED2Q7Z698 418 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 SESTD1Q86VW0 696 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 MCF2L2Q86YR7 1114 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 KCNB2Q92953 911 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 MAP3K14Q99558 947 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 C16orf70Q9BSU1 422 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 SPZ1Q9BXG8 430 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 POLR3EQ9NVU0 708 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 MUC3AQ02505 3323 aa9.09□□□□□ -0.95
PNKP-229ENST00000637897 TANC1Q9C0D5 1861 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.08□□□□□ -0.96
PNKP-229ENST00000637897 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.08□□□□□ -0.96
PNKP-229ENST00000637897 TLR3O15455 904 aaKnown RBP9.08□□□□□ -0.96
PNKP-229ENST00000637897 ZEB2O60315 1214 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 DDAH1O94760 285 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 F2P00734 622 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 GH1P01241 217 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 IQCF3P0C7M6 154 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 ZNF286BP0CG31 522 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 MYCLP12524 364 aaPredicted RBP9.08□□□□□ -0.96
PNKP-229ENST00000637897 CPA1P15085 419 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 HOXC8P31273 242 aa9.08□□□□□ -0.96
PNKP-229ENST00000637897 LIFRP42702 1097 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms