RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 SLC30A10Q6XR72 485 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 USP49Q70CQ1 688 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 NIPA1Q7RTP0 329 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 NCAPG2Q86XI2 1143 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 ELOA2Q8IYF1 753 aaPredicted RBP13.3□□□□□ -0.28
CLN6-223ENST00000637823 IGSF22Q8N9C0 903 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 SHCBP1Q8NEM2 672 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 LENG9Q96B70 501 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 HHIPL1Q96JK4 782 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 RMDN3Q96TC7 470 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 SDF4Q9BRK5 362 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 CCSER1Q9C0I3 900 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 MROH8Q9H579 483 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 TTC12Q9H892 705 aaPredicted RBP13.3□□□□□ -0.28
CLN6-223ENST00000637823 TXNRD2Q9NNW7 524 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 ZCCHC17Q9NP64 241 aaKnown RBP13.3□□□□□ -0.28
CLN6-223ENST00000637823 A1CFQ9NQ94 594 aaKnown RBP13.3□□□□□ -0.28
CLN6-223ENST00000637823 PXMP2Q9NR77 195 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 USP25Q9UHP3 1055 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 PCDHA12Q9UN75 941 aa13.3□□□□□ -0.28
CLN6-223ENST00000637823 IGLV3-22A0A075B6J6 115 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 SYCE3A1L190 88 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 MEIS1O00470 390 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 POLR2DO15514 142 aaKnown RBP13.29□□□□□ -0.28
CLN6-223ENST00000637823 SLC10A3P09131 477 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 CYP2C8P10632 490 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 UBA7P41226 1012 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 ERVK-9P63128 1117 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 ERVK-24P63145 666 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 UBXN2AP68543 259 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 CCNA1P78396 465 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 GSE1Q14687 1217 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 PGM5Q15124 567 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 Q3C1V9 767 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 ARHGEF16Q5VV41 709 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 RBM43Q6ZSC3 357 aaKnown RBP13.29□□□□□ -0.28
CLN6-223ENST00000637823 PLA2G4DQ86XP0 818 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 ANKRD35Q8N283 1001 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 FAM43AQ8N2R8 423 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 GPRC5AQ8NFJ5 357 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 ETNPPLQ8TBG4 499 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 NSUN6Q8TEA1 469 aaKnown RBP13.29□□□□□ -0.28
CLN6-223ENST00000637823 SMCR8Q8TEV9 937 aaPredicted RBP13.29□□□□□ -0.28
CLN6-223ENST00000637823 PTPN18Q99952 460 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 MXRA8Q9BRK3 442 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 LRWD1Q9UFC0 647 aa13.29□□□□□ -0.28
CLN6-223ENST00000637823 MSH4O15457 936 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 SLC26A4O43511 780 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 PEX10O60683 326 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 BCRP11274 1271 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 ERCC3P19447 782 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 SETQ01105 290 aaPredicted RBP13.28□□□□□ -0.28
CLN6-223ENST00000637823 LONRF3Q496Y0 759 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 LRSAM1Q6UWE0 723 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 KRBA2Q6ZNG9 492 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 IQUBQ8NA54 791 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 DNERQ8NFT8 737 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 IWS1Q96ST2 819 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 PARK7Q99497 189 aaKnown RBP13.28□□□□□ -0.28
CLN6-223ENST00000637823 PDCD2LQ9BRP1 358 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 PANK2Q9BZ23 570 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 MORF4L1Q9UBU8 362 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 CCDC39Q9UFE4 941 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 HOOK1Q9UJC3 728 aaKnown RBP13.28□□□□□ -0.28
CLN6-223ENST00000637823 ABT1Q9ULW3 272 aaKnown RBP13.28□□□□□ -0.28
CLN6-223ENST00000637823 UBIAD1Q9Y5Z9 338 aa13.28□□□□□ -0.28
CLN6-223ENST00000637823 PLXNA1Q9UIW2 1896 aa13.27□□□□□ -0.28
CLN6-223ENST00000637823 FAM155AB1AL88 458 aaPredicted RBP13.27□□□□□ -0.29
CLN6-223ENST00000637823 STAM2O75886 525 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 NR3C2P08235 984 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 SLFN14P0C7P3 912 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 EIF2AK2P19525 551 aaKnown RBP13.27□□□□□ -0.29
CLN6-223ENST00000637823 CCND2P30279 289 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 MRPS9P82933 396 aaKnown RBP13.27□□□□□ -0.29
CLN6-223ENST00000637823 CABP7Q86V35 215 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 VSIG10LQ86VR7 867 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 PDILTQ8N807 584 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 CNNM3Q8NE01 707 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 IL31RAQ8NI17 732 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 CYP2W1Q8TAV3 490 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 SLC5A5Q92911 643 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 CCDC34Q96HJ3 373 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 JADE2Q9NQC1 790 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 SERTAD1Q9UHV2 236 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 PLXNB2O15031 1838 aa13.27□□□□□ -0.29
CLN6-223ENST00000637823 A0A087X0B3 334 aa13.26□□□□□ -0.29
CLN6-223ENST00000637823 B4DLN1 442 aa13.26□□□□□ -0.29
CLN6-223ENST00000637823 POTEB2H3BUK9 544 aa13.26□□□□□ -0.29
CLN6-223ENST00000637823 MAFGO15525 162 aa13.26□□□□□ -0.29
CLN6-223ENST00000637823 ACTN4O43707 911 aaKnown RBP13.26□□□□□ -0.29
CLN6-223ENST00000637823 MYCLP12524 364 aaPredicted RBP13.26□□□□□ -0.29
CLN6-223ENST00000637823 CDC25AP30304 524 aa13.26□□□□□ -0.29
CLN6-223ENST00000637823 MDM2Q00987 491 aaPredicted RBP13.26□□□□□ -0.29
CLN6-223ENST00000637823 SREBF2Q12772 1141 aa13.26□□□□□ -0.29
CLN6-223ENST00000637823 WDR81Q562E7 1941 aa13.26□□□□□ -0.29
CLN6-223ENST00000637823 CKAP2LQ8IYA6 745 aa13.26□□□□□ -0.29
CLN6-223ENST00000637823 CEP57L1Q8IYX8 460 aa13.26□□□□□ -0.29
CLN6-223ENST00000637823 DHX58Q96C10 678 aa13.26□□□□□ -0.29
CLN6-223ENST00000637823 CALML4Q96GE6 196 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms