RNA–Protein interactions for RNA: ENST00000637535.1

CACNB4-256, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,731 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-256	ENST00000637535	XRCC5	P13010	732 aa	Known RBP	7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	PECAM1	P16284	738 aa	Predicted RBP	7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	MAPK4	P31152	587 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	ABCD1	P33897	745 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	RGS2	P41220	211 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	GSDMD	P57764	484 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	CCDC144B	Q3MJ40	725 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	GIMAP6	Q6P9H5	292 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	CCDC144CP	Q8IYA2	1237 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	LRRN4CL	Q8ND94	238 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	FAM71B	Q8TC56	605 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	MICAL1	Q8TDZ2	1067 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	SOCS4	Q8WXH5	440 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	FERMT2	Q96AC1	680 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	APBA2	Q99767	749 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	DHX36	Q9H2U1	1008 aa	Known RBP	7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	ACBD3	Q9H3P7	528 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	PRDM5	Q9NQX1	630 aa	Predicted RBP	7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	VPS18	Q9P253	973 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	ODF2L	Q9ULJ1	636 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	ATP11B	Q9Y2G3	1177 aa		7.87	□□□□□ -1.15
CACNB4-256	ENST00000637535	C19orf81	C9J6K1	198 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	IDH1	O75874	414 aa	Known RBP	7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	GNAI3	P08754	354 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	TRIM27	P14373	513 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	CYP7A1	P22680	504 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	PLCD1	P51178	756 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	TYRO3	Q06418	890 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	MAP2K5	Q13163	448 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	MTX1	Q13505	466 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	SHH	Q15465	462 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	TNNI3K	Q59H18	835 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	CDCA2	Q69YH5	1023 aa	Predicted RBP	7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	RBM43	Q6ZSC3	357 aa	Known RBP	7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	SH3RF1	Q7Z6J0	888 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	CLEC10A	Q8IUN9	316 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	FOXP4	Q8IVH2	680 aa	Predicted RBP	7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	RBM12B	Q8IXT5	1001 aa	Known RBP	7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	RPUSD2	Q8IZ73	545 aa	Known RBP	7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	RABGGTA	Q92696	567 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	THOC1	Q96FV9	657 aa	Known RBP	7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	CCDC34	Q96HJ3	373 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	ATP6V1D	Q9Y5K8	247 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	FPGT-TNNI3K	V9GXZ4	949 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	COL2A1	P02458	1487 aa	Predicted RBP	7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	FSBP	O95073	299 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	GNAI2	P04899	355 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	UQCRFS1P1	P0C7P4	283 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	VCAM1	P19320	739 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	USP5	P45974	858 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	RTP1	P59025	263 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	PPP4C	P60510	307 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	ATP2B2	Q01814	1243 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	LONRF2	Q1L5Z9	754 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	USP17L2	Q6R6M4	530 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	CATSPERG	Q6ZRH7	1159 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	RSRC2	Q7L4I2	434 aa	Known RBP	7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	KIAA1328	Q86T90	577 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	IQCA1	Q86XH1	822 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	NCAPG2	Q86XI2	1143 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	MAGEB6	Q8N7X4	407 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	MAB21L3	Q8N8X9	362 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	MAGEC3	Q8TD91	643 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	MYLIP	Q8WY64	445 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	LBHD1	Q9BQE6	289 aa	Predicted RBP	7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	CBX8	Q9HC52	389 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	BATF3	Q9NR55	127 aa		7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	DDX20	Q9UHI6	824 aa	Known RBP	7.86	□□□□□ -1.15
CACNB4-256	ENST00000637535	RLF	Q13129	1914 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	MAST2	Q6P0Q8	1798 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	CCDC69	A6NI79	296 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	SPDYE16	A6NNV3	312 aa	Predicted RBP	7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	USP17L15	C9J2P7	530 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	USP17L13	C9JLJ4	530 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	USP17L11	C9JVI0	530 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	USP17L18	D6R9N7	530 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	USP17L22	D6RA61	530 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	USP17L17	D6RBQ6	530 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	USP17L19	D6RCP7	530 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	USP17L20	D6RJB6	530 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	SMIM22	K7EJ46	135 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	EPB41L2	O43491	1005 aa	Known RBP	7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	SHOX2	O60902	331 aa	Predicted RBP	7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	SURF6	O75683	361 aa	Known RBP	7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	HLA-DOA	P06340	250 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	PTPRE	P23469	700 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	EVC	P57679	992 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	ETF1	P62495	437 aa	Known RBP	7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	USP17L24	Q0WX57	530 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	SEPT2	Q15019	361 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	FILIP1L	Q4L180	1135 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	KIAA1755	Q5JYT7	1200 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	MFSD14C	Q5VZR4	134 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	FBXW10	Q5XX13	1052 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	ATF7IP	Q6VMQ6	1270 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	HDX	Q7Z353	690 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	METTL16	Q86W50	562 aa	Known RBP	7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	ZNF687	Q8N1G0	1237 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	TMEM57	Q8N5G2	664 aa		7.85	□□□□□ -1.15
CACNB4-256	ENST00000637535	CEP112	Q8N8E3	955 aa		7.85	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms