RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 XRRA1Q6P2D8 792 aa17.33■□□□□ 0.36
CLN6-219ENST00000637329 RNF207Q6ZRF8 634 aa17.33■□□□□ 0.36
CLN6-219ENST00000637329 NIPA1Q7RTP0 329 aa17.33■□□□□ 0.36
CLN6-219ENST00000637329 ETNPPLQ8TBG4 499 aa17.33■□□□□ 0.36
CLN6-219ENST00000637329 SYTL5Q8TDW5 730 aaPredicted RBP17.33■□□□□ 0.36
CLN6-219ENST00000637329 TBC1D5Q92609 795 aa17.33■□□□□ 0.36
CLN6-219ENST00000637329 LENG9Q96B70 501 aa17.33■□□□□ 0.36
CLN6-219ENST00000637329 EPSTI1Q96J88 318 aa17.33■□□□□ 0.36
CLN6-219ENST00000637329 FAM20AQ96MK3 541 aa17.33■□□□□ 0.36
CLN6-219ENST00000637329 CUEDC2Q9H467 287 aa17.33■□□□□ 0.36
CLN6-219ENST00000637329 MAGEF1Q9HAY2 307 aa17.33■□□□□ 0.36
CLN6-219ENST00000637329 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.33■□□□□ 0.36
CLN6-219ENST00000637329 PDE4DIPQ5VU43 2346 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 PFASO15067 1338 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 IGLV3-22A0A075B6J6 115 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 ACTN4O43707 911 aaKnown RBP17.32■□□□□ 0.36
CLN6-219ENST00000637329 CAVIN2O95810 425 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 SLFN14P0C7P3 912 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 UBA7P41226 1012 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 RPS6P62753 249 aaKnown RBP17.32■□□□□ 0.36
CLN6-219ENST00000637329 E2F4Q16254 413 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 PCNX4Q63HM2 1172 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 SASS6Q6UVJ0 657 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 SLC30A10Q6XR72 485 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 USP49Q70CQ1 688 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 CEP57L1Q8IYX8 460 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 IQUBQ8NA54 791 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 HAS1Q92839 578 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 DISC1Q9NRI5 854 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 CCDC39Q9UFE4 941 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 STK24Q9Y6E0 443 aa17.32■□□□□ 0.36
CLN6-219ENST00000637329 SMCHD1A6NHR9 2005 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 FAM86B1E9PN63 330 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 MARCH6O60337 910 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 SLC25A27O95847 323 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 FAM86B2P0C5J1 330 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 BCRP11274 1271 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 ZNF76P36508 570 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 TXKP42681 527 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 MRE11P49959 708 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 TYRO3Q06418 890 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 LONRF3Q496Y0 759 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 CEP55Q53EZ4 464 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 PRR16Q569H4 304 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 PRPF38BQ5VTL8 546 aaKnown RBP17.31■□□□□ 0.36
CLN6-219ENST00000637329 SPRYD7Q5W111 196 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 NSMFQ6X4W1 530 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 ANKRD23Q86SG2 305 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 GAS2L3Q86XJ1 694 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 CKAP2LQ8IYA6 745 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 MS4A4AQ96JQ5 239 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 SPATC1LQ9H0A9 340 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 TTC12Q9H892 705 aaPredicted RBP17.31■□□□□ 0.36
CLN6-219ENST00000637329 COL20A1Q9P218 1284 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 KIAA1468Q9P260 1216 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 TSKSQ9UJT2 592 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 RIPK3Q9Y572 518 aa17.31■□□□□ 0.36
CLN6-219ENST00000637329 KDM3AQ9Y4C1 1321 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 A0A087X0B3 334 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 PLS1Q14651 629 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 POSTNQ15063 836 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 STX1AQ16623 288 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 CST9Q5W186 159 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 CABP7Q86V35 215 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 DHX58Q96C10 678 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 CYP39A1Q9NYL5 469 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 BTBD7Q9P203 1132 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 LRWD1Q9UFC0 647 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 TUBE1Q9UJT0 475 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 PCDHA12Q9UN75 941 aa17.3■□□□□ 0.36
CLN6-219ENST00000637329 CCL15-CCL14A0A0B4J2E2 113 aa17.29■□□□□ 0.36
CLN6-219ENST00000637329 CNMDO75829 334 aa17.29■□□□□ 0.36
CLN6-219ENST00000637329 MYL1P05976 194 aa17.29■□□□□ 0.36
CLN6-219ENST00000637329 TECP42680 631 aa17.29■□□□□ 0.36
CLN6-219ENST00000637329 HUNKP57058 714 aa17.29■□□□□ 0.36
CLN6-219ENST00000637329 ZRSR1Q15695 479 aaKnown RBP17.29■□□□□ 0.36
CLN6-219ENST00000637329 CCL15Q16663 113 aa17.29■□□□□ 0.36
CLN6-219ENST00000637329 PDILTQ8N807 584 aa17.29■□□□□ 0.36
CLN6-219ENST00000637329 RASSF8Q8NHQ8 419 aa17.29■□□□□ 0.36
CLN6-219ENST00000637329 CALML4Q96GE6 196 aa17.29■□□□□ 0.36
CLN6-219ENST00000637329 A1CFQ9NQ94 594 aaKnown RBP17.29■□□□□ 0.36
CLN6-219ENST00000637329 PXMP2Q9NR77 195 aa17.29■□□□□ 0.36
CLN6-219ENST00000637329 SERTAD1Q9UHV2 236 aa17.29■□□□□ 0.36
CLN6-219ENST00000637329 MEIS1O00470 390 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 MSH4O15457 936 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 STAM2O75886 525 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 STAT6P42226 847 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 MDM2Q00987 491 aaPredicted RBP17.28■□□□□ 0.36
CLN6-219ENST00000637329 BAATQ14032 418 aaPredicted RBP17.28■□□□□ 0.36
CLN6-219ENST00000637329 PGM5Q15124 567 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 KRT79Q5XKE5 535 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 HAUS3Q68CZ6 603 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 PDXDC2PQ6P474 469 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 POTEEQ6S8J3 1075 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 SH3RF1Q7Z6J0 888 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 PLA2G4DQ86XP0 818 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 SHCBP1Q8NEM2 672 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 DNERQ8NFT8 737 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 RMDN3Q96TC7 470 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms