RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CWC22Q9HCG8 908 aaKnown RBP7.74□□□□□ -1.17
UPF3B-205ENST00000636792 GPCPD1Q9NPB8 672 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 BARHL2Q9NY43 387 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 MRPL11Q9Y3B7 192 aaKnown RBP7.74□□□□□ -1.17
UPF3B-205ENST00000636792 PFASO15067 1338 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 ZNFX1Q9P2E3 1918 aaKnown RBP7.74□□□□□ -1.17
UPF3B-205ENST00000636792 STRNO43815 780 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 GOLGA8HP0CJ92 632 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 BCRP11274 1271 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 GNA11P29992 359 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 CCT2P78371 535 aaKnown RBP7.73□□□□□ -1.17
UPF3B-205ENST00000636792 ST3GAL1Q11201 340 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 STK3Q13188 491 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 IRF5Q13568 498 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 TRIM29Q14134 588 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 ARHGEF6Q15052 776 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 QRICH1Q2TAL8 776 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 TTBK2Q6IQ55 1244 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 C17orf99Q6UX52 265 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 MCF2L2Q86YR7 1114 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 CCDC144CPQ8IYA2 1237 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 FAM184AQ8NB25 1140 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 DAGLBQ8NCG7 672 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 GPRC5AQ8NFJ5 357 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 SOCS4Q8WXH5 440 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 SPATC1LQ9H0A9 340 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 ZMYND12Q9H0C1 365 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 ACAD9Q9H845 621 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 NCOA5Q9HCD5 579 aaKnown RBP7.73□□□□□ -1.17
UPF3B-205ENST00000636792 BRMS1Q9HCU9 246 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 FBXO28Q9NVF7 368 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 ORC3Q9UBD5 711 aaPredicted RBP7.73□□□□□ -1.17
UPF3B-205ENST00000636792 SMC3Q9UQE7 1217 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 MTMR7Q9Y216 660 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 ZNF536O15090 1300 aa7.73□□□□□ -1.17
UPF3B-205ENST00000636792 LRRC37A2A6NM11 1700 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 LCTP09848 1927 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 PIK3CDO00329 1044 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 CTDNEP1O95476 244 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 SLC16A2P36021 539 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 STAT3P40763 770 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 PRMT2P55345 433 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 AP3B2Q13367 1082 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 DGKZQ13574 1117 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 TMEM132BQ14DG7 1078 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 PKN1Q16512 942 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 SNRNP48Q6IEG0 339 aaKnown RBP7.72□□□□□ -1.17
UPF3B-205ENST00000636792 NOL8Q76FK4 1167 aaKnown RBP7.72□□□□□ -1.17
UPF3B-205ENST00000636792 RASGRP2Q7LDG7 609 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 GPIHBP1Q8IV16 184 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 PIGSQ96S52 555 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 P2RX7Q99572 595 aaKnown RBP7.72□□□□□ -1.17
UPF3B-205ENST00000636792 NUDT12Q9BQG2 462 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 SLC26A6Q9BXS9 759 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 UBA5Q9GZZ9 404 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 EHMT1Q9H9B1 1298 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 SLC5A4Q9NY91 659 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 RBPJLQ9UBG7 517 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 CCPG1Q9ULG6 757 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 PCDHA1Q9Y5I3 950 aa7.72□□□□□ -1.17
UPF3B-205ENST00000636792 SMCHD1A6NHR9 2005 aa7.71□□□□□ -1.17
UPF3B-205ENST00000636792 B4DLN1 442 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 STXBP3O00186 592 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 HOXA2O43364 376 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 AOC2O75106 756 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 FOSP01100 380 aaPredicted RBP7.71□□□□□ -1.18
UPF3B-205ENST00000636792 CYP2C8P10632 490 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 MRPL12P52815 198 aaKnown RBP7.71□□□□□ -1.18
UPF3B-205ENST00000636792 NAPAP54920 295 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 GRM1Q13255 1194 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 CRHR2Q13324 411 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 KIF22Q14807 665 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 SAFBQ15424 915 aaKnown RBP eCLIP7.71□□□□□ -1.18
UPF3B-205ENST00000636792 SLC35G1Q2M3R5 365 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 WWC2Q6AWC2 1192 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 HOMER1Q86YM7 354 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 MSL3Q8N5Y2 521 aaKnown RBP7.71□□□□□ -1.18
UPF3B-205ENST00000636792 DNAJC5GQ8N7S2 189 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 NECAB1Q8N987 351 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 DNERQ8NFT8 737 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 CUL5Q93034 780 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 PHKBQ93100 1093 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 ERO1AQ96HE7 468 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 ZFP42Q96MM3 310 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 MPHOSPH6Q99547 160 aaKnown RBP7.71□□□□□ -1.18
UPF3B-205ENST00000636792 ALG1Q9BT22 464 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 MOV10L1Q9BXT6 1211 aaKnown RBP7.71□□□□□ -1.18
UPF3B-205ENST00000636792 C6orf50Q9HD87 102 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 BTBD7Q9P203 1132 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 DIS3Q9Y2L1 958 aaKnown RBP7.71□□□□□ -1.18
UPF3B-205ENST00000636792 RBM19Q9Y4C8 960 aaKnown RBP7.71□□□□□ -1.18
UPF3B-205ENST00000636792 IVNS1ABPQ9Y6Y0 642 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 FRMPD4Q14CM0 1322 aa7.71□□□□□ -1.18
UPF3B-205ENST00000636792 MYH7BA7E2Y1 1941 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 KIAA1217Q5T5P2 1943 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 CNMDO75829 334 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 MMP1P03956 469 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 FDPSP14324 419 aaKnown RBP7.7□□□□□ -1.18
UPF3B-205ENST00000636792 GJB2P29033 226 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 HSD17B4P51659 736 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms