RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 FAM86C2PA6NEL3 165 aa8.64□□□□□ -1.03
CIITA-214ENST00000636238 C19orf67A6NJJ6 358 aa8.64□□□□□ -1.03
CIITA-214ENST00000636238 M0R2C6 588 aa8.64□□□□□ -1.03
CIITA-214ENST00000636238 GPAA1O43292 621 aa8.64□□□□□ -1.03
CIITA-214ENST00000636238 ARHGEF15O94989 841 aa8.64□□□□□ -1.03
CIITA-214ENST00000636238 KCNA5P22460 613 aa8.64□□□□□ -1.03
CIITA-214ENST00000636238 SSTR3P32745 418 aaPredicted RBP8.64□□□□□ -1.03
CIITA-214ENST00000636238 PDE4DQ08499 809 aa8.64□□□□□ -1.03
CIITA-214ENST00000636238 PTGISQ16647 500 aa8.64□□□□□ -1.03
CIITA-214ENST00000636238 ZMYM1Q5SVZ6 1142 aa8.64□□□□□ -1.03
CIITA-214ENST00000636238 KRT40Q6A162 431 aa8.64□□□□□ -1.03
CIITA-214ENST00000636238 PTCRAQ6ISU1 281 aaPredicted RBP8.64□□□□□ -1.03
CIITA-214ENST00000636238 ZNF589Q86UQ0 364 aaPredicted RBP8.64□□□□□ -1.03
CIITA-214ENST00000636238 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.64□□□□□ -1.03
CIITA-214ENST00000636238 SP7Q8TDD2 431 aaPredicted RBP8.64□□□□□ -1.03
CIITA-214ENST00000636238 PABPC5Q96DU9 382 aaKnown RBP8.64□□□□□ -1.03
CIITA-214ENST00000636238 KATNAL1Q9BW62 490 aa8.64□□□□□ -1.03
CIITA-214ENST00000636238 EPB41L4AQ9HCS5 686 aaPredicted RBP8.64□□□□□ -1.03
CIITA-214ENST00000636238 ZNFX1Q9P2E3 1918 aaKnown RBP8.64□□□□□ -1.03
CIITA-214ENST00000636238 CCDC171Q6TFL3 1326 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 BAZ2AQ9UIF9 1905 aaKnown RBP8.63□□□□□ -1.03
CIITA-214ENST00000636238 CAND2O75155 1236 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 CASTP20810 708 aaKnown RBP8.63□□□□□ -1.03
CIITA-214ENST00000636238 MCCP23508 829 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 HTRA4P83105 476 aaPredicted RBP8.63□□□□□ -1.03
CIITA-214ENST00000636238 TFAP4Q01664 338 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 PTK7Q13308 1070 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 BAATQ14032 418 aaPredicted RBP8.63□□□□□ -1.03
CIITA-214ENST00000636238 MCMDC2Q4G0Z9 681 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 MUM1L1Q5H9M0 696 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 EEPD1Q7L9B9 569 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 BMP8AQ7Z5Y6 402 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 TICAM2Q86XR7 235 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 ADHFE1Q8IWW8 467 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 IFNL3Q8IZI9 196 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 FBXO22Q8NEZ5 403 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 GDPD5Q8WTR4 605 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 OSBP2Q969R2 916 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 EMID1Q96A84 441 aaPredicted RBP8.63□□□□□ -1.03
CIITA-214ENST00000636238 IRF2BPLQ9H1B7 796 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 HELLSQ9NRZ9 838 aa8.63□□□□□ -1.03
CIITA-214ENST00000636238 ISY1Q9ULR0 285 aaKnown RBP8.63□□□□□ -1.03
CIITA-214ENST00000636238 COL11A1P12107 1806 aaPredicted RBP8.63□□□□□ -1.03
CIITA-214ENST00000636238 COL4A6Q14031 1691 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 LCHNA4D1U4 455 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 ST18O60284 1047 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 PRDM1O75626 825 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 GH1P01241 217 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 AMHP03971 560 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 APPP05067 770 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 TXNP10599 105 aaKnown RBP8.62□□□□□ -1.03
CIITA-214ENST00000636238 ZP2Q05996 745 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 PPARAQ07869 468 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 SYDE2Q5VT97 1194 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 CCDC62Q6P9F0 684 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 RNF207Q6ZRF8 634 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 FBXL18Q96ME1 805 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 IWS1Q96ST2 819 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 LMAN2LQ9H0V9 348 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 GTF2IRD1Q9UHL9 959 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 ANAPC4Q9UJX5 808 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 STX8Q9UNK0 236 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.62□□□□□ -1.03
CIITA-214ENST00000636238 RWDD3Q9Y3V2 267 aa8.62□□□□□ -1.03
CIITA-214ENST00000636238 RBM8AQ9Y5S9 174 aaKnown RBP8.62□□□□□ -1.03
CIITA-214ENST00000636238 PTPDC1A2A3K4 754 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 TSPY2A6NKD2 308 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 H3BNC9 293 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 ORC4O43929 436 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 LGR5O75473 907 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 RB1P06400 928 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 FGRP09769 529 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 TOP1P11387 765 aaKnown RBP8.61□□□□□ -1.03
CIITA-214ENST00000636238 PCP11498 1178 aaKnown RBP8.61□□□□□ -1.03
CIITA-214ENST00000636238 CKBP12277 381 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 HOXD8P13378 290 aaPredicted RBP8.61□□□□□ -1.03
CIITA-214ENST00000636238 IL9P15248 144 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 HSPA4P34932 840 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 NUBP1P53384 320 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 PTPN5P54829 565 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 MKRN4PQ13434 485 aaPredicted RBP8.61□□□□□ -1.03
CIITA-214ENST00000636238 GPNMBQ14956 572 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 DGKDQ16760 1214 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 HERC4Q5GLZ8 1057 aaPredicted RBP8.61□□□□□ -1.03
CIITA-214ENST00000636238 VPS53Q5VIR6 699 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 FAM43BQ6ZT52 329 aaPredicted RBP8.61□□□□□ -1.03
CIITA-214ENST00000636238 KCTD1Q719H9 257 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 RASEFQ8IZ41 740 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 C7orf31Q8N865 590 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 CLEC4DQ8WXI8 215 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 MAP4K1Q92918 833 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 UIMC1Q96RL1 719 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 CTAGE1Q96RT6 745 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 NAPBQ9H115 298 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 NSUN3Q9H649 340 aaKnown RBP8.61□□□□□ -1.03
CIITA-214ENST00000636238 TCP11L1Q9NUJ3 509 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 SCN10AQ9Y5Y9 1956 aa8.61□□□□□ -1.03
CIITA-214ENST00000636238 REV3LO60673 3130 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 BRWD1Q9NSI6 2320 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 NFIBO00712 420 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms