RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	MMP19	Q99542	508 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ZFYVE28	Q9HCC9	887 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	KCNMB3	Q9NPA1	279 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CPA4	Q9UI42	421 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	LRRC37A2	A6NM11	1700 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ASTN1	O14525	1302 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	POTEB2	H3BUK9	544 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	MEIS1	O00470	390 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	TBX3	O15119	743 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CA12	O43570	354 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	TRAK2	O60296	914 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CMA1	P23946	247 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	MAPK4	P31152	587 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ZNF76	P36508	570 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	MRPS9	P82933	396 aa	Known RBP	10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CNTN2	Q02246	1040 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	KLHL40	Q2TBA0	621 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CEP55	Q53EZ4	464 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PRR16	Q569H4	304 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	SHC4	Q6S5L8	630 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	DTHD1	Q6ZMT9	781 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	NIPA1	Q7RTP0	329 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	VSIG10L	Q86VR7	867 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CYP2W1	Q8TAV3	490 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ETNPPL	Q8TBG4	499 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	HAS1	Q92839	578 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	IWS1	Q96ST2	819 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CSRNP2	Q9H175	543 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	UBIAD1	Q9Y5Z9	338 aa		10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	DDX49	Q9Y6V7	483 aa	Known RBP	10.86	□□□□□ -0.67
CACNA1A-223	ENST00000636058	FAM237A	A0A1B0GTK4	181 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	VWA3A	A6NCI4	1184 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	SOWAHB	A6NEL2	793 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	MSH4	O15457	936 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	STRN	O43815	780 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PGK2	P07205	417 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	NR3C2	P08235	984 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ITGB5	P18084	799 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	EDNRB	P24530	442 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CCND2	P30279	289 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	MAP2K2	P36507	400 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	LONP1	P36776	959 aa	Known RBP	10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	VEGFB	P49765	207 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ALDH5A1	P51649	535 aa	Predicted RBP	10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	SET	Q01105	290 aa	Predicted RBP	10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	WDR78	Q5VTH9	848 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	RESP18	Q5W5W9	173 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	GPR142	Q7Z601	462 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CCAR1	Q8IX12	1150 aa	Known RBP	10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	SLFN12	Q8IYM2	578 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	MRPS27	Q92552	414 aa	Known RBP	10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	FGD4	Q96M96	766 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	MXRA8	Q9BRK3	442 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	GOLPH3L	Q9H4A5	285 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ADD3	Q9UEY8	706 aa	Known RBP	10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	HPSE	Q9Y251	543 aa		10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.85	□□□□□ -0.67
CACNA1A-223	ENST00000636058	LOC102724159	A0A0B4J2E5	919 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	STAM2	O75886	525 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	MYCL	P12524	364 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	LIG1	P18858	919 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ADORA2A	P29274	412 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	TXK	P42681	527 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	FXR2	P51116	673 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	HTRA3	P83110	453 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	GRB14	Q14449	540 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PWP2	Q15269	919 aa	Known RBP	10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	TPRN	Q4KMQ1	711 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PLEKHH3	Q7Z736	793 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PLA2G4D	Q86XP0	818 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	IGSF22	Q8N9C0	903 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	FSIP1	Q8NA03	581 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ENGASE	Q8NFI3	743 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ZFP91	Q96JP5	570 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	AK8	Q96MA6	479 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	FAM20A	Q96MK3	541 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	INPP4A	Q96PE3	977 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CFHR5	Q9BXR6	569 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	JADE2	Q9NQC1	790 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	IVNS1ABP	Q9Y6Y0	642 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PLXNA1	Q9UIW2	1896 aa		10.84	□□□□□ -0.67
CACNA1A-223	ENST00000636058		A0A1B0GVL5	298 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	SLC15A5	A6NIM6	579 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	RGS20	O76081	388 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	AR	P10275	920 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	PFKFB1	P16118	471 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	TEC	P42680	631 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	NDUFA8	P51970	172 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	FAM160A1	Q05DH4	1040 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	SNW1	Q13573	536 aa	Known RBP	10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	MTMR1	Q13613	665 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	PDIA5	Q14554	519 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	STXBP2	Q15833	593 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	TMEM266	Q2M3C6	531 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	ZNF792	Q3KQV3	632 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	SPECC1	Q5M775	1068 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	CCDC73	Q6ZRK6	1079 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	USP49	Q70CQ1	688 aa		10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.83	□□□□□ -0.68
CACNA1A-223	ENST00000636058	MORC4	Q8TE76	937 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms