RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 JRKLQ9Y4A0 524 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 TAF5LO75529 589 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 ANP32DO95626 131 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 MYL3P08590 195 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 HLA-DPA1P20036 260 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 PSMA3P25788 255 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 CTDSPL2Q05D32 466 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 MED21Q13503 144 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 MEI1Q5TIA1 1274 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 CCDC127Q96BQ5 260 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 TBC1D32Q96NH3 1257 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 NLRC4Q9NPP4 1024 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 OGFRQ9NZT2 677 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 STK17AQ9UEE5 414 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 BAIAP2L1Q9UHR4 511 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 DENND3A2RUS2 1198 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 RASGRF2O14827 1237 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 PAPOLAP51003 745 aaKnown RBP6.01□□□□□ -1.45
SCN1A-209ENST00000635750 SESN3P58005 492 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 FANCCQ00597 558 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 OCRLQ01968 901 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 MECOMQ03112 1051 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 PSMD2Q13200 908 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 LRCH2Q5VUJ6 765 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 STAG1Q8WVM7 1258 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 PHF21AQ96BD5 680 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 TRPV6Q9H1D0 765 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 UPF3AQ9H1J1 476 aaKnown RBP6.01□□□□□ -1.45
SCN1A-209ENST00000635750 RPF1Q9H9Y2 349 aaKnown RBP6.01□□□□□ -1.45
SCN1A-209ENST00000635750 KMT5AQ9NQR1 393 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 FIS1Q9Y3D6 152 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.01□□□□□ -1.45
SCN1A-209ENST00000635750 MEIS1O00470 390 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 FOSP01100 380 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-209ENST00000635750 RWDD4Q6NW29 188 aaKnown RBP6.01□□□□□ -1.45
SCN1A-209ENST00000635750 NT5C1BQ96P26 610 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 ZNF577Q9BSK1 485 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 TSSK1BQ9BXA7 367 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 USP26Q9BXU7 913 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 KDM4CQ9H3R0 1056 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 TAB2Q9NYJ8 693 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 MAGED2Q9UNF1 606 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-209ENST00000635750 DAAM1Q9Y4D1 1078 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 NCKAP5LQ9HCH0 1330 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 TNNI3KQ59H18 835 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 SPOPLQ6IQ16 392 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 SPATS2Q86XZ4 545 aaKnown RBP6□□□□□ -1.45
SCN1A-209ENST00000635750 HINFPQ9BQA5 517 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 MRPL47Q9HD33 250 aaKnown RBP6□□□□□ -1.45
SCN1A-209ENST00000635750 PCDHB8Q9UN66 801 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 SAR1BQ9Y6B6 198 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 FPGT-TNNI3KV9GXZ4 949 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 ARHGEF10O15013 1369 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 CDK13Q14004 1512 aaKnown RBP6□□□□□ -1.45
SCN1A-209ENST00000635750 PRPSAP2O60256 369 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 VCPP55072 806 aaKnown RBP6□□□□□ -1.45
SCN1A-209ENST00000635750 DEUP1Q05D60 604 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 DARS2Q6PI48 645 aaKnown RBP6□□□□□ -1.45
SCN1A-209ENST00000635750 RRM2BQ7LG56 351 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 PCGF5Q86SE9 256 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 DIS3L2Q8IYB7 885 aaKnown RBP6□□□□□ -1.45
SCN1A-209ENST00000635750 MAGEB5Q9BZ81 275 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 SUN2Q9UH99 717 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 RIPOR2Q9Y4F9 1068 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 SYNDIG1LA6NDD5 238 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 GOLGA8KD6RF30 607 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 POC1B-GALNT4F8VUJ3 575 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 ARIH2O95376 493 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 MSH2P43246 934 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 TSPY1Q01534 308 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 FOXD4Q12950 439 aaPredicted RBP6□□□□□ -1.45
SCN1A-209ENST00000635750 ZNF653Q96CK0 615 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 CCDC51Q96ER9 411 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 OLFML3Q9NRN5 406 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 FGFR1OP2Q9NVK5 253 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 DNMBPQ6XZF7 1577 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 MOCS3O95396 460 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 GCP02774 474 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 GSNP06396 782 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 RCN2Q14257 317 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 ZNF790Q6PG37 636 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 NCLNQ969V3 563 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 DDX50Q9BQ39 737 aaKnown RBP6□□□□□ -1.45
SCN1A-209ENST00000635750 TUBB6Q9BUF5 446 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 ASPSCR1Q9BZE9 553 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 CUEDC2Q9H467 287 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 RIMS2Q9UQ26 1411 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 ZNF532Q9HCE3 1301 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 CCDC151A5D8V7 595 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 SYCE1LA8MT33 242 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 ZBBXA8MT70 800 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 MYO1DO94832 1006 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 PRIM1P49642 420 aaKnown RBP6□□□□□ -1.45
SCN1A-209ENST00000635750 TRMT10CQ7L0Y3 403 aaKnown RBP6□□□□□ -1.45
SCN1A-209ENST00000635750 KIAA0825Q8IV33 1275 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 GIMAP8Q8ND71 665 aaPredicted RBP6□□□□□ -1.45
SCN1A-209ENST00000635750 PBXIP1Q96AQ6 731 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 VPS39Q96JC1 886 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 ZFP42Q96MM3 310 aa6□□□□□ -1.45
SCN1A-209ENST00000635750 PACSIN2Q9UNF0 486 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms