RNA–Protein interactions for RNA: ENST00000634620.1

ATP7B-213, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 5,653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-213ENST00000634620 PNMA1Q8ND90 353 aa11.94□□□□□ -0.5
ATP7B-213ENST00000634620 DDX27Q96GQ7 796 aaKnown RBP11.94□□□□□ -0.5
ATP7B-213ENST00000634620 RAB3IPQ96QF0 476 aaPredicted RBP11.94□□□□□ -0.5
ATP7B-213ENST00000634620 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.94□□□□□ -0.5
ATP7B-213ENST00000634620 CAPS2Q9BXY5 557 aa11.94□□□□□ -0.5
ATP7B-213ENST00000634620 HOXC10Q9NYD6 342 aa11.94□□□□□ -0.5
ATP7B-213ENST00000634620 ITSN1Q15811 1721 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 DIP2AQ14689 1571 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 KRT9P35527 623 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 RASSF2P50749 326 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 UBL4BQ8N7F7 174 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 BCAS4Q8TDM0 211 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 STAMQ92783 540 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 IQCDQ96DY2 449 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 ALDH8A1Q9H2A2 487 aaPredicted RBP11.93□□□□□ -0.5
ATP7B-213ENST00000634620 TPX2Q9ULW0 747 aaKnown RBP11.93□□□□□ -0.5
ATP7B-213ENST00000634620 CYP2B6P20813 491 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 TNFAIP3P21580 790 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 ARHGEF16Q5VV41 709 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 MCF2L2Q86YR7 1114 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 TTLL11Q8NHH1 800 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 RPGRIP1Q96KN7 1286 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 SEC31BQ9NQW1 1179 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 TSKSQ9UJT2 592 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 CALUO43852 315 aaPredicted RBP11.93□□□□□ -0.5
ATP7B-213ENST00000634620 ASNSP08243 561 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
ATP7B-213ENST00000634620 DHX36Q9H2U1 1008 aaKnown RBP11.93□□□□□ -0.5
ATP7B-213ENST00000634620 PYCARDQ9ULZ3 195 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 ADAMTS13Q76LX8 1427 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 EFCAB8A8MWE9 144 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 RNF40O75150 1001 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 TMOD1P28289 359 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 SNCBQ16143 134 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 C11orf57Q6ZUT1 292 aaPredicted RBP11.93□□□□□ -0.5
ATP7B-213ENST00000634620 PIH1D3Q9NQM4 214 aaKnown RBP11.93□□□□□ -0.5
ATP7B-213ENST00000634620 FBXO40Q9UH90 709 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 FRMD3A2A2Y4 597 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 RARBP10826 455 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 RAG1P15918 1043 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 BTDP43251 543 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 FANCLQ9NW38 375 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 ASIC3Q9UHC3 531 aa11.93□□□□□ -0.5
ATP7B-213ENST00000634620 IKBKBO14920 756 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 MAGEA1P43355 309 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 ADKP55263 362 aaKnown RBP11.92□□□□□ -0.5
ATP7B-213ENST00000634620 PHLDB3Q6NSJ2 640 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 PPP1R21Q6ZMI0 780 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 MSANTD4Q8NCY6 345 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 MAK16Q9BXY0 300 aaKnown RBP11.92□□□□□ -0.5
ATP7B-213ENST00000634620 SPATS2LQ9NUQ6 558 aaKnown RBP11.92□□□□□ -0.5
ATP7B-213ENST00000634620 KIF20BQ96Q89 1820 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 TTC36A6NLP5 189 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 MMP14P50281 582 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 ICA1Q05084 483 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 MORC3Q14149 939 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 Q3C1V9 767 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 TMCO4Q5TGY1 634 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 LCORLQ8N3X6 602 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 SYMPKQ92797 1274 aaKnown RBP11.92□□□□□ -0.5
ATP7B-213ENST00000634620 DDX41Q9UJV9 622 aaKnown RBP11.92□□□□□ -0.5
ATP7B-213ENST00000634620 FRMD4BQ9Y2L6 1034 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 RRP15Q9Y3B9 282 aaKnown RBP11.92□□□□□ -0.5
ATP7B-213ENST00000634620 USH1CQ9Y6N9 552 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 KCNJ18B7U540 433 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 LUC7L3O95232 432 aaKnown RBP11.92□□□□□ -0.5
ATP7B-213ENST00000634620 LONP1P36776 959 aaKnown RBP11.92□□□□□ -0.5
ATP7B-213ENST00000634620 KCNJ12Q14500 433 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 DIXDC1Q155Q3 683 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 ANKRD20A3Q5VUR7 823 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 DENND2CQ68D51 928 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 DPH6Q7L8W6 267 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 FAM71BQ8TC56 605 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 MGARPQ8TDB4 240 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 TRIM4Q9C037 500 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 SUDS3Q9H7L9 328 aaPredicted RBP11.92□□□□□ -0.5
ATP7B-213ENST00000634620 USP17L5A8MUK1 530 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 COL3A1P02461 1466 aaPredicted RBP11.92□□□□□ -0.5
ATP7B-213ENST00000634620 NBPF20Q3BBV1 942 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 GSDMBQ8TAX9 411 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 ZDHHC9Q9Y397 364 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 SAR1BQ9Y6B6 198 aa11.92□□□□□ -0.5
ATP7B-213ENST00000634620 I3L4J1 428 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 MMP1P03956 469 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 TRAPPC10P48553 1259 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 ATP1A2P50993 1020 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 SPATA1Q5VX52 437 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 FCHSD1Q86WN1 690 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 STAG1Q8WVM7 1258 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 GCNAQ96QF7 691 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 NMRK2Q9NPI5 230 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 RAB23Q9ULC3 237 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 ZBTB21Q9ULJ3 1066 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 CNTNAP4Q9C0A0 1308 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 CTNNA1P35221 906 aaKnown RBP11.91□□□□□ -0.5
ATP7B-213ENST00000634620 LIFRP42702 1097 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 RBBP5Q15291 538 aaKnown RBP11.91□□□□□ -0.5
ATP7B-213ENST00000634620 TBC1D31Q96DN5 1066 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 AGTPBP1Q9UPW5 1226 aa11.91□□□□□ -0.5
ATP7B-213ENST00000634620 TACC3Q9Y6A5 838 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms