RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 ZNF747Q9BV97 191 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 NKX2-4Q9H2Z4 354 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 ST6GALNAC2Q9UJ37 374 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 FAN1Q9Y2M0 1017 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 TSC22D4Q9Y3Q8 395 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 HCFC2Q9Y5Z7 792 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 AGRPO00253 132 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 SCG5P05408 212 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 FGRP09769 529 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 HOXC12P31275 282 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 SLC6A11P48066 632 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ARID5AQ03989 594 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 CDSNQ15517 529 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ACBD5Q5T8D3 534 aaPredicted RBP4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 WWC2Q6AWC2 1192 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 RIOX2Q8IUF8 465 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 Q8N1Y9 231 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 KISS1RQ969F8 398 aaPredicted RBP4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ANAPC16Q96DE5 110 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 MTA3Q9BTC8 594 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 MCMBPQ9BTE3 642 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 VPS11Q9H270 941 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 NGRNQ9NPE2 291 aaKnown RBP4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 FAM86C1Q9NVL1 165 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 DBR1Q9UK59 544 aaKnown RBP4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 PCDHB10Q9UN67 800 aa4.71□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 KLF10Q13118 480 aa4.7□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 DPY19L1Q2PZI1 675 aa4.7□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ZNF761Q86XN6 746 aaPredicted RBP4.7□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 TINF2Q9BSI4 451 aa4.7□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 SSBP3Q9BWW4 388 aaPredicted RBP4.7□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 APEX2Q9UBZ4 518 aa4.7□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 HS3ST3A1Q9Y663 406 aa4.7□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 F8W031 263 aaPredicted RBP4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 SMAD7O15105 426 aaKnown RBP4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 MYO1BO43795 1136 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 SUSD5O60279 629 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 VAMP4O75379 141 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 KCNH1O95259 989 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 AMHP03971 560 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 SARSP49591 514 aaKnown RBP4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 SCRN1Q12765 414 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 CHRNA2Q15822 529 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 MROH9Q5TGP6 573 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 GTF2IRD2BQ6EKJ0 949 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 EEPD1Q7L9B9 569 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 B3GNT8Q7Z7M8 397 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 GTF2IRD2Q86UP8 949 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 FAM178BQ8IXR5 827 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 SEC14L1Q92503 715 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ALG3Q92685 438 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 AP5M1Q9H0R1 490 aa4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ING1Q9UK53 422 aaPredicted RBP4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 R3HCC1Q9Y3T6 440 aaKnown RBP4.69□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 C7orf72A4D263 438 aa4.68□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 IQCA1LA6NCM1 817 aa4.68□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 MC3RP41968 323 aa4.68□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 RPL11P62913 178 aaKnown RBP4.68□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 PRR5P85299 388 aa4.68□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ZNF227Q86WZ6 799 aa4.68□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 NPLOC4Q8TAT6 608 aa4.68□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ZNF669Q96BR6 464 aaPredicted RBP4.68□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 SGSM3Q96HU1 749 aa4.68□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 NTMQ9P121 344 aa4.68□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 MEFVO15553 781 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 THBDP07204 575 aa4.67□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 PLS3P13797 630 aa4.67□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 CACNB2Q08289 660 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 MAP4K2Q12851 820 aa4.67□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 C6orf15Q6UXA7 325 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 MIB1Q86YT6 1006 aa4.67□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 USP33Q8TEY7 942 aa4.67□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 SPATA6Q9NWH7 488 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 C11orf21Q9P2W6 132 aa4.67□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 TIMM13Q9Y5L4 95 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 X6R8D5 127 aa4.67□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 H7BY64 318 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 DDAH1O94760 285 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ASGR2P07307 311 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 TACR1P25103 407 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 LARP1BQ659C4 914 aaKnown RBP4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 GLB1LQ6UWU2 654 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 RSPO2Q6UXX9 243 aaPredicted RBP4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 LIMS2Q7Z4I7 341 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ZC3H18Q86VM9 953 aaKnown RBP4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 CPNE8Q86YQ8 564 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ST13P5Q8NFI4 369 aaPredicted RBP4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 PLEKHO2Q8TD55 490 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 DIO2Q92813 273 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ZNF408Q9H9D4 720 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 CLEC1BQ9P126 229 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 LRP2BPQ9P2M1 347 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 INVSQ9Y283 1065 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 ZNF652Q9Y2D9 606 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 RWDD3Q9Y3V2 267 aa4.66□□□□□ -1.66
NPHP3-ACAD11-202ENST00000632629 MAFKO60675 156 aa4.65□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 ITGAVP06756 1048 aa4.65□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 LTBRP36941 435 aa4.65□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 GFRA1P56159 465 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms