RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 CALM1P0DP23 149 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 CALM2P0DP24 149 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 CALM3P0DP25 149 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 APOA5Q6Q788 366 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 TMTC3Q6ZXV5 915 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 Q7L0L9 218 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 KCNB2Q92953 911 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 RRP36Q96EU6 259 aaKnown RBP12.46□□□□□ -0.41
CHD2-217ENST00000629136 LZTS2Q9BRK4 669 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 MTG1Q9BT17 334 aaPredicted RBP12.46□□□□□ -0.41
CHD2-217ENST00000629136 SEZ6LQ9BYH1 1024 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 TRPV6Q9H1D0 765 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 ALDH8A1Q9H2A2 487 aaPredicted RBP12.46□□□□□ -0.41
CHD2-217ENST00000629136 DDX41Q9UJV9 622 aaKnown RBP12.46□□□□□ -0.41
CHD2-217ENST00000629136 SLC12A7Q9Y666 1083 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 GH1P01241 217 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 NEFLP07196 543 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 MYCLP12524 364 aaPredicted RBP12.45□□□□□ -0.42
CHD2-217ENST00000629136 CSF2RAP15509 400 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 HSPA4P34932 840 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 GNAQP50148 359 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 DHX32Q7L7V1 743 aaKnown RBP12.45□□□□□ -0.42
CHD2-217ENST00000629136 VSIG10LQ86VR7 867 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 FCHSD1Q86WN1 690 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 FANCBQ8NB91 859 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 PPP1R13LQ8WUF5 828 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 AFG1LQ8WV93 481 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 GPKOWQ92917 476 aaPredicted RBP eCLIP12.45□□□□□ -0.421e-18■□□□□ 10.4
CHD2-217ENST00000629136 EMID1Q96A84 441 aaPredicted RBP12.45□□□□□ -0.42
CHD2-217ENST00000629136 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
CHD2-217ENST00000629136 SEC63Q9UGP8 760 aaKnown RBP12.45□□□□□ -0.42
CHD2-217ENST00000629136 BRPF3Q9ULD4 1205 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 MRVI1Q9Y6F6 885 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 SIP14410 1827 aa12.45□□□□□ -0.42
CHD2-217ENST00000629136 hCG_1642624A0A1W2PR95 340 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 MEIS2O14770 477 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 CPA1P15085 419 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 UBA1P22314 1058 aaKnown RBP12.44□□□□□ -0.42
CHD2-217ENST00000629136 CCND2P30279 289 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 CYP2C18P33260 490 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 MRPS9P82933 396 aaKnown RBP12.44□□□□□ -0.42
CHD2-217ENST00000629136 SP2Q02086 613 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 KRT32Q14532 448 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 NBPF20Q3BBV1 942 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 BRDTQ58F21 947 aaPredicted RBP12.44□□□□□ -0.42
CHD2-217ENST00000629136 USP17L6PQ6QN14 398 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 C16orf59Q7L2K0 433 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 CCDC82Q8N4S0 544 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 RNPC3Q96LT9 517 aaKnown RBP12.44□□□□□ -0.42
CHD2-217ENST00000629136 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.44□□□□□ -0.422e-12■□□□□ 9.6
CHD2-217ENST00000629136 NOC4LQ9BVI4 516 aaKnown RBP12.44□□□□□ -0.42
CHD2-217ENST00000629136 WNT8AQ9H1J5 351 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 HIPK3Q9H422 1215 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 TRMT13Q9NUP7 481 aaKnown RBP12.44□□□□□ -0.42
CHD2-217ENST00000629136 SNX14Q9Y5W7 946 aa12.44□□□□□ -0.42
CHD2-217ENST00000629136 EYSQ5T1H1 3165 aa12.43□□□□□ -0.42
CHD2-217ENST00000629136 PIK3CDO00329 1044 aa12.43□□□□□ -0.42
CHD2-217ENST00000629136 KPNA6O60684 536 aa12.43□□□□□ -0.42
CHD2-217ENST00000629136 FUT2Q10981 343 aa12.43□□□□□ -0.42
CHD2-217ENST00000629136 PPIGQ13427 754 aaKnown RBP eCLIP12.43□□□□□ -0.424e-15■□□□□ 10.7
CHD2-217ENST00000629136 TMEM240Q5SV17 173 aa12.43□□□□□ -0.42
CHD2-217ENST00000629136 TMEM199Q8N511 208 aa12.43□□□□□ -0.42
CHD2-217ENST00000629136 DEFB123Q8N688 67 aa12.43□□□□□ -0.42
CHD2-217ENST00000629136 KAT2BQ92831 832 aa12.43□□□□□ -0.42
CHD2-217ENST00000629136 INPP4AQ96PE3 977 aaPredicted RBP12.43□□□□□ -0.42
CHD2-217ENST00000629136 RBM28Q9NW13 759 aaKnown RBP12.43□□□□□ -0.42
CHD2-217ENST00000629136 TET1Q8NFU7 2136 aa12.43□□□□□ -0.42
CHD2-217ENST00000629136 NID2Q14112 1375 aa12.43□□□□□ -0.42
CHD2-217ENST00000629136 WDR81Q562E7 1941 aa12.43□□□□□ -0.42
CHD2-217ENST00000629136 KLF18A0A0U1RQI7 1052 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 ZBTB43O43298 467 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 SORBS3O60504 671 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 GGPS1O95749 300 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 F2P00734 622 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 CYP2C9P11712 490 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 HOXD8P13378 290 aaPredicted RBP12.42□□□□□ -0.42
CHD2-217ENST00000629136 CDC27P30260 824 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 PTPN11Q06124 597 aaPredicted RBP12.42□□□□□ -0.42
CHD2-217ENST00000629136 SEMA3FQ13275 785 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 HSDL1Q3SXM5 330 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 FAM47CQ5HY64 1035 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 RASIP1Q5U651 963 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 MYSM1Q5VVJ2 828 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 NFRKBQ6P4R8 1299 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 PPTC7Q8NI37 304 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 SMARCC2Q8TAQ2 1214 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 VWCEQ96DN2 955 aa12.42□□□□□ -0.42
CHD2-217ENST00000629136 FAM217BQ9NTX9 383 aaPredicted RBP12.42□□□□□ -0.42
CHD2-217ENST00000629136 GOLGA8AA7E2F4 631 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 GOLGA8BA8MQT2 603 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 REC8O95072 547 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 HMGB1P09429 215 aaKnown RBP12.41□□□□□ -0.42
CHD2-217ENST00000629136 ZNF286BP0CG31 522 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 ACRP10323 421 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 TGFB3P10600 412 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 RCAN1P53805 252 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 CCL23P55773 120 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 SMAD3P84022 425 aaKnown RBP12.41□□□□□ -0.42
CHD2-217ENST00000629136 LAMC2Q13753 1193 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 DGKDQ16760 1214 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms