RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 SYNE3Q6ZMZ3 975 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 TLK2Q86UE8 772 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 COPS5Q92905 334 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 ZNF274Q96GC6 653 aaPredicted RBP12.81□□□□□ -0.36
DDX41-219ENST00000629036 WDR11Q9BZH6 1224 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 PDRG1Q9NUG6 133 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 BARHL2Q9NY43 387 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 SEC63Q9UGP8 760 aaKnown RBP12.81□□□□□ -0.36
DDX41-219ENST00000629036 TPCN1Q9ULQ1 816 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 Q9Y3F1 56 aa12.81□□□□□ -0.36
DDX41-219ENST00000629036 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
DDX41-219ENST00000629036 CHD9Q3L8U1 2897 aa12.8□□□□□ -0.36
DDX41-219ENST00000629036 LARGE1O95461 756 aa12.8□□□□□ -0.36
DDX41-219ENST00000629036 CLK2P49760 499 aaKnown RBP12.8□□□□□ -0.36
DDX41-219ENST00000629036 AK2P54819 239 aa12.8□□□□□ -0.36
DDX41-219ENST00000629036 BEX3Q00994 111 aa12.8□□□□□ -0.36
DDX41-219ENST00000629036 ARHGAP1Q07960 439 aa12.8□□□□□ -0.36
DDX41-219ENST00000629036 KCNA10Q16322 511 aa12.8□□□□□ -0.36
DDX41-219ENST00000629036 UBE2SQ16763 222 aa12.8□□□□□ -0.36
DDX41-219ENST00000629036 PFKFB3Q16875 520 aaPredicted RBP12.8□□□□□ -0.36
DDX41-219ENST00000629036 RNF180Q86T96 592 aa12.8□□□□□ -0.36
DDX41-219ENST00000629036 SCFD2Q8WU76 684 aa12.8□□□□□ -0.36
DDX41-219ENST00000629036 PHKBQ93100 1093 aa12.8□□□□□ -0.36
DDX41-219ENST00000629036 SENP6Q9GZR1 1112 aaPredicted RBP12.8□□□□□ -0.36
DDX41-219ENST00000629036 GRIN2DO15399 1336 aa12.8□□□□□ -0.36
DDX41-219ENST00000629036 MOXD2PA6NHM9 499 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 KBTBD13C9JR72 458 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 PRPF3O43395 683 aaKnown RBP12.79□□□□□ -0.36
DDX41-219ENST00000629036 EIF3JO75822 258 aaKnown RBP12.79□□□□□ -0.36
DDX41-219ENST00000629036 CTDNEP1O95476 244 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 C6orf222P0C671 652 aaPredicted RBP12.79□□□□□ -0.36
DDX41-219ENST00000629036 SCG2P13521 617 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 COL9A1P20849 921 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 CCT2P78371 535 aaKnown RBP12.79□□□□□ -0.36
DDX41-219ENST00000629036 MDM2Q00987 491 aaPredicted RBP12.79□□□□□ -0.36
DDX41-219ENST00000629036 SCRN1Q12765 414 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 NPY5RQ15761 445 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 FSCN1Q16658 493 aaKnown RBP12.79□□□□□ -0.36
DDX41-219ENST00000629036 ARHGEF16Q5VV41 709 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 SLC39A5Q6ZMH5 540 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 HEATR3Q7Z4Q2 680 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 FCHSD1Q86WN1 690 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 CRYGNQ8WXF5 182 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 FERMT2Q96AC1 680 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
DDX41-219ENST00000629036 RNF26Q9BY78 433 aaPredicted RBP12.79□□□□□ -0.36
DDX41-219ENST00000629036 RIC8AQ9NPQ8 531 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 RAPGEFL1Q9UHV5 662 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 SCN5AQ14524 2016 aa12.79□□□□□ -0.36
DDX41-219ENST00000629036 TTC28Q96AY4 2481 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 CCDC196A0A1B0GTZ2 297 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 ESYT2A0FGR8 921 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 hCG_1984214I3L0E3 225 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 PFKFB2O60825 505 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 PPFIA3O75145 1194 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 ASGR1P07306 291 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 HOXD8P13378 290 aaPredicted RBP12.78□□□□□ -0.36
DDX41-219ENST00000629036 RBM25P49756 843 aaKnown RBP12.78□□□□□ -0.36
DDX41-219ENST00000629036 CDK7P50613 346 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 ATN1P54259 1190 aaPredicted RBP12.78□□□□□ -0.36
DDX41-219ENST00000629036 RTP1P59025 263 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 FGD1P98174 961 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 SP2Q02086 613 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 STXBP2Q15833 593 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 TEX2Q8IWB9 1127 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 ZNF713Q8N859 430 aaPredicted RBP12.78□□□□□ -0.36
DDX41-219ENST00000629036 SLC43A3Q8NBI5 491 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 EMID1Q96A84 441 aaPredicted RBP12.78□□□□□ -0.36
DDX41-219ENST00000629036 ZFP91Q96JP5 570 aaPredicted RBP12.78□□□□□ -0.36
DDX41-219ENST00000629036 BCAS3Q9H6U6 928 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 PSTPIP2Q9H939 334 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 DDX41Q9UJV9 622 aaKnown RBP12.78□□□□□ -0.36
DDX41-219ENST00000629036 SIP14410 1827 aa12.78□□□□□ -0.36
DDX41-219ENST00000629036 A6NJR5 290 aa12.77□□□□□ -0.37
DDX41-219ENST00000629036 NKRFO15226 690 aaKnown RBP eCLIP12.77□□□□□ -0.37
DDX41-219ENST00000629036 DYNC1LI2O43237 492 aaPredicted RBP12.77□□□□□ -0.37
DDX41-219ENST00000629036 EDIL3O43854 480 aa12.77□□□□□ -0.37
DDX41-219ENST00000629036 DTNBO60941 627 aa12.77□□□□□ -0.37
DDX41-219ENST00000629036 UBA1P22314 1058 aaKnown RBP12.77□□□□□ -0.37
DDX41-219ENST00000629036 ICAM3P32942 547 aa12.77□□□□□ -0.37
DDX41-219ENST00000629036 NAPAP54920 295 aa12.77□□□□□ -0.37
DDX41-219ENST00000629036 ME3Q16798 604 aa12.77□□□□□ -0.37
DDX41-219ENST00000629036 LY6KQ17RY6 165 aa12.77□□□□□ -0.37
DDX41-219ENST00000629036 TRIM60Q495X7 471 aa12.77□□□□□ -0.37
DDX41-219ENST00000629036 GNASQ5JWF2 1037 aa12.77□□□□□ -0.37
DDX41-219ENST00000629036 PCNX4Q63HM2 1172 aa12.77□□□□□ -0.37
DDX41-219ENST00000629036 SEPT14Q6ZU15 432 aa12.77□□□□□ -0.37
DDX41-219ENST00000629036 ZMYND12Q9H0C1 365 aa12.77□□□□□ -0.37
DDX41-219ENST00000629036 NAP1L2Q9ULW6 460 aaPredicted RBP12.77□□□□□ -0.37
DDX41-219ENST00000629036 MYH9P35579 1960 aaKnown RBP12.76□□□□□ -0.37
DDX41-219ENST00000629036 KAT6AQ92794 2004 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 TET1Q8NFU7 2136 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 TXNP10599 105 aaKnown RBP12.76□□□□□ -0.37
DDX41-219ENST00000629036 CCND2P30279 289 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 PURAQ00577 322 aaKnown RBP12.76□□□□□ -0.37
DDX41-219ENST00000629036 TTLL4Q14679 1199 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 CXCL17Q6UXB2 119 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 ANKRD33Q7Z3H0 272 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 PCSK9Q8NBP7 692 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms