RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ZKSCAN4Q969J2 545 aaPredicted RBP8.34□□□□□ -1.07
PKP4-217ENST00000628904 CCDC127Q96BQ5 260 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 TRIM9Q9C026 710 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 DUSP10Q9Y6W6 482 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 MYH2Q9UKX2 1941 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 CCP110O43303 1012 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 USO1O60763 962 aaKnown RBP8.34□□□□□ -1.07
PKP4-217ENST00000628904 EGFRP00533 1210 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 PLA2G4BP0C869 781 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 ADAM9Q13443 819 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 GPATCH4Q5T3I0 446 aaKnown RBP8.34□□□□□ -1.07
PKP4-217ENST00000628904 FBXL16Q8N461 479 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 NEK11Q8NG66 645 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 P2RX5Q93086 422 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 SMARCAL1Q9NZC9 954 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 FAM198AQ9UFP1 575 aa8.34□□□□□ -1.07
PKP4-217ENST00000628904 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.34□□□□□ -1.071e-6■■■□□ 18.3
PKP4-217ENST00000628904 A0A1W2PRG0 241 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 CTAGE9A4FU28 777 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 ABCB4P21439 1286 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 SSR1P43307 286 aaKnown RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 TRAPPC10P48553 1259 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 RASSF7Q02833 373 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 SPAG1Q07617 926 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 EAPPQ56P03 285 aaPredicted RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 LRCH2Q5VUJ6 765 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 MYOCDQ8IZQ8 938 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 HOOK2Q96ED9 719 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 GOLPH3Q9H4A6 298 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 CHORDC1Q9UHD1 332 aaPredicted RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 CLEC11AQ9Y240 323 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 GOLGA8IPA6NC78 632 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 GOLGA8JA6NMD2 632 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 PPP1R11O60927 126 aaPredicted RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 LRRN2O75325 713 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 ERCC5P28715 1186 aaPredicted RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 JAG1P78504 1218 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 MKRN4PQ13434 485 aaPredicted RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 CCDC93Q567U6 631 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 CT47A1Q5JQC4 288 aaPredicted RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 CCDC65Q8IXS2 484 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 ZNF710Q8N1W2 664 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 ERMNQ8TAM6 284 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 BICD1Q96G01 975 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 ZMYND12Q9H0C1 365 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 CENPFP49454 3210 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 GYPCP04921 128 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 NR2F2P24468 414 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 MDM2Q00987 491 aaPredicted RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 KIF5AQ12840 1032 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 CRY2Q49AN0 593 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 ZC2HC1CQ53FD0 456 aaPredicted RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 STRIP1Q5VSL9 837 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 FBXO38Q6PIJ6 1188 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 TMED8Q6PL24 325 aaPredicted RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 ZNF579Q8NAF0 562 aaKnown RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 OR8K1Q8NGG5 319 aa8.33□□□□□ -1.08
PKP4-217ENST00000628904 LSM14BQ9BX40 385 aaKnown RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 EPN1Q9Y6I3 576 aaPredicted RBP8.33□□□□□ -1.08
PKP4-217ENST00000628904 FAM84AQ96KN4 292 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 GTPBP4Q9BZE4 634 aaKnown RBP8.32□□□□□ -1.08
PKP4-217ENST00000628904 PRR12Q9ULL5 1215 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 PACSIN2Q9UNF0 486 aaPredicted RBP8.32□□□□□ -1.08
PKP4-217ENST00000628904 HYOU1Q9Y4L1 999 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 BICDL2A1A5D9 508 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 ACTN1P12814 892 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 INPP5BP32019 993 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 GJC1P36383 396 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 NAALADL2Q58DX5 795 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 TMEM179Q6ZVK1 233 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 DPH6Q7L8W6 267 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 SFR1Q86XK3 245 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 TRIML1Q8N9V2 468 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 FLAD1Q8NFF5 587 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 ZNF526Q8TF50 670 aaPredicted RBP8.32□□□□□ -1.08
PKP4-217ENST00000628904 CCDC17Q96LX7 622 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 HSD3B7Q9H2F3 369 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 DNAJC18Q9H819 358 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 ZCCHC17Q9NP64 241 aaKnown RBP8.32□□□□□ -1.08
PKP4-217ENST00000628904 SWAP70Q9UH65 585 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 ZHX2Q9Y6X8 837 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 YDJCA8MPS7 323 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 H7C1D1 291 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 GCOM1H8Y6P7 765 aaPredicted RBP8.32□□□□□ -1.08
PKP4-217ENST00000628904 POLR2MP0CAP2 368 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 NMT1P30419 496 aaKnown RBP8.32□□□□□ -1.08
PKP4-217ENST00000628904 SSTR3P32745 418 aaPredicted RBP8.32□□□□□ -1.08
PKP4-217ENST00000628904 ECM1Q16610 540 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 DACT2Q5SW24 774 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 PPP1R18Q6NYC8 613 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 PDXDC2PQ6P474 469 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 GSPT2Q8IYD1 628 aaKnown RBP8.32□□□□□ -1.08
PKP4-217ENST00000628904 FAM133AQ8N9E0 248 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 JAKMIP2Q96AA8 810 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 ZNF577Q9BSK1 485 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 SPZ1Q9BXG8 430 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 FGFBP2Q9BYJ0 223 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 ADD3Q9UEY8 706 aaKnown RBP8.32□□□□□ -1.08
PKP4-217ENST00000628904 COL4A1P02462 1669 aa8.32□□□□□ -1.08
PKP4-217ENST00000628904 MFAP3LO75121 409 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms