RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 TBX21Q9UL17 535 aa18.36■□□□□ 0.53
CHRNA4-211ENST00000628606 ZBTB43O43298 467 aa18.35■□□□□ 0.53
CHRNA4-211ENST00000628606 SUPT20HL2P0C7V6 817 aa18.35■□□□□ 0.53
CHRNA4-211ENST00000628606 ITGB8P26012 769 aa18.35■□□□□ 0.53
CHRNA4-211ENST00000628606 COL9A3Q14050 684 aaPredicted RBP18.35■□□□□ 0.53
CHRNA4-211ENST00000628606 GPR153Q6NV75 609 aa18.35■□□□□ 0.53
CHRNA4-211ENST00000628606 APOA5Q6Q788 366 aa18.35■□□□□ 0.53
CHRNA4-211ENST00000628606 TMTC3Q6ZXV5 915 aa18.35■□□□□ 0.53
CHRNA4-211ENST00000628606 VSIG10LQ86VR7 867 aa18.35■□□□□ 0.53
CHRNA4-211ENST00000628606 TMEM199Q8N511 208 aa18.35■□□□□ 0.53
CHRNA4-211ENST00000628606 JAKMIP1Q96N16 626 aaKnown RBP18.35■□□□□ 0.53
CHRNA4-211ENST00000628606 CD4P01730 458 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 CASTP20810 708 aaKnown RBP18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 PSMA5P28066 241 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 HSPA4P34932 840 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 PPIGQ13427 754 aaKnown RBP eCLIP18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 LAMC2Q13753 1193 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 SHHQ15465 462 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 RTN1Q16799 776 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 GNPTABQ3T906 1256 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 FAM47CQ5HY64 1035 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 MFSD5Q6N075 450 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 BLOC1S2Q6QNY1 142 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 DHX37Q8IY37 1157 aaKnown RBP18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 AFG1LQ8WV93 481 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 PPP1R12CQ9BZL4 782 aa18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 DDX41Q9UJV9 622 aaKnown RBP18.34■□□□□ 0.53
CHRNA4-211ENST00000628606 MYH7BA7E2Y1 1941 aa18.33■□□□□ 0.53
CHRNA4-211ENST00000628606 GRIN2DO15399 1336 aa18.33■□□□□ 0.53
CHRNA4-211ENST00000628606 KLF18A0A0U1RQI7 1052 aa18.33■□□□□ 0.52
CHRNA4-211ENST00000628606 GOLGA8AA7E2F4 631 aa18.33■□□□□ 0.52
CHRNA4-211ENST00000628606 GOLGA8BA8MQT2 603 aa18.33■□□□□ 0.52
CHRNA4-211ENST00000628606 STAM2O75886 525 aa18.33■□□□□ 0.52
CHRNA4-211ENST00000628606 TGFB3P10600 412 aa18.33■□□□□ 0.52
CHRNA4-211ENST00000628606 DGKDQ16760 1214 aa18.33■□□□□ 0.52
CHRNA4-211ENST00000628606 NBPF20Q3BBV1 942 aa18.33■□□□□ 0.52
CHRNA4-211ENST00000628606 TRPV6Q9H1D0 765 aa18.33■□□□□ 0.52
CHRNA4-211ENST00000628606 ALDH8A1Q9H2A2 487 aaPredicted RBP18.33■□□□□ 0.52
CHRNA4-211ENST00000628606 HIPK3Q9H422 1215 aa18.33■□□□□ 0.52
CHRNA4-211ENST00000628606 PSTPIP2Q9H939 334 aa18.33■□□□□ 0.52
CHRNA4-211ENST00000628606 LAMA3Q16787 3333 aa18.33■□□□□ 0.52
CHRNA4-211ENST00000628606 PIK3CDO00329 1044 aa18.32■□□□□ 0.52
CHRNA4-211ENST00000628606 B4GALT4O60513 344 aa18.32■□□□□ 0.52
CHRNA4-211ENST00000628606 MMP3P08254 477 aa18.32■□□□□ 0.52
CHRNA4-211ENST00000628606 ARHGAP1Q07960 439 aa18.32■□□□□ 0.52
CHRNA4-211ENST00000628606 C9orf50Q5SZB4 431 aa18.32■□□□□ 0.52
CHRNA4-211ENST00000628606 NFRKBQ6P4R8 1299 aa18.32■□□□□ 0.52
CHRNA4-211ENST00000628606 USP17L6PQ6QN14 398 aa18.32■□□□□ 0.52
CHRNA4-211ENST00000628606 HEATR3Q7Z4Q2 680 aa18.32■□□□□ 0.52
CHRNA4-211ENST00000628606 KCNB2Q92953 911 aa18.32■□□□□ 0.52
CHRNA4-211ENST00000628606 RNPC3Q96LT9 517 aaKnown RBP18.32■□□□□ 0.52
CHRNA4-211ENST00000628606 SNX14Q9Y5W7 946 aa18.32■□□□□ 0.52
CHRNA4-211ENST00000628606 SZT2Q5T011 3432 aa18.31■□□□□ 0.52
CHRNA4-211ENST00000628606 CCDC196A0A1B0GTZ2 297 aa18.31■□□□□ 0.52
CHRNA4-211ENST00000628606 hCG_1642624A0A1W2PR95 340 aa18.31■□□□□ 0.52
CHRNA4-211ENST00000628606 EPB41L2O43491 1005 aaKnown RBP18.31■□□□□ 0.52
CHRNA4-211ENST00000628606 RCAN1P53805 252 aa18.31■□□□□ 0.52
CHRNA4-211ENST00000628606 Q6ZUG5 572 aa18.31■□□□□ 0.52
CHRNA4-211ENST00000628606 IL31RAQ8NI17 732 aa18.31■□□□□ 0.52
CHRNA4-211ENST00000628606 EMID1Q96A84 441 aaPredicted RBP18.31■□□□□ 0.52
CHRNA4-211ENST00000628606 MLXIPQ9HAP2 919 aa18.31■□□□□ 0.52
CHRNA4-211ENST00000628606 BRPF3Q9ULD4 1205 aa18.31■□□□□ 0.52
CHRNA4-211ENST00000628606 NOD1Q9Y239 953 aa18.31■□□□□ 0.52
CHRNA4-211ENST00000628606 SCN10AQ9Y5Y9 1956 aa18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 SPDYE3A6NKU9 549 aa18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 GGPS1O95749 300 aa18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 CYP2C18P33260 490 aa18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 METAP2P50579 478 aaKnown RBP eCLIP18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 PTPN11Q06124 597 aaPredicted RBP18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 XRRA1Q6P2D8 792 aa18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 DEFB123Q8N688 67 aa18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 PPTC7Q8NI37 304 aa18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 SPATA33Q96N06 139 aa18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 KATNAL1Q9BW62 490 aa18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 EHMT1Q9H9B1 1298 aa18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 TRMT13Q9NUP7 481 aaKnown RBP18.3■□□□□ 0.52
CHRNA4-211ENST00000628606 MEIS2O14770 477 aa18.29■□□□□ 0.52
CHRNA4-211ENST00000628606 RGS20O76081 388 aa18.29■□□□□ 0.52
CHRNA4-211ENST00000628606 CPA1P15085 419 aa18.29■□□□□ 0.52
CHRNA4-211ENST00000628606 CSF2RAP15509 400 aa18.29■□□□□ 0.52
CHRNA4-211ENST00000628606 CELF3Q5SZQ8 465 aaKnown RBP18.29■□□□□ 0.52
CHRNA4-211ENST00000628606 NLRX1Q86UT6 975 aa18.29■□□□□ 0.52
CHRNA4-211ENST00000628606 BRF1Q92994 677 aa18.29■□□□□ 0.52
CHRNA4-211ENST00000628606 ZFP91Q96JP5 570 aaPredicted RBP18.29■□□□□ 0.52
CHRNA4-211ENST00000628606 RTEL1Q9NZ71 1219 aa18.29■□□□□ 0.52
CHRNA4-211ENST00000628606 V9GY48 417 aaPredicted RBP18.29■□□□□ 0.52
CHRNA4-211ENST00000628606 FRMPD4Q14CM0 1322 aa18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 LAMA2P24043 3122 aaKnown RBP18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 NOP56O00567 594 aaKnown RBP18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 SORBS3O60504 671 aa18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 PPFIA4O75335 1185 aa18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 RPS6KB1P23443 525 aa18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 EPHB4P54760 987 aa18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 NAPAP54920 295 aa18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 APOBRQ0VD83 1088 aa18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 NEDD9Q14511 834 aa18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 MYSM1Q5VVJ2 828 aa18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 PCNX4Q63HM2 1172 aa18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 PSRC1Q6PGN9 363 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms