RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 SPDYE5A6NIY4 337 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 OPLAHO14841 1288 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 EDIL3O43854 480 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 CCNT1O60563 726 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 ZBED4O75132 1171 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 LETM1O95202 739 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 ICAM1P05362 532 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 AP3B2Q13367 1082 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 CATSPERGQ6ZRH7 1159 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 ERO1BQ86YB8 467 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 FMR1NBQ8N0W7 255 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 ATG4CQ96DT6 458 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 P2RX7Q99572 595 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 ANO3Q9BYT9 981 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 CSRNP2Q9H175 543 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 TMEM60Q9H2L4 133 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 SLC38A10Q9HBR0 1119 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 RAVER2Q9HCJ3 691 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 NMRK2Q9NPI5 230 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 CCPG1Q9ULG6 757 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 HPSEQ9Y251 543 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 CTDP1Q9Y5B0 961 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 ABCB11O95342 1321 aa11.28□□□□□ -0.6
SOX2-OT-244ENST00000627738 VWA3AA6NCI4 1184 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 KINO60870 393 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 FDX1P10109 184 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 HOXA13P31271 388 aaPredicted RBP11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 ORC2Q13416 577 aaPredicted RBP11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 COG2Q14746 738 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 IL17AQ16552 155 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 LDLRAD1Q5T700 205 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 ARL6IP4Q66PJ3 421 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 MCTP2Q6DN12 878 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 LRSAM1Q6UWE0 723 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 GAS2L3Q86XJ1 694 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 CPXCR1Q8N123 301 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 RDH13Q8NBN7 331 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 ZNF526Q8TF50 670 aaPredicted RBP11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 TBC1D5Q92609 795 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 TNMDQ9H2S6 317 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 FAM13BQ9NYF5 915 aa11.27□□□□□ -0.61
SOX2-OT-244ENST00000627738 SMCHD1A6NHR9 2005 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 A0A0G2JLL6 359 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 SPDYE3A6NKU9 549 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 GCOM1H8Y6P7 765 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 PIK3CDO00329 1044 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 LAD1O00515 517 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 VWA5AO00534 786 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 CXCL11O14625 94 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 NEMFO60524 1076 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 ZNF202O95125 648 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 TDP2O95551 362 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 CFBP00751 764 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 FOSP01100 380 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 OR52Z1P0C646 297 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 POLR2MP0CAP2 368 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 ALAS1P13196 640 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 SYKP43405 635 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 PPIL2Q13356 520 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 TREML2Q5T2D2 321 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 GADL1Q6ZQY3 521 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 USP49Q70CQ1 688 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 PRRT2Q7Z6L0 340 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 TEX2Q8IWB9 1127 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 CKAP2LQ8IYA6 745 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 WNK4Q96J92 1243 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 KCNH3Q9ULD8 1083 aa11.26□□□□□ -0.61
SOX2-OT-244ENST00000627738 PARP14Q460N5 1801 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 FSD2A1L4K1 749 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 GOLGA6L3A6NEY3 463 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 CTAGE5O15320 804 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 SLC37A4O43826 429 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 PRPHP41219 470 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 DTHD1Q6ZMT9 781 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 RBM43Q6ZSC3 357 aaKnown RBP11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 FCHSD1Q86WN1 690 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 REPS2Q8NFH8 660 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 CLEC4DQ8WXI8 215 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 SYMPKQ92797 1274 aaKnown RBP11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 OPTNQ96CV9 577 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 EPSTI1Q96J88 318 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 TIGD1Q96MW7 591 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 NAP1L4Q99733 375 aaKnown RBP11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 IRX2Q9BZI1 471 aaPredicted RBP11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 HOXC10Q9NYD6 342 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 PNMA2Q9UL42 364 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 ADAMTS5Q9UNA0 930 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 KCNH4Q9UQ05 1017 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 RLFQ13129 1914 aa11.25□□□□□ -0.61
SOX2-OT-244ENST00000627738 NFIBO00712 420 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 CELF2O95319 508 aaKnown RBP11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 GCFC2P16383 781 aaKnown RBP11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 GJA5P36382 358 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 LONP1P36776 959 aaKnown RBP11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 SREBF1P36956 1147 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 USP11P51784 963 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 ARHGAP4P98171 946 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 CALCRLQ16602 461 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 MUM1L1Q5H9M0 696 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 SWT1Q5T5J6 900 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms