RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 KIF11P52732 1056 aa21.29■■□□□ 1
PTBP1-220ENST00000627714 PRR5LQ6MZQ0 368 aa21.29■■□□□ 1
PTBP1-220ENST00000627714 LEKR1Q6ZMV7 388 aa21.29■■□□□ 1
PTBP1-220ENST00000627714 HPS3Q969F9 1004 aa21.29■■□□□ 1
PTBP1-220ENST00000627714 NAP1L4Q99733 375 aaKnown RBP21.29■■□□□ 1
PTBP1-220ENST00000627714 LTBP4Q8N2S1 1624 aa21.29■■□□□ 1
PTBP1-220ENST00000627714 MYO3BQ8WXR4 1341 aa21.29■■□□□ 1
PTBP1-220ENST00000627714 ZNF263O14978 683 aa21.29■■□□□ 1
PTBP1-220ENST00000627714 N4BP1O75113 896 aaKnown RBP21.29■■□□□ 1
PTBP1-220ENST00000627714 FRMPD2Q68DX3 1309 aaPredicted RBP21.28■■□□□ 1
PTBP1-220ENST00000627714 PNMA6FA0A0J9YX94 578 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 BBOX1O75936 387 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 TDP2O95551 362 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 GCFC2P16383 781 aaKnown RBP21.28■■□□□ 1
PTBP1-220ENST00000627714 LRRC55Q6ZSA7 311 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 SLC51AQ86UW1 340 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 MMGT1Q8N4V1 131 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 COG1Q8WTW3 980 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 NUCKS1Q9H1E3 243 aaKnown RBP21.28■■□□□ 1
PTBP1-220ENST00000627714 MMRN2Q9H8L6 949 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 FAM207AQ9NSI2 230 aaPredicted RBP21.28■■□□□ 1
PTBP1-220ENST00000627714 DUSP10Q9Y6W6 482 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 IGKV6D-41A0A0C4DH26 115 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 RPS6KA5O75582 802 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 TCP1P17987 556 aaKnown RBP21.28■■□□□ 1
PTBP1-220ENST00000627714 GABPAQ06546 454 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 DYMQ7RTS9 669 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 DDX12PQ92771 950 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 COA7Q96BR5 231 aa21.28■■□□□ 1
PTBP1-220ENST00000627714 SSU72P8A0A1W2PR75 194 aa21.27■■□□□ 1
PTBP1-220ENST00000627714 TULP2O00295 520 aa21.27■■□□□ 1
PTBP1-220ENST00000627714 PJA2O43164 708 aa21.27■■□□□ 1
PTBP1-220ENST00000627714 SLC26A4O43511 780 aa21.27■■□□□ 1
PTBP1-220ENST00000627714 AKR1B10O60218 316 aa21.27■■□□□ 1
PTBP1-220ENST00000627714 IVLP07476 585 aa21.27■■□□□ 1
PTBP1-220ENST00000627714 TNNT3P45378 269 aaPredicted RBP21.27■■□□□ 1
PTBP1-220ENST00000627714 CCDC155Q8N6L0 562 aa21.27■■□□□ 1
PTBP1-220ENST00000627714 NGLY1Q96IV0 654 aa21.27■■□□□ 1
PTBP1-220ENST00000627714 SWAP70Q9UH65 585 aa21.27■■□□□ 1
PTBP1-220ENST00000627714 SUGT1Q9Y2Z0 365 aa21.27■■□□□ 1
PTBP1-220ENST00000627714 THSD7AQ9UPZ6 1657 aa21.27■■□□□ 1
PTBP1-220ENST00000627714 KDM3AQ9Y4C1 1321 aa21.27■■□□□ 1
PTBP1-220ENST00000627714 POTEMA6NI47 508 aa21.27■□□□□ 0.99
PTBP1-220ENST00000627714 CAPN2P17655 700 aa21.27■□□□□ 0.99
PTBP1-220ENST00000627714 EIF4A3P38919 411 aaKnown RBP21.27■□□□□ 0.99
PTBP1-220ENST00000627714 MYOCDQ8IZQ8 938 aa21.27■□□□□ 0.99
PTBP1-220ENST00000627714 GOLGA6L1Q8N7Z2 621 aa21.27■□□□□ 0.99
PTBP1-220ENST00000627714 NT5C3AQ9H0P0 336 aa21.27■□□□□ 0.99
PTBP1-220ENST00000627714 HPCAL4Q9UM19 191 aa21.27■□□□□ 0.99
PTBP1-220ENST00000627714 EDIL3O43854 480 aa21.26■□□□□ 0.99
PTBP1-220ENST00000627714 TTLL1O95922 423 aa21.26■□□□□ 0.99
PTBP1-220ENST00000627714 PLEKP08567 350 aaPredicted RBP21.26■□□□□ 0.99
PTBP1-220ENST00000627714 CLK2P49760 499 aaKnown RBP21.26■□□□□ 0.99
PTBP1-220ENST00000627714 MRPL12P52815 198 aaKnown RBP21.26■□□□□ 0.99
PTBP1-220ENST00000627714 ZNF543Q08ER8 600 aa21.26■□□□□ 0.99
PTBP1-220ENST00000627714 MAPK8IP2Q13387 824 aaPredicted RBP21.26■□□□□ 0.99
PTBP1-220ENST00000627714 CCNI2Q6ZMN8 369 aaPredicted RBP21.26■□□□□ 0.99
PTBP1-220ENST00000627714 KRT26Q7Z3Y9 468 aa21.26■□□□□ 0.99
PTBP1-220ENST00000627714 CUL5Q93034 780 aa21.26■□□□□ 0.99
PTBP1-220ENST00000627714 TSPYL1Q9H0U9 437 aa21.26■□□□□ 0.99
PTBP1-220ENST00000627714 BMP2KQ9NSY1 1161 aaPredicted RBP21.26■□□□□ 0.99
PTBP1-220ENST00000627714 RNF216Q9NWF9 866 aaPredicted RBP21.26■□□□□ 0.99
PTBP1-220ENST00000627714 DAGLAQ9Y4D2 1042 aa21.26■□□□□ 0.99
PTBP1-220ENST00000627714 LRRC53A6NM62 1247 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 TNNI2P48788 182 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 FKBP3Q00688 224 aaKnown RBP21.25■□□□□ 0.99
PTBP1-220ENST00000627714 HYIQ5T013 277 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 RRAGAQ7L523 313 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 CREG2Q8IUH2 290 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 BAP1Q92560 729 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 SYN2Q92777 582 aaPredicted RBP21.25■□□□□ 0.99
PTBP1-220ENST00000627714 DDX25Q9UHL0 483 aaKnown RBP21.25■□□□□ 0.99
PTBP1-220ENST00000627714 HYOU1Q9Y4L1 999 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 PDE2AO00408 941 aaPredicted RBP21.25■□□□□ 0.99
PTBP1-220ENST00000627714 EPHB6O15197 1021 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 NKRFO15226 690 aaKnown RBP eCLIP21.25■□□□□ 0.992e-8■□□□□ 10.2
PTBP1-220ENST00000627714 ZNF185O15231 689 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 GNA14O95837 355 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 GPATCH4Q5T3I0 446 aaKnown RBP21.25■□□□□ 0.99
PTBP1-220ENST00000627714 PDXDC1Q6P996 788 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 FAM196AQ6ZSG2 479 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 CACNA2D4Q7Z3S7 1137 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 LRRC47Q8N1G4 583 aaKnown RBP21.25■□□□□ 0.99
PTBP1-220ENST00000627714 RNF10Q8N5U6 811 aaKnown RBP21.25■□□□□ 0.99
PTBP1-220ENST00000627714 TBC1D16Q8TBP0 767 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 CEP63Q96MT8 703 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 GLT8D2Q9H1C3 349 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 COL4A3BPQ9Y5P4 624 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 CAPN6Q9Y6Q1 641 aa21.25■□□□□ 0.99
PTBP1-220ENST00000627714 C8orf37Q96NL8 207 aa21.24■□□□□ 0.99
PTBP1-220ENST00000627714 CRACR2AQ9BSW2 395 aa21.24■□□□□ 0.99
PTBP1-220ENST00000627714 JMJD4Q9H9V9 463 aa21.24■□□□□ 0.99
PTBP1-220ENST00000627714 TSKSQ9UJT2 592 aa21.24■□□□□ 0.99
PTBP1-220ENST00000627714 A0A0U1RQG5 324 aaPredicted RBP21.24■□□□□ 0.99
PTBP1-220ENST00000627714 RNF40O75150 1001 aa21.24■□□□□ 0.99
PTBP1-220ENST00000627714 MAGEA1P43355 309 aa21.24■□□□□ 0.99
PTBP1-220ENST00000627714 COASYQ13057 564 aa21.24■□□□□ 0.99
PTBP1-220ENST00000627714 ZCWPW2Q504Y3 356 aa21.24■□□□□ 0.99
PTBP1-220ENST00000627714 TMC4Q7Z404 712 aa21.24■□□□□ 0.99
PTBP1-220ENST00000627714 LUC7LQ9NQ29 371 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms