RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 IL17REQ8NFR9 667 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 UCMAQ8WVF2 138 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 MFSD1Q9H3U5 465 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 ZSWIM4Q9H7M6 989 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 ADCY9O60503 1353 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 IKBKBO14920 756 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 NSFP46459 744 aaKnown RBP12.1□□□□□ -0.47
VPS8-227ENST00000625842 MYL5Q02045 173 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 KPNA2P52292 529 aaKnown RBP12.1□□□□□ -0.47
VPS8-227ENST00000625842 SNW1Q13573 536 aaKnown RBP12.1□□□□□ -0.47
VPS8-227ENST00000625842 NBPF15Q8N660 670 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 SDR42E1Q8WUS8 393 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 ZNF560Q96MR9 790 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 TRERF1Q96PN7 1200 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 DACT1Q9NYF0 836 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 GGA3Q9NZ52 723 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 ATP7BP35670 1465 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 DDX5P17844 614 aaKnown RBP12.1□□□□□ -0.47
VPS8-227ENST00000625842 RAB44Q7Z6P3 723 aaPredicted RBP12.1□□□□□ -0.47
VPS8-227ENST00000625842 CEP57Q86XR8 500 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 CDKL2Q92772 493 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 STN1Q9H668 368 aaKnown RBP12.1□□□□□ -0.47
VPS8-227ENST00000625842 RIC8AQ9NPQ8 531 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 EIF4E1BA6NMX2 242 aaKnown RBP12.09□□□□□ -0.47
VPS8-227ENST00000625842 SART1O43290 800 aaKnown RBP12.09□□□□□ -0.47
VPS8-227ENST00000625842 EIF2AK2P19525 551 aaKnown RBP12.09□□□□□ -0.47
VPS8-227ENST00000625842 CYP2B6P20813 491 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 TFAMQ00059 246 aaKnown RBP12.09□□□□□ -0.47
VPS8-227ENST00000625842 SATB1Q01826 763 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 WASHC5Q12768 1159 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 KRT24Q2M2I5 525 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 KRT40Q6A162 431 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 GLB1LQ6UWU2 654 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 RPUSD2Q8IZ73 545 aaKnown RBP12.09□□□□□ -0.47
VPS8-227ENST00000625842 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 NLRP4Q96MN2 994 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 SRRTQ9BXP5 876 aaKnown RBP12.09□□□□□ -0.47
VPS8-227ENST00000625842 IGSF1Q8N6C5 1336 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 METP08581 1390 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 CCDC85CA6NKD9 419 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 SLC27A2O14975 620 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 ENTPD3O75355 529 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 GH1P01241 217 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 MAPK4P31152 587 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 GARSP41250 739 aaKnown RBP12.09□□□□□ -0.47
VPS8-227ENST00000625842 KLHL30Q0D2K2 578 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 CCDC6Q16204 474 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 GRK7Q8WTQ7 553 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 TEX13BQ9BXU2 312 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 CTTNBP2Q8WZ74 1663 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 PNMA6FA0A0J9YX94 578 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 PHKA1P46020 1223 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 G2E3Q7L622 706 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 NELFCDQ8IXH7 590 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 CHMP6Q96FZ7 201 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 PALD1Q9ULE6 856 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 IFNA8P32881 189 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 STX17P56962 302 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 COG7P83436 770 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 NFIXQ14938 502 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 PREPLQ4J6C6 727 aaPredicted RBP12.09□□□□□ -0.47
VPS8-227ENST00000625842 ZNF212Q9UDV6 495 aa12.09□□□□□ -0.47
VPS8-227ENST00000625842 DISP1Q96F81 1524 aa12.08□□□□□ -0.47
VPS8-227ENST00000625842 MAGEB2O15479 319 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 KCNQ4P56696 695 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 SEPT2Q15019 361 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 IRAK1BP1Q5VVH5 260 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 ZNF274Q96GC6 653 aaPredicted RBP12.08□□□□□ -0.48
VPS8-227ENST00000625842 GRPEL1Q9HAV7 217 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 ATP6V0A4Q9HBG4 840 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 LONP1P36776 959 aaKnown RBP12.08□□□□□ -0.48
VPS8-227ENST00000625842 FAM160A1Q05DH4 1040 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 IQCB1Q15051 598 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 FAM26FQ5R3K3 315 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 ZNF280CQ8ND82 737 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 TMEM169Q96HH4 297 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 SRPK1Q96SB4 655 aaKnown RBP12.08□□□□□ -0.48
VPS8-227ENST00000625842 PANK4Q9NVE7 773 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 UAP1Q16222 522 aaPredicted RBP12.08□□□□□ -0.48
VPS8-227ENST00000625842 SFMBT2Q5VUG0 894 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 SUSD4Q5VX71 490 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 SPATA33Q96N06 139 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 AKAP7Q9P0M2 348 aaPredicted RBP12.08□□□□□ -0.48
VPS8-227ENST00000625842 LCMT1Q9UIC8 334 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 ARHGAP31Q2M1Z3 1444 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 RAG1P15918 1043 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 AK2P54819 239 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 ASPHQ12797 758 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 DGKHQ86XP1 1220 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 ANKS4BQ8N8V4 417 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 BCAP29Q9UHQ4 241 aa12.08□□□□□ -0.48
VPS8-227ENST00000625842 PFASO15067 1338 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 MSCO60682 206 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 BFSP1Q12934 665 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 PPP2R5CQ13362 524 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 RSBN1LQ6PCB5 846 aaPredicted RBP12.07□□□□□ -0.48
VPS8-227ENST00000625842 KCTD1Q719H9 257 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 SCN4BQ8IWT1 228 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 SECISBP2LQ93073 1101 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms