RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 MSH4O15457 936 aa13.19□□□□□ -0.3
CCDC163-201ENST00000625766 KLRC4O43908 158 aa13.19□□□□□ -0.3
CCDC163-201ENST00000625766 SPIRE1Q08AE8 756 aa13.19□□□□□ -0.3
CCDC163-201ENST00000625766 VGLL4Q14135 290 aa13.19□□□□□ -0.3
CCDC163-201ENST00000625766 ZNF658Q5TYW1 1059 aaPredicted RBP13.19□□□□□ -0.3
CCDC163-201ENST00000625766 SV2BQ7L1I2 683 aa13.19□□□□□ -0.3
CCDC163-201ENST00000625766 NUDT12Q9BQG2 462 aa13.19□□□□□ -0.3
CCDC163-201ENST00000625766 LRRC27Q9C0I9 530 aa13.19□□□□□ -0.3
CCDC163-201ENST00000625766 NT5C3AQ9H0P0 336 aa13.19□□□□□ -0.3
CCDC163-201ENST00000625766 RAVER2Q9HCJ3 691 aaKnown RBP13.19□□□□□ -0.3
CCDC163-201ENST00000625766 IQCA1LA6NCM1 817 aa13.18□□□□□ -0.3
CCDC163-201ENST00000625766 RHOBTB3O94955 611 aa13.18□□□□□ -0.3
CCDC163-201ENST00000625766 TPM3P06753 285 aa13.18□□□□□ -0.3
CCDC163-201ENST00000625766 ZNF76P36508 570 aa13.18□□□□□ -0.3
CCDC163-201ENST00000625766 PPATQ06203 517 aa13.18□□□□□ -0.3
CCDC163-201ENST00000625766 CEP55Q53EZ4 464 aa13.18□□□□□ -0.3
CCDC163-201ENST00000625766 SNX29Q8TEQ0 813 aa13.18□□□□□ -0.3
CCDC163-201ENST00000625766 MED15Q96RN5 788 aa13.18□□□□□ -0.3
CCDC163-201ENST00000625766 PLIN2Q99541 437 aa13.18□□□□□ -0.3
CCDC163-201ENST00000625766 TRIM9Q9C026 710 aa13.18□□□□□ -0.3
CCDC163-201ENST00000625766 TAF1DQ9H5J8 278 aaPredicted RBP13.18□□□□□ -0.3
CCDC163-201ENST00000625766 CTDP1Q9Y5B0 961 aaPredicted RBP13.18□□□□□ -0.3
CCDC163-201ENST00000625766 RPTORQ8N122 1335 aa13.18□□□□□ -0.3
CCDC163-201ENST00000625766 POTECB2RU33 542 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 HOXA7P31268 230 aaPredicted RBP13.17□□□□□ -0.3
CCDC163-201ENST00000625766 NF2P35240 595 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
CCDC163-201ENST00000625766 DLK2Q6UY11 383 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 PNMA8AQ86V59 439 aaPredicted RBP13.17□□□□□ -0.3
CCDC163-201ENST00000625766 CPXCR1Q8N123 301 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 CYP2W1Q8TAV3 490 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 ATG4CQ96DT6 458 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 CDK5RAP3Q96JB5 506 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 CSADQ9Y600 493 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 PVALEFA0A1B0GWK0 134 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 GOLGA6L6A8MZA4 724 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 ESPNB1AK53 854 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 NFIBO00712 420 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 CXCL11O14625 94 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 BCRP11274 1271 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 ALAS1P13196 640 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
CCDC163-201ENST00000625766 FMR1Q06787 632 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCDC163-201ENST00000625766 PRKG1Q13976 671 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 NIPA1Q7RTP0 329 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 ZSCAN30Q86W11 494 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 ANKRD13AQ8IZ07 590 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 SYTL5Q8TDW5 730 aaPredicted RBP13.17□□□□□ -0.3
CCDC163-201ENST00000625766 LARP4BQ92615 738 aaKnown RBP13.17□□□□□ -0.3
CCDC163-201ENST00000625766 RAD54LQ92698 747 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 GJA10Q969M2 543 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 CDCA5Q96FF9 252 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 FANCLQ9NW38 375 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 KDM3AQ9Y4C1 1321 aa13.17□□□□□ -0.3
CCDC163-201ENST00000625766 ZNF18P17022 549 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 ECM1Q16610 540 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 TKFCQ3LXA3 575 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 KMT5BQ4FZB7 885 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 SPATA1Q5VX52 437 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 OTOP1Q7RTM1 612 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 ERO1BQ86YB8 467 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 GIMAP8Q8ND71 665 aaPredicted RBP13.16□□□□□ -0.3
CCDC163-201ENST00000625766 SLC5A5Q92911 643 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 PHIPQ8WWQ0 1821 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 FRMPD4Q14CM0 1322 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 UNCXA6NJT0 531 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 PTMAP06454 111 aaKnown RBP13.16□□□□□ -0.3
CCDC163-201ENST00000625766 RPA1P27694 616 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 CCT6AP40227 531 aaKnown RBP13.16□□□□□ -0.3
CCDC163-201ENST00000625766 COBLL1Q53SF7 1204 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 ERMNQ8TAM6 284 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 CCDC47Q96A33 483 aaKnown RBP13.16□□□□□ -0.3
CCDC163-201ENST00000625766 MXRA8Q9BRK3 442 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 POLR3CQ9BUI4 534 aaPredicted RBP13.16□□□□□ -0.3
CCDC163-201ENST00000625766 COL20A1Q9P218 1284 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 VAV3Q9UKW4 847 aa13.16□□□□□ -0.3
CCDC163-201ENST00000625766 ZNF214Q9UL59 606 aaPredicted RBP13.16□□□□□ -0.3
CCDC163-201ENST00000625766 PSMD10O75832 226 aa13.15□□□□□ -0.3
CCDC163-201ENST00000625766 RPS6P62753 249 aaKnown RBP13.15□□□□□ -0.3
CCDC163-201ENST00000625766 FANCCQ00597 558 aa13.15□□□□□ -0.3
CCDC163-201ENST00000625766 SETQ01105 290 aaPredicted RBP13.15□□□□□ -0.3
CCDC163-201ENST00000625766 PCNX4Q63HM2 1172 aa13.15□□□□□ -0.3
CCDC163-201ENST00000625766 HAUS3Q68CZ6 603 aa13.15□□□□□ -0.3
CCDC163-201ENST00000625766 ADSSL1Q8N142 457 aa13.15□□□□□ -0.3
CCDC163-201ENST00000625766 FAM43AQ8N2R8 423 aa13.15□□□□□ -0.3
CCDC163-201ENST00000625766 WNK4Q96J92 1243 aa13.15□□□□□ -0.3
CCDC163-201ENST00000625766 RWDD2AQ9UIY3 292 aa13.15□□□□□ -0.3
CCDC163-201ENST00000625766 NFE2L3Q9Y4A8 694 aa13.15□□□□□ -0.3
CCDC163-201ENST00000625766 MYMKA6NI61 221 aa13.14□□□□□ -0.31
CCDC163-201ENST00000625766 SPATA31C1P0DKV0 1188 aa13.14□□□□□ -0.31
CCDC163-201ENST00000625766 PPP1R2P41236 205 aa13.14□□□□□ -0.31
CCDC163-201ENST00000625766 PPP2R5CQ13362 524 aa13.14□□□□□ -0.31
CCDC163-201ENST00000625766 MCM6Q14566 821 aa13.14□□□□□ -0.31
CCDC163-201ENST00000625766 TMEM132BQ14DG7 1078 aa13.14□□□□□ -0.31
CCDC163-201ENST00000625766 XRRA1Q6P2D8 792 aa13.14□□□□□ -0.31
CCDC163-201ENST00000625766 B3GNT9Q6UX72 402 aa13.14□□□□□ -0.31
CCDC163-201ENST00000625766 KCNK18Q7Z418 384 aa13.14□□□□□ -0.31
CCDC163-201ENST00000625766 CATSPER3Q86XQ3 398 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms