RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 STAG2Q8N3U4 1231 aa23.04■■□□□ 1.28
R3HCC1-210ENST00000625275 FANCBQ8NB91 859 aa23.04■■□□□ 1.28
R3HCC1-210ENST00000625275 CTCFLQ8NI51 663 aaPredicted RBP23.04■■□□□ 1.28
R3HCC1-210ENST00000625275 SCFD2Q8WU76 684 aa23.04■■□□□ 1.28
R3HCC1-210ENST00000625275 PPP1R12CQ9BZL4 782 aa23.04■■□□□ 1.28
R3HCC1-210ENST00000625275 JMJD4Q9H9V9 463 aa23.04■■□□□ 1.28
R3HCC1-210ENST00000625275 GOLGA8AA7E2F4 631 aa23.03■■□□□ 1.28
R3HCC1-210ENST00000625275 LARGE1O95461 756 aa23.03■■□□□ 1.28
R3HCC1-210ENST00000625275 CPT1AP50416 773 aa23.03■■□□□ 1.28
R3HCC1-210ENST00000625275 METAP2P50579 478 aaKnown RBP eCLIP23.03■■□□□ 1.28
R3HCC1-210ENST00000625275 FBXO11Q86XK2 927 aa23.03■■□□□ 1.28
R3HCC1-210ENST00000625275 OR6J1Q8NGC5 347 aa23.03■■□□□ 1.28
R3HCC1-210ENST00000625275 FAM161BQ96MY7 647 aa23.03■■□□□ 1.28
R3HCC1-210ENST00000625275 GUCD1Q96NT3 240 aa23.03■■□□□ 1.28
R3HCC1-210ENST00000625275 POLR3EQ9NVU0 708 aa23.03■■□□□ 1.28
R3HCC1-210ENST00000625275 LIMCH1Q9UPQ0 1083 aa23.03■■□□□ 1.28
R3HCC1-210ENST00000625275 NKRFO15226 690 aaKnown RBP eCLIP23.02■■□□□ 1.28
R3HCC1-210ENST00000625275 KIF5BP33176 963 aa23.02■■□□□ 1.28
R3HCC1-210ENST00000625275 PSMC6P62333 389 aa23.02■■□□□ 1.28
R3HCC1-210ENST00000625275 ME3Q16798 604 aa23.02■■□□□ 1.28
R3HCC1-210ENST00000625275 MCF2L2Q86YR7 1114 aa23.02■■□□□ 1.28
R3HCC1-210ENST00000625275 TMEM199Q8N511 208 aa23.02■■□□□ 1.28
R3HCC1-210ENST00000625275 VAT1LQ9HCJ6 419 aa23.02■■□□□ 1.28
R3HCC1-210ENST00000625275 FAM217BQ9NTX9 383 aaPredicted RBP23.02■■□□□ 1.28
R3HCC1-210ENST00000625275 MRPL11Q9Y3B7 192 aaKnown RBP23.02■■□□□ 1.28
R3HCC1-210ENST00000625275 STK3Q13188 491 aa23.01■■□□□ 1.27
R3HCC1-210ENST00000625275 RTN1Q16799 776 aa23.01■■□□□ 1.27
R3HCC1-210ENST00000625275 SLC17A8Q8NDX2 589 aa23.01■■□□□ 1.27
R3HCC1-210ENST00000625275 SYTL5Q8TDW5 730 aaPredicted RBP23.01■■□□□ 1.27
R3HCC1-210ENST00000625275 TBC1D5Q92609 795 aa23.01■■□□□ 1.27
R3HCC1-210ENST00000625275 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.01■■□□□ 1.27
R3HCC1-210ENST00000625275 COL20A1Q9P218 1284 aa23.01■■□□□ 1.27
R3HCC1-210ENST00000625275 CUL9Q8IWT3 2517 aa23■■□□□ 1.27
R3HCC1-210ENST00000625275 KLRF2D3W0D1 207 aa23■■□□□ 1.27
R3HCC1-210ENST00000625275 CSF2RAP15509 400 aa23■■□□□ 1.27
R3HCC1-210ENST00000625275 CDC27P30260 824 aa23■■□□□ 1.27
R3HCC1-210ENST00000625275 CCT2P78371 535 aaKnown RBP23■■□□□ 1.27
R3HCC1-210ENST00000625275 PURAQ00577 322 aaKnown RBP23■■□□□ 1.27
R3HCC1-210ENST00000625275 BRDTQ58F21 947 aaPredicted RBP23■■□□□ 1.27
R3HCC1-210ENST00000625275 NCOA5Q9HCD5 579 aaKnown RBP23■■□□□ 1.27
R3HCC1-210ENST00000625275 B4GALT4O60513 344 aa22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 PFKFB2O60825 505 aa22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 PLEKHA8P1O95397 391 aa22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 MYL3P08590 195 aa22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 CYP2C18P33260 490 aa22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 MCM2P49736 904 aa22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 TTLL4Q14679 1199 aa22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 NSUN6Q8TEA1 469 aaKnown RBP22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 TAAR1Q96RJ0 339 aa22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 AMNQ9BXJ7 453 aa22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 SLKQ9H2G2 1235 aaPredicted RBP22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 HIPK3Q9H422 1215 aa22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 RBM28Q9NW13 759 aaKnown RBP22.99■■□□□ 1.27
R3HCC1-210ENST00000625275 TXNP10599 105 aaKnown RBP22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 SCRN1Q12765 414 aa22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 SLC35G1Q2M3R5 365 aa22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 TMEM240Q5SV17 173 aa22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 PSRC1Q6PGN9 363 aaPredicted RBP22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 C16orf59Q7L2K0 433 aa22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 CMTR1Q8N1G2 835 aaKnown RBP22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 NECAB1Q8N987 351 aa22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 COPS5Q92905 334 aa22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 MTMR8Q96EF0 704 aa22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 MTG1Q9BT17 334 aaPredicted RBP22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 TRPV6Q9H1D0 765 aa22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 ADD1P35611 737 aaKnown RBP22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 TMTC3Q6ZXV5 915 aa22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 RMDN3Q96TC7 470 aa22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 NOC4LQ9BVI4 516 aaKnown RBP22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 SEMA6BQ9H3T3 888 aa22.98■■□□□ 1.27
R3HCC1-210ENST00000625275 UMODL1Q5DID0 1318 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 DOCK5Q9H7D0 1870 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 TMEM265A0A087WTH1 108 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 CCDC196A0A1B0GTZ2 297 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 A6NJR5 290 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 ZBTB5O15062 677 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 CYTH3O43739 400 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 ARIH2O95376 493 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 GNAQP50148 359 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 ST3GAL1Q11201 340 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 SRBD1Q8N5C6 995 aaKnown RBP22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 GTF3C6Q969F1 213 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 SNX21Q969T3 373 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 ZSCAN31Q96LW9 406 aaPredicted RBP22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 IWS1Q96ST2 819 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 TTYH1Q9H313 450 aaPredicted RBP22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 IL23AQ9NPF7 189 aa22.97■■□□□ 1.27
R3HCC1-210ENST00000625275 OPLAHO14841 1288 aa22.96■■□□□ 1.27
R3HCC1-210ENST00000625275 KPNA6O60684 536 aa22.96■■□□□ 1.27
R3HCC1-210ENST00000625275 PPP1R11O60927 126 aaPredicted RBP22.96■■□□□ 1.27
R3HCC1-210ENST00000625275 CFBP00751 764 aa22.96■■□□□ 1.27
R3HCC1-210ENST00000625275 ACRP10323 421 aa22.96■■□□□ 1.27
R3HCC1-210ENST00000625275 GHRHRQ02643 423 aa22.96■■□□□ 1.27
R3HCC1-210ENST00000625275 CCDC62Q6P9F0 684 aa22.96■■□□□ 1.27
R3HCC1-210ENST00000625275 TMX3Q96JJ7 454 aa22.96■■□□□ 1.27
R3HCC1-210ENST00000625275 LZTS2Q9BRK4 669 aa22.96■■□□□ 1.27
R3HCC1-210ENST00000625275 SH2B1Q9NRF2 756 aaPredicted RBP22.96■■□□□ 1.27
R3HCC1-210ENST00000625275 HSD17B4P51659 736 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms