RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 PRDM12Q9H4Q4 367 aa18.08■□□□□ 0.48
ATRX-217ENST00000624668 DDX41Q9UJV9 622 aaKnown RBP18.08■□□□□ 0.48
ATRX-217ENST00000624668 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.48
ATRX-217ENST00000624668 IFIT3O14879 490 aaKnown RBP18.07■□□□□ 0.48
ATRX-217ENST00000624668 GH1P01241 217 aa18.07■□□□□ 0.48
ATRX-217ENST00000624668 HOXA13P31271 388 aaPredicted RBP18.07■□□□□ 0.48
ATRX-217ENST00000624668 TROAPQ12815 778 aa18.07■□□□□ 0.48
ATRX-217ENST00000624668 COL9A3Q14050 684 aaPredicted RBP18.07■□□□□ 0.48
ATRX-217ENST00000624668 ADGRE1Q14246 886 aa18.07■□□□□ 0.48
ATRX-217ENST00000624668 DEFB128Q7Z7B8 93 aa18.07■□□□□ 0.48
ATRX-217ENST00000624668 IL31RAQ8NI17 732 aa18.07■□□□□ 0.48
ATRX-217ENST00000624668 RUFY2Q8WXA3 655 aa18.07■□□□□ 0.48
ATRX-217ENST00000624668 PIGSQ96S52 555 aa18.07■□□□□ 0.48
ATRX-217ENST00000624668 RIOX1Q9H6W3 641 aa18.07■□□□□ 0.48
ATRX-217ENST00000624668 PCDHA1Q9Y5I3 950 aa18.07■□□□□ 0.48
ATRX-217ENST00000624668 TANC1Q9C0D5 1861 aa18.07■□□□□ 0.48
ATRX-217ENST00000624668 EIF3JO75822 258 aaKnown RBP18.06■□□□□ 0.48
ATRX-217ENST00000624668 MYOGP15173 224 aa18.06■□□□□ 0.48
ATRX-217ENST00000624668 CHMP4BP1P59074 171 aa18.06■□□□□ 0.48
ATRX-217ENST00000624668 TRDNQ13061 729 aa18.06■□□□□ 0.48
ATRX-217ENST00000624668 RAB30Q15771 203 aa18.06■□□□□ 0.48
ATRX-217ENST00000624668 HOMER1Q86YM7 354 aa18.06■□□□□ 0.48
ATRX-217ENST00000624668 RPUSD2Q8IZ73 545 aaKnown RBP18.06■□□□□ 0.48
ATRX-217ENST00000624668 PDCD2LQ9BRP1 358 aa18.06■□□□□ 0.48
ATRX-217ENST00000624668 MTIF3Q9H2K0 278 aaKnown RBP18.06■□□□□ 0.48
ATRX-217ENST00000624668 PITPNM1O00562 1244 aa18.05■□□□□ 0.48
ATRX-217ENST00000624668 PTPN11Q06124 597 aaPredicted RBP18.05■□□□□ 0.48
ATRX-217ENST00000624668 GDF6Q6KF10 455 aaPredicted RBP18.05■□□□□ 0.48
ATRX-217ENST00000624668 MB21D2Q8IYB1 491 aaPredicted RBP18.05■□□□□ 0.48
ATRX-217ENST00000624668 IGDCC4Q8TDY8 1250 aa18.05■□□□□ 0.48
ATRX-217ENST00000624668 DHX38Q92620 1227 aaKnown RBP18.05■□□□□ 0.48
ATRX-217ENST00000624668 MAP4K1Q92918 833 aa18.05■□□□□ 0.48
ATRX-217ENST00000624668 EMID1Q96A84 441 aaPredicted RBP18.05■□□□□ 0.48
ATRX-217ENST00000624668 ZFP91Q96JP5 570 aaPredicted RBP18.05■□□□□ 0.48
ATRX-217ENST00000624668 PRDM6Q9NQX0 595 aa18.05■□□□□ 0.48
ATRX-217ENST00000624668 MSRAQ9UJ68 235 aa18.05■□□□□ 0.48
ATRX-217ENST00000624668 SLC4A7Q9Y6M7 1214 aa18.05■□□□□ 0.48
ATRX-217ENST00000624668 BAZ2BQ9UIF8 2168 aaKnown RBP18.05■□□□□ 0.48
ATRX-217ENST00000624668 TTC28Q96AY4 2481 aa18.05■□□□□ 0.48
ATRX-217ENST00000624668 ZBBXA8MT70 800 aa18.04■□□□□ 0.48
ATRX-217ENST00000624668 IQCF3P0C7M6 154 aa18.04■□□□□ 0.48
ATRX-217ENST00000624668 SP2Q02086 613 aa18.04■□□□□ 0.48
ATRX-217ENST00000624668 GPNMBQ14956 572 aa18.04■□□□□ 0.48
ATRX-217ENST00000624668 WTAPQ15007 396 aa18.04■□□□□ 0.48
ATRX-217ENST00000624668 PGM5Q15124 567 aa18.04■□□□□ 0.48
ATRX-217ENST00000624668 PTGISQ16647 500 aa18.04■□□□□ 0.48
ATRX-217ENST00000624668 RALYLQ86SE5 291 aaKnown RBP18.04■□□□□ 0.48
ATRX-217ENST00000624668 VSIG10LQ86VR7 867 aa18.04■□□□□ 0.48
ATRX-217ENST00000624668 NCOA7Q8NI08 942 aa18.04■□□□□ 0.48
ATRX-217ENST00000624668 GPKOWQ92917 476 aaPredicted RBP eCLIP18.04■□□□□ 0.48
ATRX-217ENST00000624668 RBM8AQ9Y5S9 174 aaKnown RBP18.04■□□□□ 0.48
ATRX-217ENST00000624668 MRVI1Q9Y6F6 885 aa18.04■□□□□ 0.48
ATRX-217ENST00000624668 TET1Q8NFU7 2136 aa18.04■□□□□ 0.48
ATRX-217ENST00000624668 SORBS3O60504 671 aa18.03■□□□□ 0.48
ATRX-217ENST00000624668 PFKMP08237 780 aa18.03■□□□□ 0.48
ATRX-217ENST00000624668 ZNF286BP0CG31 522 aa18.03■□□□□ 0.48
ATRX-217ENST00000624668 MYCLP12524 364 aaPredicted RBP18.03■□□□□ 0.48
ATRX-217ENST00000624668 ATP2A2P16615 1042 aaKnown RBP18.03■□□□□ 0.48
ATRX-217ENST00000624668 TMEM67Q5HYA8 995 aa18.03■□□□□ 0.48
ATRX-217ENST00000624668 SESTD1Q86VW0 696 aa18.03■□□□□ 0.48
ATRX-217ENST00000624668 BCAS3Q9H6U6 928 aa18.03■□□□□ 0.48
ATRX-217ENST00000624668 MAP3K20Q9NYL2 800 aaKnown RBP18.03■□□□□ 0.48
ATRX-217ENST00000624668 HAS3O00219 553 aa18.02■□□□□ 0.48
ATRX-217ENST00000624668 F2P00734 622 aa18.02■□□□□ 0.48
ATRX-217ENST00000624668 HOXD8P13378 290 aaPredicted RBP18.02■□□□□ 0.48
ATRX-217ENST00000624668 CASTP20810 708 aaKnown RBP18.02■□□□□ 0.48
ATRX-217ENST00000624668 DGKDQ16760 1214 aa18.02■□□□□ 0.48
ATRX-217ENST00000624668 PPTC7Q8NI37 304 aa18.02■□□□□ 0.48
ATRX-217ENST00000624668 MYL10Q9BUA6 226 aa18.02■□□□□ 0.48
ATRX-217ENST00000624668 SLC28A3Q9HAS3 691 aa18.02■□□□□ 0.48
ATRX-217ENST00000624668 LY9Q9HBG7 655 aa18.02■□□□□ 0.48
ATRX-217ENST00000624668 HDAC6Q9UBN7 1215 aa18.02■□□□□ 0.48
ATRX-217ENST00000624668 GTF2IRD1Q9UHL9 959 aa18.02■□□□□ 0.48
ATRX-217ENST00000624668 NOD1Q9Y239 953 aa18.02■□□□□ 0.48
ATRX-217ENST00000624668 PCDHA11Q9Y5I1 949 aa18.02■□□□□ 0.48
ATRX-217ENST00000624668 MYO9BQ13459 2157 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 PNMA6FA0A0J9YX94 578 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 ERICH2A1L162 156 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 GCOM1H8Y6P7 765 aaPredicted RBP18.01■□□□□ 0.47
ATRX-217ENST00000624668 ARHGEF15O94989 841 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 POLR2MP0CAP2 368 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 UBA1P22314 1058 aaKnown RBP18.01■□□□□ 0.47
ATRX-217ENST00000624668 RFC2P35250 354 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 PSEN2P49810 448 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 BFSP2Q13515 415 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 LAMC2Q13753 1193 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 HIC1Q14526 733 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 HSDL1Q3SXM5 330 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 MYSM1Q5VVJ2 828 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 SKAP1Q86WV1 359 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 DHX37Q8IY37 1157 aaKnown RBP18.01■□□□□ 0.47
ATRX-217ENST00000624668 PIBF1Q8WXW3 757 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 WNT8BQ93098 351 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 ALG1Q9BT22 464 aa18.01■□□□□ 0.47
ATRX-217ENST00000624668 LSG1Q9H089 658 aaKnown RBP18.01■□□□□ 0.47
ATRX-217ENST00000624668 MYH7BA7E2Y1 1941 aa18■□□□□ 0.47
ATRX-217ENST00000624668 TCTN1Q2MV58 587 aa18■□□□□ 0.47
ATRX-217ENST00000624668 CELF3Q5SZQ8 465 aaKnown RBP18■□□□□ 0.47
ATRX-217ENST00000624668 FCHSD1Q86WN1 690 aa18■□□□□ 0.47
ATRX-217ENST00000624668 SAMD3Q8N6K7 520 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms