RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 RBM28Q9NW13 759 aaKnown RBP17.4■□□□□ 0.38
RPL13A-214ENST00000624069 RIPK3Q9Y572 518 aa17.4■□□□□ 0.38
RPL13A-214ENST00000624069 PCDHA11Q9Y5I1 949 aa17.4■□□□□ 0.38
RPL13A-214ENST00000624069 MTCH2Q9Y6C9 303 aa17.4■□□□□ 0.38
RPL13A-214ENST00000624069 UMODL1Q5DID0 1318 aa17.4■□□□□ 0.38
RPL13A-214ENST00000624069 MYH6P13533 1939 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 DNAJC25-GNG10A0A024R161 153 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 RFXAPO00287 272 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 CTAGE5O15320 804 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 METAP2P50579 478 aaKnown RBP eCLIP17.39■□□□□ 0.377e-17■■□□□ 12.3
RPL13A-214ENST00000624069 ACVR2BQ13705 512 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 TOB2Q14106 344 aaPredicted RBP17.39■□□□□ 0.37
RPL13A-214ENST00000624069 QRICH1Q2TAL8 776 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 GNASQ5JWF2 1037 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 HOMER1Q86YM7 354 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 FANCBQ8NB91 859 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 SLC43A3Q8NBI5 491 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 SPZ1Q9BXG8 430 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 SPC25Q9HBM1 224 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 MUC6Q6W4X9 2439 aa17.39■□□□□ 0.37
RPL13A-214ENST00000624069 BAZ2BQ9UIF8 2168 aaKnown RBP17.38■□□□□ 0.37
RPL13A-214ENST00000624069 PLEKHA8P1O95397 391 aa17.38■□□□□ 0.37
RPL13A-214ENST00000624069 NKX3-2P78367 333 aa17.38■□□□□ 0.37
RPL13A-214ENST00000624069 USH1GQ495M9 461 aa17.38■□□□□ 0.37
RPL13A-214ENST00000624069 TMTC3Q6ZXV5 915 aa17.38■□□□□ 0.37
RPL13A-214ENST00000624069 VWCEQ96DN2 955 aa17.38■□□□□ 0.37
RPL13A-214ENST00000624069 DDX11Q96FC9 970 aa17.38■□□□□ 0.37
RPL13A-214ENST00000624069 TRERF1Q96PN7 1200 aa17.38■□□□□ 0.37
RPL13A-214ENST00000624069 HIPK3Q9H422 1215 aa17.38■□□□□ 0.37
RPL13A-214ENST00000624069 RIOX1Q9H6W3 641 aa17.38■□□□□ 0.37
RPL13A-214ENST00000624069 COG5Q9UP83 839 aa17.38■□□□□ 0.37
RPL13A-214ENST00000624069 SLC4A7Q9Y6M7 1214 aa17.38■□□□□ 0.37
RPL13A-214ENST00000624069 NID2Q14112 1375 aa17.38■□□□□ 0.37
RPL13A-214ENST00000624069 ZNFX1Q9P2E3 1918 aaKnown RBP17.37■□□□□ 0.37
RPL13A-214ENST00000624069 ZBTB5O15062 677 aa17.37■□□□□ 0.37
RPL13A-214ENST00000624069 RBM25P49756 843 aaKnown RBP17.37■□□□□ 0.37
RPL13A-214ENST00000624069 CCL23P55773 120 aa17.37■□□□□ 0.37
RPL13A-214ENST00000624069 ANKRD1Q15327 319 aa17.37■□□□□ 0.37
RPL13A-214ENST00000624069 SLC35G1Q2M3R5 365 aa17.37■□□□□ 0.37
RPL13A-214ENST00000624069 CCDC144BQ3MJ40 725 aa17.37■□□□□ 0.37
RPL13A-214ENST00000624069 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.37■□□□□ 0.375e-18■□□□□ 8.3
RPL13A-214ENST00000624069 ZNF467Q7Z7K2 595 aaPredicted RBP17.37■□□□□ 0.37
RPL13A-214ENST00000624069 FBXO11Q86XK2 927 aa17.37■□□□□ 0.37
RPL13A-214ENST00000624069 MTMR8Q96EF0 704 aa17.37■□□□□ 0.37
RPL13A-214ENST00000624069 RRP36Q96EU6 259 aaKnown RBP17.37■□□□□ 0.37
RPL13A-214ENST00000624069 PIGSQ96S52 555 aa17.37■□□□□ 0.37
RPL13A-214ENST00000624069 BACH2Q9BYV9 841 aa17.37■□□□□ 0.37
RPL13A-214ENST00000624069 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.37■□□□□ 0.37
RPL13A-214ENST00000624069 SEC63Q9UGP8 760 aaKnown RBP17.37■□□□□ 0.37
RPL13A-214ENST00000624069 PRRC2BQ5JSZ5 2229 aaKnown RBP17.37■□□□□ 0.37
RPL13A-214ENST00000624069 CCDC196A0A1B0GTZ2 297 aa17.36■□□□□ 0.37
RPL13A-214ENST00000624069 CYTH3O43739 400 aa17.36■□□□□ 0.37
RPL13A-214ENST00000624069 SMARCA1P28370 1054 aa17.36■□□□□ 0.37
RPL13A-214ENST00000624069 NEK4P51957 841 aa17.36■□□□□ 0.37
RPL13A-214ENST00000624069 TRAF1Q13077 416 aa17.36■□□□□ 0.37
RPL13A-214ENST00000624069 PPP2R5BQ15173 497 aa17.36■□□□□ 0.37
RPL13A-214ENST00000624069 ANKRD35Q8N283 1001 aa17.36■□□□□ 0.37
RPL13A-214ENST00000624069 SRBD1Q8N5C6 995 aaKnown RBP17.36■□□□□ 0.37
RPL13A-214ENST00000624069 PIBF1Q8WXW3 757 aa17.36■□□□□ 0.37
RPL13A-214ENST00000624069 NOC4LQ9BVI4 516 aaKnown RBP17.36■□□□□ 0.37
RPL13A-214ENST00000624069 AMNQ9BXJ7 453 aa17.36■□□□□ 0.37
RPL13A-214ENST00000624069 ABHD16BQ9H3Z7 469 aa17.36■□□□□ 0.37
RPL13A-214ENST00000624069 ABCB11O95342 1321 aa17.36■□□□□ 0.37
RPL13A-214ENST00000624069 FAM86C2PA6NEL3 165 aa17.35■□□□□ 0.37
RPL13A-214ENST00000624069 PI4K2BG5E9Z4 385 aa17.35■□□□□ 0.37
RPL13A-214ENST00000624069 GTPBP6O43824 516 aaPredicted RBP17.35■□□□□ 0.37
RPL13A-214ENST00000624069 ATP2A2P16615 1042 aaKnown RBP17.35■□□□□ 0.37
RPL13A-214ENST00000624069 EVCP57679 992 aa17.35■□□□□ 0.37
RPL13A-214ENST00000624069 MUM1L1Q5H9M0 696 aa17.35■□□□□ 0.37
RPL13A-214ENST00000624069 NSMFQ6X4W1 530 aa17.35■□□□□ 0.37
RPL13A-214ENST00000624069 RPUSD2Q8IZ73 545 aaKnown RBP17.35■□□□□ 0.37
RPL13A-214ENST00000624069 CMTR1Q8N1G2 835 aaKnown RBP17.35■□□□□ 0.37
RPL13A-214ENST00000624069 FGD4Q96M96 766 aa17.35■□□□□ 0.37
RPL13A-214ENST00000624069 WNT8AQ9H1J5 351 aa17.35■□□□□ 0.37
RPL13A-214ENST00000624069 ALDH8A1Q9H2A2 487 aaPredicted RBP17.35■□□□□ 0.37
RPL13A-214ENST00000624069 CNTNAP5Q8WYK1 1306 aa17.35■□□□□ 0.37
RPL13A-214ENST00000624069 PNMA6FA0A0J9YX94 578 aa17.34■□□□□ 0.37
RPL13A-214ENST00000624069 EPOPA6NHQ4 379 aa17.34■□□□□ 0.37
RPL13A-214ENST00000624069 NFIBO00712 420 aa17.34■□□□□ 0.37
RPL13A-214ENST00000624069 GRIN2DO15399 1336 aa17.34■□□□□ 0.37
RPL13A-214ENST00000624069 PDIA3P30101 505 aaKnown RBP17.34■□□□□ 0.37
RPL13A-214ENST00000624069 AK2P54819 239 aa17.34■□□□□ 0.37
RPL13A-214ENST00000624069 BEX3Q00994 111 aa17.34■□□□□ 0.37
RPL13A-214ENST00000624069 KRT40Q6A162 431 aa17.34■□□□□ 0.37
RPL13A-214ENST00000624069 CXCL17Q6UXB2 119 aa17.34■□□□□ 0.37
RPL13A-214ENST00000624069 CCDC82Q8N4S0 544 aa17.34■□□□□ 0.37
RPL13A-214ENST00000624069 TBC1D32Q96NH3 1257 aa17.34■□□□□ 0.37
RPL13A-214ENST00000624069 KATNBL1Q9H079 304 aa17.34■□□□□ 0.37
RPL13A-214ENST00000624069 A1CFQ9NQ94 594 aaKnown RBP17.34■□□□□ 0.37
RPL13A-214ENST00000624069 MRPL11Q9Y3B7 192 aaKnown RBP17.34■□□□□ 0.37
RPL13A-214ENST00000624069 ZBBXA8MT70 800 aa17.33■□□□□ 0.36
RPL13A-214ENST00000624069 CA3P07451 260 aa17.33■□□□□ 0.36
RPL13A-214ENST00000624069 CDC27P30260 824 aa17.33■□□□□ 0.36
RPL13A-214ENST00000624069 NOL8Q76FK4 1167 aaKnown RBP17.33■□□□□ 0.36
RPL13A-214ENST00000624069 HLA-CQ95604 372 aa17.33■□□□□ 0.36
RPL13A-214ENST00000624069 ZNF274Q96GC6 653 aaPredicted RBP17.33■□□□□ 0.36
RPL13A-214ENST00000624069 LARP6Q9BRS8 491 aaKnown RBP17.33■□□□□ 0.36
RPL13A-214ENST00000624069 TRPV6Q9H1D0 765 aa17.33■□□□□ 0.36
RPL13A-214ENST00000624069 CERS4Q9HA82 394 aa17.33■□□□□ 0.36
RPL13A-214ENST00000624069 CD320Q9NPF0 282 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms