RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 PIBF1Q8WXW3 757 aa18.5■□□□□ 0.55
DDB2-216ENST00000622878 EMID1Q96A84 441 aaPredicted RBP18.5■□□□□ 0.55
DDB2-216ENST00000622878 NEK1Q96PY6 1258 aa18.5■□□□□ 0.55
DDB2-216ENST00000622878 NOC4LQ9BVI4 516 aaKnown RBP18.5■□□□□ 0.55
DDB2-216ENST00000622878 PPP1R12CQ9BZL4 782 aa18.5■□□□□ 0.55
DDB2-216ENST00000622878 MTMR10Q9NXD2 777 aa18.5■□□□□ 0.55
DDB2-216ENST00000622878 UMODL1Q5DID0 1318 aa18.49■□□□□ 0.55
DDB2-216ENST00000622878 MMP3P08254 477 aa18.49■□□□□ 0.55
DDB2-216ENST00000622878 CALM1P0DP23 149 aa18.49■□□□□ 0.55
DDB2-216ENST00000622878 CALM2P0DP24 149 aa18.49■□□□□ 0.55
DDB2-216ENST00000622878 CALM3P0DP25 149 aa18.49■□□□□ 0.55
DDB2-216ENST00000622878 CSF2RAP15509 400 aa18.49■□□□□ 0.55
DDB2-216ENST00000622878 CYP2C18P33260 490 aa18.49■□□□□ 0.55
DDB2-216ENST00000622878 PPIGQ13427 754 aaKnown RBP eCLIP18.49■□□□□ 0.555e-9■■□□□ 12.8
DDB2-216ENST00000622878 NBPF20Q3BBV1 942 aa18.49■□□□□ 0.55
DDB2-216ENST00000622878 ADCK5Q3MIX3 580 aa18.49■□□□□ 0.55
DDB2-216ENST00000622878 CMTR1Q8N1G2 835 aaKnown RBP18.49■□□□□ 0.55
DDB2-216ENST00000622878 KCNB2Q92953 911 aa18.49■□□□□ 0.55
DDB2-216ENST00000622878 RRP36Q96EU6 259 aaKnown RBP18.49■□□□□ 0.55
DDB2-216ENST00000622878 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.49■□□□□ 0.559e-21■■■■■ 29.1
DDB2-216ENST00000622878 HIPK3Q9H422 1215 aa18.49■□□□□ 0.55
DDB2-216ENST00000622878 TRMT13Q9NUP7 481 aaKnown RBP18.49■□□□□ 0.55
DDB2-216ENST00000622878 SLC12A7Q9Y666 1083 aa18.49■□□□□ 0.55
DDB2-216ENST00000622878 MYCLP12524 364 aaPredicted RBP18.48■□□□□ 0.55
DDB2-216ENST00000622878 SMAD3P84022 425 aaKnown RBP18.48■□□□□ 0.55
DDB2-216ENST00000622878 TMEM240Q5SV17 173 aa18.48■□□□□ 0.55
DDB2-216ENST00000622878 RASIP1Q5U651 963 aa18.48■□□□□ 0.55
DDB2-216ENST00000622878 NFRKBQ6P4R8 1299 aa18.48■□□□□ 0.55
DDB2-216ENST00000622878 DHX32Q7L7V1 743 aaKnown RBP18.48■□□□□ 0.55
DDB2-216ENST00000622878 FCHSD1Q86WN1 690 aa18.48■□□□□ 0.55
DDB2-216ENST00000622878 RAB11FIP4Q86YS3 637 aa18.48■□□□□ 0.55
DDB2-216ENST00000622878 TMEM199Q8N511 208 aa18.48■□□□□ 0.55
DDB2-216ENST00000622878 FANCBQ8NB91 859 aa18.48■□□□□ 0.55
DDB2-216ENST00000622878 RNPC3Q96LT9 517 aaKnown RBP18.48■□□□□ 0.55
DDB2-216ENST00000622878 WNT8AQ9H1J5 351 aa18.48■□□□□ 0.55
DDB2-216ENST00000622878 MRVI1Q9Y6F6 885 aa18.48■□□□□ 0.55
DDB2-216ENST00000622878 UNC80Q8N2C7 3258 aa18.47■□□□□ 0.55
DDB2-216ENST00000622878 PIK3CDO00329 1044 aa18.47■□□□□ 0.55
DDB2-216ENST00000622878 MEIS2O14770 477 aa18.47■□□□□ 0.55
DDB2-216ENST00000622878 MRPS9P82933 396 aaKnown RBP18.47■□□□□ 0.55
DDB2-216ENST00000622878 SP2Q02086 613 aa18.47■□□□□ 0.55
DDB2-216ENST00000622878 PTPN11Q06124 597 aaPredicted RBP18.47■□□□□ 0.55
DDB2-216ENST00000622878 TMTC3Q6ZXV5 915 aa18.47■□□□□ 0.55
DDB2-216ENST00000622878 PPP1R13LQ8WUF5 828 aa18.47■□□□□ 0.55
DDB2-216ENST00000622878 KAT2BQ92831 832 aa18.47■□□□□ 0.55
DDB2-216ENST00000622878 VWCEQ96DN2 955 aa18.47■□□□□ 0.55
DDB2-216ENST00000622878 SUPT20HL2P0C7V6 817 aa18.46■□□□□ 0.55
DDB2-216ENST00000622878 HOXD8P13378 290 aaPredicted RBP18.46■□□□□ 0.55
DDB2-216ENST00000622878 CCND2P30279 289 aa18.46■□□□□ 0.55
DDB2-216ENST00000622878 LAMC2Q13753 1193 aa18.46■□□□□ 0.55
DDB2-216ENST00000622878 MYSM1Q5VVJ2 828 aa18.46■□□□□ 0.55
DDB2-216ENST00000622878 KCNV1Q6PIU1 500 aa18.46■□□□□ 0.55
DDB2-216ENST00000622878 APOA5Q6Q788 366 aa18.46■□□□□ 0.55
DDB2-216ENST00000622878 TCEANC2Q96MN5 208 aa18.46■□□□□ 0.55
DDB2-216ENST00000622878 IL23AQ9NPF7 189 aa18.46■□□□□ 0.55
DDB2-216ENST00000622878 SEC63Q9UGP8 760 aaKnown RBP18.46■□□□□ 0.55
DDB2-216ENST00000622878 BRPF3Q9ULD4 1205 aa18.46■□□□□ 0.55
DDB2-216ENST00000622878 ACRP10323 421 aa18.45■□□□□ 0.54
DDB2-216ENST00000622878 TGFB3P10600 412 aa18.45■□□□□ 0.54
DDB2-216ENST00000622878 CYP2C9P11712 490 aa18.45■□□□□ 0.54
DDB2-216ENST00000622878 FUT2Q10981 343 aa18.45■□□□□ 0.54
DDB2-216ENST00000622878 KRT32Q14532 448 aa18.45■□□□□ 0.54
DDB2-216ENST00000622878 USP17L6PQ6QN14 398 aa18.45■□□□□ 0.54
DDB2-216ENST00000622878 ZNF365Q70YC5 407 aa18.45■□□□□ 0.54
DDB2-216ENST00000622878 SESTD1Q86VW0 696 aa18.45■□□□□ 0.54
DDB2-216ENST00000622878 MICU3Q86XE3 530 aa18.45■□□□□ 0.54
DDB2-216ENST00000622878 PPTC7Q8NI37 304 aa18.45■□□□□ 0.54
DDB2-216ENST00000622878 GPKOWQ92917 476 aaPredicted RBP eCLIP18.45■□□□□ 0.54
DDB2-216ENST00000622878 ZFP91Q96JP5 570 aaPredicted RBP18.45■□□□□ 0.54
DDB2-216ENST00000622878 CTAGE1Q96RT6 745 aa18.45■□□□□ 0.54
DDB2-216ENST00000622878 PRUNE2Q8WUY3 3088 aa18.44■□□□□ 0.54
DDB2-216ENST00000622878 CHD7Q9P2D1 2997 aa18.44■□□□□ 0.54
DDB2-216ENST00000622878 CASTP20810 708 aaKnown RBP18.44■□□□□ 0.54
DDB2-216ENST00000622878 UBA1P22314 1058 aaKnown RBP18.44■□□□□ 0.54
DDB2-216ENST00000622878 HSPA4P34932 840 aa18.44■□□□□ 0.54
DDB2-216ENST00000622878 CCL23P55773 120 aa18.44■□□□□ 0.54
DDB2-216ENST00000622878 DGKDQ16760 1214 aa18.44■□□□□ 0.54
DDB2-216ENST00000622878 CELF3Q5SZQ8 465 aaKnown RBP18.44■□□□□ 0.54
DDB2-216ENST00000622878 PSRC1Q6PGN9 363 aaPredicted RBP18.44■□□□□ 0.54
DDB2-216ENST00000622878 DHX37Q8IY37 1157 aaKnown RBP18.44■□□□□ 0.54
DDB2-216ENST00000622878 GUCD1Q96NT3 240 aa18.44■□□□□ 0.54
DDB2-216ENST00000622878 INPP4AQ96PE3 977 aaPredicted RBP18.44■□□□□ 0.54
DDB2-216ENST00000622878 hCG_1642624A0A1W2PR95 340 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 HAS3O00219 553 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 STAM2O75886 525 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 F2P00734 622 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 ICAM3P32942 547 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 SEMA3FQ13275 785 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 HSDL1Q3SXM5 330 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 FAM47CQ5HY64 1035 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 CCDC82Q8N4S0 544 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 HERVK_113Q902F9 699 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 TTYH1Q9H313 450 aaPredicted RBP18.43■□□□□ 0.54
DDB2-216ENST00000622878 BCAS3Q9H6U6 928 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 FAM217BQ9NTX9 383 aaPredicted RBP18.43■□□□□ 0.54
DDB2-216ENST00000622878 STXBP5LQ9Y2K9 1186 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 SNX14Q9Y5W7 946 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 SCN5AQ14524 2016 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 CNTNAP5Q8WYK1 1306 aa18.43■□□□□ 0.54
DDB2-216ENST00000622878 TANC1Q9C0D5 1861 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms