RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	MKRN4P	Q13434	485 aa	Predicted RBP	12.23	□□□□□ -0.45
RRP12-215	ENST00000622320	PWP2	Q15269	919 aa	Known RBP	12.23	□□□□□ -0.45
RRP12-215	ENST00000622320	TMEM192	Q8IY95	271 aa		12.23	□□□□□ -0.45
RRP12-215	ENST00000622320	MKL1	Q969V6	931 aa		12.23	□□□□□ -0.45
RRP12-215	ENST00000622320	YME1L1	Q96TA2	773 aa		12.23	□□□□□ -0.45
RRP12-215	ENST00000622320	IL1RAPL2	Q9NP60	686 aa		12.23	□□□□□ -0.45
RRP12-215	ENST00000622320	TLR9	Q9NR96	1032 aa		12.23	□□□□□ -0.45
RRP12-215	ENST00000622320	CD207	Q9UJ71	328 aa		12.23	□□□□□ -0.45
RRP12-215	ENST00000622320	CCPG1	Q9ULG6	757 aa		12.23	□□□□□ -0.45
RRP12-215	ENST00000622320	FAM186A	A6NE01	2351 aa		12.23	□□□□□ -0.45
RRP12-215	ENST00000622320	PTPRZ1	P23471	2315 aa	Predicted RBP	12.23	□□□□□ -0.45
RRP12-215	ENST00000622320	MYO7A	Q13402	2215 aa		12.23	□□□□□ -0.45
RRP12-215	ENST00000622320	DCHS1	Q96JQ0	3298 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	LGR5	O75473	907 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	TTLL1	O95922	423 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	CHGB	P05060	677 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	SNAP25	P60880	206 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	SIGLEC14	Q08ET2	396 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	MBTPS1	Q14703	1052 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	TRAF7	Q6Q0C0	670 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	SCFD2	Q8WU76	684 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	CHURC1	Q8WUH1	139 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	PAG1	Q9NWQ8	432 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	MTMR4	Q9NYA4	1195 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	GTF2IRD1	Q9UHL9	959 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	CACNA1B	Q00975	2339 aa		12.22	□□□□□ -0.45
RRP12-215	ENST00000622320	MYO15A	Q9UKN7	3530 aa		12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	KDM4A	O75164	1064 aa		12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	AVPR2	P30518	371 aa		12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	CTNNB1	P35222	781 aa		12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	PDE4D	Q08499	809 aa		12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	BAAT	Q14032	418 aa	Predicted RBP	12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	TRIM71	Q2Q1W2	868 aa	Known RBP	12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	ZNF618	Q5T7W0	954 aa		12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	SLC30A10	Q6XR72	485 aa		12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	STAG1	Q8WVM7	1258 aa		12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	WNT8B	Q93098	351 aa		12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	CHMP4C	Q96CF2	233 aa		12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	ASIC4	Q96FT7	647 aa		12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	GMCL1	Q96IK5	515 aa		12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.21	□□□□□ -0.45
RRP12-215	ENST00000622320	EMSY	Q7Z589	1322 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	LOC730098	B7Z3J9	87 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	NFIB	O00712	420 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	LINC01565	O15544	149 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	PRDM1	O75626	825 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	RGS20	O76081	388 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	MMP3	P08254	477 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	TXN	P10599	105 aa	Known RBP	12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	GTF2F1	P35269	517 aa	Known RBP eCLIP	12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	SLC1A4	P43007	532 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	NDUFV1	P49821	464 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	PDE4B	Q07343	736 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	PTK7	Q13308	1070 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	SBK1	Q52WX2	424 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	CLASRP	Q8N2M8	674 aa	Known RBP	12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	DBF4B	Q8NFT6	615 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	KAT2B	Q92831	832 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	LMAN2L	Q9H0V9	348 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	PRR12	Q9ULL5	1215 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	TRPC6	Q9Y210	931 aa		12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	RIF1	Q5UIP0	2472 aa	Known RBP	12.2	□□□□□ -0.46
RRP12-215	ENST00000622320	GVINP1	Q7Z2Y8	2422 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	PTPDC1	A2A3K4	754 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	MINDY4B	A8MYZ0	360 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	GALR2	O43603	387 aa	Predicted RBP	12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	PLA2G6	O60733	806 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	CSPG5	O95196	566 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	ARIH2	O95376	493 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	ICAM1	P05362	532 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	EDNRB	P24530	442 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	NBL1	P41271	181 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	CBX2	Q14781	532 aa	Predicted RBP	12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	UBE3C	Q15386	1083 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	KCTD1	Q719H9	257 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	RASGRP2	Q7LDG7	609 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	AFG1L	Q8WV93	481 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	MSLNL	Q96KJ4	702 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	C11orf84	Q9BUA3	381 aa	Predicted RBP	12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	PUS7L	Q9H0K6	701 aa	Known RBP	12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	HDAC6	Q9UBN7	1215 aa		12.19	□□□□□ -0.46
RRP12-215	ENST00000622320	C5orf67	F2Z3F1	127 aa		12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	GRM6	O15303	877 aa		12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	UPP2	O95045	317 aa		12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	EYA4	O95677	639 aa		12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	MCC	P23508	829 aa		12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	CALML3	P27482	149 aa		12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	NUBP1	P53384	320 aa		12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	HDAC1	Q13547	482 aa	Predicted RBP	12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	C7orf31	Q8N865	590 aa		12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	SMRP1	Q8NCR6	262 aa		12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	MPHOSPH6	Q99547	160 aa	Known RBP	12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	LRRCC1	Q9C099	1032 aa		12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	IGFLR1	Q9H665	355 aa		12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	ZNF287	Q9HBT7	754 aa		12.18	□□□□□ -0.46
RRP12-215	ENST00000622320	MED19	A0JLT2	244 aa	Predicted RBP	12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	KRT37	O76014	449 aa		12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	GH1	P01241	217 aa		12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms