RNA–Protein interactions for RNA: ENST00000621737.4

PTBP1-219, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,125 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-219ENST00000621737 FCHSD1Q86WN1 690 aa22.74■■□□□ 1.23
PTBP1-219ENST00000621737 TMEM199Q8N511 208 aa22.74■■□□□ 1.23
PTBP1-219ENST00000621737 DEFB123Q8N688 67 aa22.74■■□□□ 1.23
PTBP1-219ENST00000621737 IL31RAQ8NI17 732 aa22.74■■□□□ 1.23
PTBP1-219ENST00000621737 RNPC3Q96LT9 517 aaKnown RBP22.74■■□□□ 1.23
PTBP1-219ENST00000621737 HIPK3Q9H422 1215 aa22.74■■□□□ 1.23
PTBP1-219ENST00000621737 DDX41Q9UJV9 622 aaKnown RBP22.74■■□□□ 1.23
PTBP1-219ENST00000621737 FRMPD4Q14CM0 1322 aa22.74■■□□□ 1.23
PTBP1-219ENST00000621737 RGS20O76081 388 aa22.73■■□□□ 1.23
PTBP1-219ENST00000621737 MMP3P08254 477 aa22.73■■□□□ 1.23
PTBP1-219ENST00000621737 CCND2P30279 289 aa22.73■■□□□ 1.23
PTBP1-219ENST00000621737 ADCK5Q3MIX3 580 aa22.73■■□□□ 1.23
PTBP1-219ENST00000621737 APOA5Q6Q788 366 aa22.73■■□□□ 1.23
PTBP1-219ENST00000621737 TMTC3Q6ZXV5 915 aa22.73■■□□□ 1.23
PTBP1-219ENST00000621737 MICU3Q86XE3 530 aa22.73■■□□□ 1.23
PTBP1-219ENST00000621737 RAB11FIP4Q86YS3 637 aa22.73■■□□□ 1.23
PTBP1-219ENST00000621737 FANCBQ8NB91 859 aa22.73■■□□□ 1.23
PTBP1-219ENST00000621737 AFG1LQ8WV93 481 aa22.73■■□□□ 1.23
PTBP1-219ENST00000621737 EMID1Q96A84 441 aaPredicted RBP22.73■■□□□ 1.23
PTBP1-219ENST00000621737 CSF2RAP15509 400 aa22.72■■□□□ 1.23
PTBP1-219ENST00000621737 NBPF20Q3BBV1 942 aa22.72■■□□□ 1.23
PTBP1-219ENST00000621737 NFRKBQ6P4R8 1299 aa22.72■■□□□ 1.23
PTBP1-219ENST00000621737 KCNV1Q6PIU1 500 aa22.72■■□□□ 1.23
PTBP1-219ENST00000621737 SYNE3Q6ZMZ3 975 aa22.72■■□□□ 1.23
PTBP1-219ENST00000621737 Q7L0L9 218 aa22.72■■□□□ 1.23
PTBP1-219ENST00000621737 CMTR1Q8N1G2 835 aaKnown RBP22.72■■□□□ 1.23
PTBP1-219ENST00000621737 NOC4LQ9BVI4 516 aaKnown RBP22.72■■□□□ 1.23
PTBP1-219ENST00000621737 HMGB1P09429 215 aaKnown RBP22.71■■□□□ 1.23
PTBP1-219ENST00000621737 SUPT20HL2P0C7V6 817 aa22.71■■□□□ 1.23
PTBP1-219ENST00000621737 CYP2C18P33260 490 aa22.71■■□□□ 1.23
PTBP1-219ENST00000621737 FAM109BQ6ICB4 259 aaPredicted RBP22.71■■□□□ 1.23
PTBP1-219ENST00000621737 KCNB2Q92953 911 aa22.71■■□□□ 1.23
PTBP1-219ENST00000621737 TCEANC2Q96MN5 208 aa22.71■■□□□ 1.23
PTBP1-219ENST00000621737 TRMT13Q9NUP7 481 aaKnown RBP22.71■■□□□ 1.23
PTBP1-219ENST00000621737 PIK3CDO00329 1044 aa22.7■■□□□ 1.22
PTBP1-219ENST00000621737 SMAD3P84022 425 aaKnown RBP22.7■■□□□ 1.22
PTBP1-219ENST00000621737 PTPN11Q06124 597 aaPredicted RBP22.7■■□□□ 1.22
PTBP1-219ENST00000621737 LAMC2Q13753 1193 aa22.7■■□□□ 1.22
PTBP1-219ENST00000621737 FAM47CQ5HY64 1035 aa22.7■■□□□ 1.22
PTBP1-219ENST00000621737 PPTC7Q8NI37 304 aa22.7■■□□□ 1.22
PTBP1-219ENST00000621737 CUL5Q93034 780 aa22.7■■□□□ 1.22
PTBP1-219ENST00000621737 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.7■■□□□ 1.221e-9■■□□□ 13.6
PTBP1-219ENST00000621737 RBM28Q9NW13 759 aaKnown RBP22.7■■□□□ 1.22
PTBP1-219ENST00000621737 UMODL1Q5DID0 1318 aa22.7■■□□□ 1.22
PTBP1-219ENST00000621737 STAM2O75886 525 aa22.69■■□□□ 1.22
PTBP1-219ENST00000621737 TGFB3P10600 412 aa22.69■■□□□ 1.22
PTBP1-219ENST00000621737 CASTP20810 708 aaKnown RBP22.69■■□□□ 1.22
PTBP1-219ENST00000621737 HSPA4P34932 840 aa22.69■■□□□ 1.22
PTBP1-219ENST00000621737 DGKDQ16760 1214 aa22.69■■□□□ 1.22
PTBP1-219ENST00000621737 PSRC1Q6PGN9 363 aaPredicted RBP22.69■■□□□ 1.22
PTBP1-219ENST00000621737 DHX37Q8IY37 1157 aaKnown RBP22.69■■□□□ 1.22
PTBP1-219ENST00000621737 SMARCC2Q8TAQ2 1214 aa22.69■■□□□ 1.22
PTBP1-219ENST00000621737 BRPF3Q9ULD4 1205 aa22.69■■□□□ 1.22
PTBP1-219ENST00000621737 MEIS2O14770 477 aa22.68■■□□□ 1.22
PTBP1-219ENST00000621737 ZBTB43O43298 467 aa22.68■■□□□ 1.22
PTBP1-219ENST00000621737 REC8O95072 547 aa22.68■■□□□ 1.22
PTBP1-219ENST00000621737 UBA1P22314 1058 aaKnown RBP22.68■■□□□ 1.22
PTBP1-219ENST00000621737 TMEM240Q5SV17 173 aa22.68■■□□□ 1.22
PTBP1-219ENST00000621737 USP17L6PQ6QN14 398 aa22.68■■□□□ 1.22
PTBP1-219ENST00000621737 C16orf59Q7L2K0 433 aa22.68■■□□□ 1.22
PTBP1-219ENST00000621737 CCDC82Q8N4S0 544 aa22.68■■□□□ 1.22
PTBP1-219ENST00000621737 WNT8AQ9H1J5 351 aa22.68■■□□□ 1.22
PTBP1-219ENST00000621737 IL23AQ9NPF7 189 aa22.68■■□□□ 1.22
PTBP1-219ENST00000621737 MTMR10Q9NXD2 777 aa22.68■■□□□ 1.22
PTBP1-219ENST00000621737 MYH7BA7E2Y1 1941 aa22.67■■□□□ 1.22
PTBP1-219ENST00000621737 CNTNAP5Q8WYK1 1306 aa22.67■■□□□ 1.22
PTBP1-219ENST00000621737 hCG_1642624A0A1W2PR95 340 aa22.67■■□□□ 1.22
PTBP1-219ENST00000621737 CYP2C9P11712 490 aa22.67■■□□□ 1.22
PTBP1-219ENST00000621737 RCAN1P53805 252 aa22.67■■□□□ 1.22
PTBP1-219ENST00000621737 RTN1Q16799 776 aa22.67■■□□□ 1.22
PTBP1-219ENST00000621737 GNPTABQ3T906 1256 aa22.67■■□□□ 1.22
PTBP1-219ENST00000621737 CELF3Q5SZQ8 465 aaKnown RBP22.67■■□□□ 1.22
PTBP1-219ENST00000621737 MYSM1Q5VVJ2 828 aa22.67■■□□□ 1.22
PTBP1-219ENST00000621737 KAT2BQ92831 832 aa22.67■■□□□ 1.22
PTBP1-219ENST00000621737 INPP4AQ96PE3 977 aaPredicted RBP22.67■■□□□ 1.22
PTBP1-219ENST00000621737 GGPS1O95749 300 aa22.66■■□□□ 1.22
PTBP1-219ENST00000621737 HOXD8P13378 290 aaPredicted RBP22.66■■□□□ 1.22
PTBP1-219ENST00000621737 CCL23P55773 120 aa22.66■■□□□ 1.22
PTBP1-219ENST00000621737 MRPS9P82933 396 aaKnown RBP22.66■■□□□ 1.22
PTBP1-219ENST00000621737 XRRA1Q6P2D8 792 aa22.66■■□□□ 1.22
PTBP1-219ENST00000621737 SESTD1Q86VW0 696 aa22.66■■□□□ 1.22
PTBP1-219ENST00000621737 PPP1R13LQ8WUF5 828 aa22.66■■□□□ 1.22
PTBP1-219ENST00000621737 ZFP91Q96JP5 570 aaPredicted RBP22.66■■□□□ 1.22
PTBP1-219ENST00000621737 PSTPIP2Q9H939 334 aa22.66■■□□□ 1.22
PTBP1-219ENST00000621737 SNX14Q9Y5W7 946 aa22.66■■□□□ 1.22
PTBP1-219ENST00000621737 TANC1Q9C0D5 1861 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 KLF18A0A0U1RQI7 1052 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 F2P00734 622 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 ACRP10323 421 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 ICAM3P32942 547 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 CHMP4BP1P59074 171 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 SP2Q02086 613 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 FUT2Q10981 343 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 ZNF697Q5TEC3 545 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 RASIP1Q5U651 963 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 PCNX4Q63HM2 1172 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 ZNF365Q70YC5 407 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 HEATR3Q7Z4Q2 680 aa22.65■■□□□ 1.22
PTBP1-219ENST00000621737 GPKOWQ92917 476 aaPredicted RBP eCLIP22.65■■□□□ 1.22
PTBP1-219ENST00000621737 SPATA33Q96N06 139 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms