RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ALG1Q9BT22 464 aa16.41■□□□□ 0.22
CBWD3-217ENST00000621474 GLT8D2Q9H1C3 349 aa16.41■□□□□ 0.22
CBWD3-217ENST00000621474 C6orf50Q9HD87 102 aa16.41■□□□□ 0.22
CBWD3-217ENST00000621474 KCNJ14Q9UNX9 436 aa16.41■□□□□ 0.22
CBWD3-217ENST00000621474 SYNRGQ9UMZ2 1314 aa16.4■□□□□ 0.22
CBWD3-217ENST00000621474 B4DLN1 442 aa16.4■□□□□ 0.22
CBWD3-217ENST00000621474 CTAGE5O15320 804 aa16.4■□□□□ 0.22
CBWD3-217ENST00000621474 ADAMTS4O75173 837 aa16.4■□□□□ 0.22
CBWD3-217ENST00000621474 EIF3JO75822 258 aaKnown RBP16.4■□□□□ 0.22
CBWD3-217ENST00000621474 GNA11P29992 359 aa16.4■□□□□ 0.22
CBWD3-217ENST00000621474 AP3B2Q13367 1082 aa16.4■□□□□ 0.22
CBWD3-217ENST00000621474 JAKMIP3Q5VZ66 844 aa16.4■□□□□ 0.22
CBWD3-217ENST00000621474 CCDC62Q6P9F0 684 aa16.4■□□□□ 0.22
CBWD3-217ENST00000621474 FAM177A1Q8N128 213 aaPredicted RBP16.4■□□□□ 0.22
CBWD3-217ENST00000621474 REXO1Q8N1G1 1221 aaKnown RBP16.4■□□□□ 0.22
CBWD3-217ENST00000621474 DAGLBQ8NCG7 672 aa16.4■□□□□ 0.22
CBWD3-217ENST00000621474 MPHOSPH6Q99547 160 aaKnown RBP16.4■□□□□ 0.22
CBWD3-217ENST00000621474 ANO3Q9BYT9 981 aa16.4■□□□□ 0.22
CBWD3-217ENST00000621474 MYADML2A6NDP7 307 aa16.39■□□□□ 0.21
CBWD3-217ENST00000621474 EDIL3O43854 480 aa16.39■□□□□ 0.21
CBWD3-217ENST00000621474 DUSP11O75319 330 aaKnown RBP16.39■□□□□ 0.21
CBWD3-217ENST00000621474 PGK1P00558 417 aa16.39■□□□□ 0.21
CBWD3-217ENST00000621474 RARBP10826 455 aa16.39■□□□□ 0.21
CBWD3-217ENST00000621474 CCND2P30279 289 aa16.39■□□□□ 0.21
CBWD3-217ENST00000621474 NLRP5P59047 1200 aa16.39■□□□□ 0.21
CBWD3-217ENST00000621474 TNFAIP2Q03169 654 aa16.39■□□□□ 0.21
CBWD3-217ENST00000621474 IQSEC1Q6DN90 963 aa16.39■□□□□ 0.21
CBWD3-217ENST00000621474 DIS3LQ8TF46 1054 aaKnown RBP16.39■□□□□ 0.21
CBWD3-217ENST00000621474 INPP4AQ96PE3 977 aaPredicted RBP16.39■□□□□ 0.21
CBWD3-217ENST00000621474 WDR11Q9BZH6 1224 aa16.39■□□□□ 0.21
CBWD3-217ENST00000621474 PCDHA4Q9UN74 947 aa16.39■□□□□ 0.21
CBWD3-217ENST00000621474 ALPK3Q96L96 1907 aa16.39■□□□□ 0.21
CBWD3-217ENST00000621474 FOSP01100 380 aaPredicted RBP16.38■□□□□ 0.21
CBWD3-217ENST00000621474 TFRCP02786 760 aaKnown RBP16.38■□□□□ 0.21
CBWD3-217ENST00000621474 SREBF1P36956 1147 aa16.38■□□□□ 0.21
CBWD3-217ENST00000621474 SEMA3FQ13275 785 aa16.38■□□□□ 0.21
CBWD3-217ENST00000621474 DUSP28Q4G0W2 176 aa16.38■□□□□ 0.21
CBWD3-217ENST00000621474 SEPT14Q6ZU15 432 aa16.38■□□□□ 0.21
CBWD3-217ENST00000621474 SCFD2Q8WU76 684 aa16.38■□□□□ 0.21
CBWD3-217ENST00000621474 XPNPEP3Q9NQH7 507 aa16.38■□□□□ 0.21
CBWD3-217ENST00000621474 ITGB5P18084 799 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 NKX3-2P78367 333 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 LRRC41Q15345 812 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 CCSAPQ6IQ19 270 aaPredicted RBP16.37■□□□□ 0.21
CBWD3-217ENST00000621474 BLIDQ8IZY5 108 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 OXER1Q8TDS5 423 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 WASF1Q92558 559 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 COPS5Q92905 334 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 UPF3AQ9H1J1 476 aaKnown RBP16.37■□□□□ 0.21
CBWD3-217ENST00000621474 RTEL1Q9NZ71 1219 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 TNRC18O15417 2968 aaPredicted RBP16.37■□□□□ 0.21
CBWD3-217ENST00000621474 STAM2O75886 525 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 RGS19P49795 217 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 GJA9P57773 515 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 HMGN5P82970 282 aaKnown RBP16.37■□□□□ 0.21
CBWD3-217ENST00000621474 SP2Q02086 613 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 CUL4AQ13619 759 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 LY6KQ17RY6 165 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 XRRA1Q6P2D8 792 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 TLK2Q86UE8 772 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 ANKLE1Q8NAG6 615 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 KLHDC9Q8NEP7 349 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 CYP2W1Q8TAV3 490 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 BICD2Q8TD16 824 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 DDX41Q9UJV9 622 aaKnown RBP16.37■□□□□ 0.21
CBWD3-217ENST00000621474 UBIAD1Q9Y5Z9 338 aa16.37■□□□□ 0.21
CBWD3-217ENST00000621474 TXNP10599 105 aaKnown RBP16.36■□□□□ 0.21
CBWD3-217ENST00000621474 COL6A1P12109 1028 aa16.36■□□□□ 0.21
CBWD3-217ENST00000621474 ICAM3P32942 547 aa16.36■□□□□ 0.21
CBWD3-217ENST00000621474 ARHGAP4P98171 946 aa16.36■□□□□ 0.21
CBWD3-217ENST00000621474 TTLL4Q14679 1199 aa16.36■□□□□ 0.21
CBWD3-217ENST00000621474 EARS2Q5JPH6 523 aaKnown RBP16.36■□□□□ 0.21
CBWD3-217ENST00000621474 KRT40Q6A162 431 aa16.36■□□□□ 0.21
CBWD3-217ENST00000621474 GALNT17Q6IS24 598 aa16.36■□□□□ 0.21
CBWD3-217ENST00000621474 TNFRSF25Q93038 417 aa16.36■□□□□ 0.21
CBWD3-217ENST00000621474 SNX21Q969T3 373 aa16.36■□□□□ 0.21
CBWD3-217ENST00000621474 BCAS3Q9H6U6 928 aa16.36■□□□□ 0.21
CBWD3-217ENST00000621474 Q9Y3F1 56 aa16.36■□□□□ 0.21
CBWD3-217ENST00000621474 DNM1LO00429 736 aa16.35■□□□□ 0.21
CBWD3-217ENST00000621474 MMP1P03956 469 aa16.35■□□□□ 0.21
CBWD3-217ENST00000621474 CAPN2P17655 700 aa16.35■□□□□ 0.21
CBWD3-217ENST00000621474 XBP1P17861 261 aa16.35■□□□□ 0.21
CBWD3-217ENST00000621474 CST5P28325 142 aaPredicted RBP16.35■□□□□ 0.21
CBWD3-217ENST00000621474 FOSBP53539 338 aa16.35■□□□□ 0.21
CBWD3-217ENST00000621474 SPATA31C2B4DYI2 1134 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 FAM86B1E9PN63 330 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 K7ELQ4 463 aaPredicted RBP16.34■□□□□ 0.21
CBWD3-217ENST00000621474 FARP2O94887 1054 aaPredicted RBP16.34■□□□□ 0.21
CBWD3-217ENST00000621474 CYP3A4P08684 503 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 FAM86B2P0C5J1 330 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 UBA1P22314 1058 aaKnown RBP16.34■□□□□ 0.21
CBWD3-217ENST00000621474 ARHGAP1Q07960 439 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 NR5A1Q13285 461 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 IFFO2Q5TF58 517 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 MCTP2Q6DN12 878 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 PAWRQ96IZ0 340 aaKnown RBP16.34■□□□□ 0.21
CBWD3-217ENST00000621474 MRVI1Q9Y6F6 885 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 IGLV3-22A0A075B6J6 115 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 NKRFO15226 690 aaKnown RBP eCLIP16.34■□□□□ 0.21
CBWD3-217ENST00000621474 DYNC1LI2O43237 492 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms