RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 SMYD3Q9H7B4 428 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 ST7Q9NRC1 585 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 PAIP2BQ9ULR5 123 aaKnown RBP10.73□□□□□ -0.69
COL4A6-210ENST00000621266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL4A6-210ENST00000621266 CLRN2A0PK11 232 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 DYTNA2CJ06 578 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 SGK1O00141 431 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 CYP2J2P51589 502 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 KIAA0825Q8IV33 1275 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 ENOX1Q8TC92 643 aaKnown RBP10.73□□□□□ -0.69
COL4A6-210ENST00000621266 ZNF229Q9UJW7 825 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 GTPBP10A4D1E9 387 aaKnown RBP10.73□□□□□ -0.69
COL4A6-210ENST00000621266 NOP56O00567 594 aaKnown RBP10.73□□□□□ -0.69
COL4A6-210ENST00000621266 STAM2O75886 525 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 SLFN14P0C7P3 912 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 CDC25BP30305 580 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 MYO1EQ12965 1108 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 SUCLG2Q96I99 432 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 FBXO2Q9UK22 296 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-210ENST00000621266 ZMYM4Q5VZL5 1548 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 MAPK13O15264 365 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 CRKLP46109 303 aaKnown RBP10.73□□□□□ -0.69
COL4A6-210ENST00000621266 TSPY1Q01534 308 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 ITKQ08881 620 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 RBL2Q08999 1139 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 CALCRLQ16602 461 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 FLCNQ8NFG4 579 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 USP40Q9NVE5 1235 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 INSRP06213 1382 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 SPDYE16A6NNV3 312 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-210ENST00000621266 S100BP04271 92 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-210ENST00000621266 SPDYE2Q495Y8 402 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-210ENST00000621266 APPBP2Q92624 585 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 SH2D4AQ9H788 454 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 GOLGA8QA0A0J9YX86 632 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 GOLGA8OA6NCC3 632 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 RASSF10A6NK89 507 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 GOLGA8NF8WBI6 632 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 LPXNO60711 386 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 CCDC85BQ15834 202 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-210ENST00000621266 ADALQ6DHV7 355 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 BBOF1Q8ND07 529 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 RUNDC3BQ96NL0 473 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 MAGED2Q9UNF1 606 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-210ENST00000621266 DNM3Q9UQ16 869 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 MAST3O60307 1309 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 DDIT3P35638 169 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 MRPS25P82663 173 aaKnown RBP10.72□□□□□ -0.69
COL4A6-210ENST00000621266 NUGGCQ68CJ6 796 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 MAPKAPK5Q8IW41 473 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 LPIN2Q92539 896 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 IQCDQ96DY2 449 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 CXorf56Q9H5V9 222 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 ADAM21Q9UKJ8 722 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 SYCE1LA8MT33 242 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 MOCS3O95396 460 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 DNM2P50570 870 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 FAM186BQ8IYM0 893 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 ZBED4O75132 1171 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 SEPT2Q15019 361 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 R3HDM1Q15032 1099 aaKnown RBP10.72□□□□□ -0.69
COL4A6-210ENST00000621266 ME3Q16798 604 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 C6orf118Q5T5N4 469 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 OLFML2BQ68BL8 750 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 TRIM50Q86XT4 487 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL4A6-210ENST00000621266 CACTINQ8WUQ7 758 aaKnown RBP10.72□□□□□ -0.69
COL4A6-210ENST00000621266 TMEM87BQ96K49 555 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 GIMAP4Q9NUV9 329 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 ANGEL1Q9UNK9 670 aaKnown RBP10.72□□□□□ -0.69
COL4A6-210ENST00000621266 HMGB1P1B2RPK0 211 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-210ENST00000621266 H3BRJ5 948 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 GYG2O15488 501 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 KRT75O95678 551 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 XRCC5P13010 732 aaKnown RBP10.72□□□□□ -0.69
COL4A6-210ENST00000621266 IRX1P78414 480 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-210ENST00000621266 LLGL1Q15334 1064 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 BEND6Q5SZJ8 279 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-210ENST00000621266 TRIM59Q8IWR1 403 aa10.72□□□□□ -0.69
COL4A6-210ENST00000621266 EFCAB6Q5THR3 1501 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 MCF2LO15068 1137 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 NVLO15381 856 aaKnown RBP10.71□□□□□ -0.69
COL4A6-210ENST00000621266 GNA14O95837 355 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 TNNI1P19237 187 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 CTDSPL2Q05D32 466 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 ACRBPQ8NEB7 543 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 SERPINI1Q99574 410 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 MESDQ14696 234 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 ATG16L1Q676U5 607 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 CDKL2Q92772 493 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 TRPV6Q9H1D0 765 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 ADGBQ8N7X0 1667 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 SOWAHDA6NJG2 315 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 PRPF6O94906 941 aaKnown RBP10.71□□□□□ -0.69
COL4A6-210ENST00000621266 NDUFA8P51970 172 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 PLCB4Q15147 1175 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 TRIM60Q495X7 471 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 VPS54Q9P1Q0 977 aa10.71□□□□□ -0.69
COL4A6-210ENST00000621266 ASAP1Q9ULH1 1129 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms