RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 BMP6P22004 513 aa10.02□□□□□ -0.8
GGA3-222ENST00000621217 SEC23AQ15436 765 aa10.02□□□□□ -0.8
GGA3-222ENST00000621217 PKN1Q16512 942 aa10.02□□□□□ -0.8
GGA3-222ENST00000621217 ASPRV1Q53RT3 343 aa10.02□□□□□ -0.8
GGA3-222ENST00000621217 TCP11X2Q5H9J9 407 aa10.02□□□□□ -0.8
GGA3-222ENST00000621217 GPATCH4Q5T3I0 446 aaKnown RBP10.02□□□□□ -0.8
GGA3-222ENST00000621217 ADGRF4Q8IZF3 695 aa10.02□□□□□ -0.8
GGA3-222ENST00000621217 BPIFA3Q9BQP9 254 aa10.02□□□□□ -0.8
GGA3-222ENST00000621217 HPSEQ9Y251 543 aa10.02□□□□□ -0.8
GGA3-222ENST00000621217 ROBO1Q9Y6N7 1651 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 AFDNP55196 1824 aaKnown RBP10.02□□□□□ -0.81
GGA3-222ENST00000621217 CNTNAP5Q8WYK1 1306 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 ORC4O43929 436 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 NEBLO76041 1014 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 MAGEA1P43355 309 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 GPBP1Q86WP2 473 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 RTKN2Q8IZC4 609 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 SH2D4AQ9H788 454 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 SWAP70Q9UH65 585 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 PCDHB13Q9Y5F0 798 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 SFI1A8K8P3 1242 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 MFAP3LO75121 409 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 SPP2Q13103 211 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 ICE2Q659A1 982 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 MAATS1Q7Z4T9 603 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 CHURC1Q8WUH1 139 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 PARD6BQ9BYG5 372 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 DHX36Q9H2U1 1008 aaKnown RBP10.02□□□□□ -0.81
GGA3-222ENST00000621217 DDX4Q9NQI0 724 aaKnown RBP10.02□□□□□ -0.81
GGA3-222ENST00000621217 MTMR4Q9NYA4 1195 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 HDAC6Q9UBN7 1215 aa10.02□□□□□ -0.81
GGA3-222ENST00000621217 GPR75-ASB3A0A0A6YYF3 556 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 DDTLA6NHG4 134 aaPredicted RBP10.01□□□□□ -0.81
GGA3-222ENST00000621217 CCDC169A6NNP5 214 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 GAS7O60861 476 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 ATP2C1P98194 919 aaPredicted RBP10.01□□□□□ -0.81
GGA3-222ENST00000621217 SEPT7Q16181 437 aaKnown RBP10.01□□□□□ -0.81
GGA3-222ENST00000621217 QRICH1Q2TAL8 776 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 ARFGAP2Q8N6H7 521 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 TC2NQ8N9U0 490 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 RTFDC1Q9BY42 306 aaPredicted RBP10.01□□□□□ -0.81
GGA3-222ENST00000621217 IFIH1Q9BYX4 1025 aaKnown RBP10.01□□□□□ -0.81
GGA3-222ENST00000621217 TMOD4Q9NZQ9 345 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 FAM205AQ6ZU69 1335 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 A6NNZ2 444 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 STAT2P52630 851 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 TUBB8Q3ZCM7 444 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 POTEAQ6S8J7 498 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 RAD9BQ6WBX8 426 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 SLC30A10Q6XR72 485 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 EHBP1Q8NDI1 1231 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 RRP15Q9Y3B9 282 aaKnown RBP10.01□□□□□ -0.81
GGA3-222ENST00000621217 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.01□□□□□ -0.816e-6■□□□□ 10.8
GGA3-222ENST00000621217 DISP2A7MBM2 1401 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 TTC26A0AVF1 554 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 DCAF8L1A6NGE4 600 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 TMEM110-MUSTN1A8MSY1 372 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 EFCAB8A8MWE9 144 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 EIF2AK2P19525 551 aaKnown RBP10.01□□□□□ -0.81
GGA3-222ENST00000621217 HNRNPH2P55795 449 aaKnown RBP10.01□□□□□ -0.81
GGA3-222ENST00000621217 TNFAIP1Q13829 316 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 RASA3Q14644 834 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 SHROOM1Q2M3G4 852 aaPredicted RBP10.01□□□□□ -0.81
GGA3-222ENST00000621217 GADL1Q6ZQY3 521 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 CCDC65Q8IXS2 484 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 ZNF579Q8NAF0 562 aaKnown RBP10.01□□□□□ -0.81
GGA3-222ENST00000621217 LARP4BQ92615 738 aaKnown RBP10.01□□□□□ -0.81
GGA3-222ENST00000621217 DNM3Q9UQ16 869 aa10.01□□□□□ -0.81
GGA3-222ENST00000621217 A0A0U1RQJ8 604 aa10□□□□□ -0.81
GGA3-222ENST00000621217 NDUFAB1O14561 156 aa10□□□□□ -0.81
GGA3-222ENST00000621217 ZEB2O60315 1214 aa10□□□□□ -0.81
GGA3-222ENST00000621217 GCNT3O95395 438 aa10□□□□□ -0.81
GGA3-222ENST00000621217 TRAPPC10P48553 1259 aa10□□□□□ -0.81
GGA3-222ENST00000621217 SF3A3Q12874 501 aaKnown RBP eCLIP10□□□□□ -0.811e-6■■■■□ 20.4
GGA3-222ENST00000621217 AP1ARQ63HQ0 302 aa10□□□□□ -0.81
GGA3-222ENST00000621217 CCDC50Q8IVM0 306 aa10□□□□□ -0.81
GGA3-222ENST00000621217 MYCT1Q8N699 235 aa10□□□□□ -0.81
GGA3-222ENST00000621217 P2RX5Q93086 422 aa10□□□□□ -0.81
GGA3-222ENST00000621217 FBXO28Q9NVF7 368 aa10□□□□□ -0.81
GGA3-222ENST00000621217 PCDHA6Q9UN73 950 aa10□□□□□ -0.81
GGA3-222ENST00000621217 PCDHA8Q9Y5H6 950 aa10□□□□□ -0.81
GGA3-222ENST00000621217 STAT3P40763 770 aa10□□□□□ -0.81
GGA3-222ENST00000621217 ARHGAP25P42331 645 aa10□□□□□ -0.81
GGA3-222ENST00000621217 KLK7P49862 253 aa10□□□□□ -0.81
GGA3-222ENST00000621217 DNM2P50570 870 aa10□□□□□ -0.81
GGA3-222ENST00000621217 POLR2FP61218 127 aaKnown RBP10□□□□□ -0.81
GGA3-222ENST00000621217 STRIP1Q5VSL9 837 aa10□□□□□ -0.81
GGA3-222ENST00000621217 KRT26Q7Z3Y9 468 aa10□□□□□ -0.81
GGA3-222ENST00000621217 CERS5Q8N5B7 392 aa10□□□□□ -0.81
GGA3-222ENST00000621217 SECISBP2LQ93073 1101 aaKnown RBP10□□□□□ -0.81
GGA3-222ENST00000621217 CCDC113Q9H0I3 377 aa10□□□□□ -0.81
GGA3-222ENST00000621217 RWDD2AQ9UIY3 292 aa10□□□□□ -0.81
GGA3-222ENST00000621217 PRDM4Q9UKN5 801 aa10□□□□□ -0.81
GGA3-222ENST00000621217 ECE1P42892 770 aa10□□□□□ -0.81
GGA3-222ENST00000621217 GRM4Q14833 912 aa10□□□□□ -0.81
GGA3-222ENST00000621217 SYDE2Q5VT97 1194 aa10□□□□□ -0.81
GGA3-222ENST00000621217 NYAP1Q6ZVC0 841 aa10□□□□□ -0.81
GGA3-222ENST00000621217 SULF1Q8IWU6 871 aa10□□□□□ -0.81
GGA3-222ENST00000621217 PROM2Q8N271 834 aa10□□□□□ -0.81
GGA3-222ENST00000621217 PIGOQ8TEQ8 1089 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms