RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ERFEQ4G0M1 354 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 HAUS3Q68CZ6 603 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 MSL3Q8N5Y2 521 aaKnown RBP7.68□□□□□ -1.18
NEDD9-216ENST00000620854 MTMR8Q96EF0 704 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 CABS1Q96KC9 395 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 CCDC114Q96M63 670 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 DUSP9Q99956 384 aaKnown RBP7.68□□□□□ -1.18
NEDD9-216ENST00000620854 TRIM31Q9BZY9 425 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 RPSAP08865 295 aaKnown RBP7.67□□□□□ -1.18
NEDD9-216ENST00000620854 SRGNP10124 158 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 PLCG1P19174 1290 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 FECHP22830 423 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 ARID4AP29374 1257 aaPredicted RBP7.67□□□□□ -1.18
NEDD9-216ENST00000620854 EPHB4P54760 987 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 CCT8L2Q96SF2 557 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 NARFQ9UHQ1 456 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 ZNF233A6NK53 670 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 MEFVO15553 781 aaPredicted RBP7.67□□□□□ -1.18
NEDD9-216ENST00000620854 FGFR1OPO95684 399 aaKnown RBP7.67□□□□□ -1.18
NEDD9-216ENST00000620854 NR1D1P20393 614 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 EEF1GP26641 437 aaKnown RBP7.67□□□□□ -1.18
NEDD9-216ENST00000620854 FUT2Q10981 343 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 NAA35Q5VZE5 725 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 TTI2Q6NXR4 508 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 TMTC3Q6ZXV5 915 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 BLIDQ8IZY5 108 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 LRRC15Q8TF66 581 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 SMIM23A6NLE4 172 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 CCNT1O60563 726 aaKnown RBP7.67□□□□□ -1.18
NEDD9-216ENST00000620854 SHOX2O60902 331 aaPredicted RBP7.67□□□□□ -1.18
NEDD9-216ENST00000620854 TXKP42681 527 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 AMPD3Q01432 767 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 UBE4AQ14139 1066 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 TXNRD1Q16881 649 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 B4GALNT4Q76KP1 1039 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 POTEDQ86YR6 584 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 P2RX5Q93086 422 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 AP1M1Q9BXS5 423 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 YY1AP1Q9H869 796 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 HYOU1Q9Y4L1 999 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 ABCC12Q96J65 1359 aa7.67□□□□□ -1.18
NEDD9-216ENST00000620854 LMO7Q8WWI1 1683 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 HGSO14964 777 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-216ENST00000620854 TSPY3P0CV98 308 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 TSPY8P0CW00 308 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 SUGP1Q8IWZ8 645 aaKnown RBP7.66□□□□□ -1.18
NEDD9-216ENST00000620854 RIC1Q4ADV7 1423 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 PDS5AQ29RF7 1337 aaKnown RBP7.66□□□□□ -1.18
NEDD9-216ENST00000620854 PALMO75781 387 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 ADRA2BP18089 450 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 ADAT2Q7Z6V5 191 aaKnown RBP7.66□□□□□ -1.18
NEDD9-216ENST00000620854 CCDC170Q8IYT3 715 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 GLIS3Q8NEA6 775 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 RTL9Q8NET4 1388 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 TBC1D31Q96DN5 1066 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 SH3GL2Q99962 352 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 TLR10Q9BXR5 811 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 SH2D4AQ9H788 454 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 ADAMTS1Q9UHI8 967 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 A0A1W2PQC6 194 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 CFAP221Q4G0U5 840 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 SLC27A3Q5K4L6 730 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 CHADLQ6NUI6 762 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 CABP7Q86V35 215 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 IFT20Q8IY31 132 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 TEX11Q8IYF3 940 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 LARGE2Q8N3Y3 721 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 ZNF473Q8WTR7 871 aaKnown RBP7.66□□□□□ -1.18
NEDD9-216ENST00000620854 UBLCP1Q8WVY7 318 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-216ENST00000620854 GJA10Q969M2 543 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 NDST4Q9H3R1 872 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 THAP9Q9H5L6 903 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 PLAAQ9Y263 795 aa7.66□□□□□ -1.18
NEDD9-216ENST00000620854 ANO9A1A5B4 782 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 KLRC4O43908 158 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 CCDC172P0C7W6 258 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 PDHBP11177 359 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 TCP1P17987 556 aaKnown RBP7.65□□□□□ -1.18
NEDD9-216ENST00000620854 SCP2P22307 547 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 ATP2B4P23634 1241 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 TRIM28Q13263 835 aaKnown RBP7.65□□□□□ -1.18
NEDD9-216ENST00000620854 MEA1Q16626 185 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 TNFRSF25Q93038 417 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 CNKSR1Q969H4 720 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 NOX5Q96PH1 765 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 KIF1AQ12756 1690 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 MARF1Q9Y4F3 1742 aaKnown RBP7.65□□□□□ -1.18
NEDD9-216ENST00000620854 TLDC2A0PJX2 215 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 KCNK3O14649 394 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 PPP1R37O75864 691 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 CCNE1P24864 410 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 LONP1P36776 959 aaKnown RBP7.65□□□□□ -1.18
NEDD9-216ENST00000620854 NAPAP54920 295 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 CACNB1Q02641 598 aaPredicted RBP7.65□□□□□ -1.18
NEDD9-216ENST00000620854 EMBQ6PCB8 327 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 CCDC121Q6ZUS5 278 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 NLRP14Q86W24 1093 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 NELFCDQ8IXH7 590 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 FNBP4Q8N3X1 1017 aaPredicted RBP7.65□□□□□ -1.18
NEDD9-216ENST00000620854 MMGT1Q8N4V1 131 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms