RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 C11orf49Q9H6J7 331 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 SPC25Q9HBM1 224 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 C6orf50Q9HD87 102 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 VPS54Q9P1Q0 977 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 PCDHA6Q9UN73 950 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 PCDHA8Q9Y5H6 950 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 KIAA1217Q5T5P2 1943 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 CLK2P49760 499 aaKnown RBP20.96■□□□□ 0.95
LITAF-220ENST00000620789 TTLL4Q14679 1199 aa20.96■□□□□ 0.95
LITAF-220ENST00000620789 PCNX4Q63HM2 1172 aa20.96■□□□□ 0.95
LITAF-220ENST00000620789 ZSCAN31Q96LW9 406 aaPredicted RBP20.96■□□□□ 0.95
LITAF-220ENST00000620789 Q9Y3F1 56 aa20.96■□□□□ 0.95
LITAF-220ENST00000620789 NKRFO15226 690 aaKnown RBP eCLIP20.95■□□□□ 0.94
LITAF-220ENST00000620789 STAM2O75886 525 aa20.95■□□□□ 0.94
LITAF-220ENST00000620789 RGS20O76081 388 aa20.95■□□□□ 0.94
LITAF-220ENST00000620789 ARIH2O95376 493 aa20.95■□□□□ 0.94
LITAF-220ENST00000620789 FOSP01100 380 aaPredicted RBP20.95■□□□□ 0.94
LITAF-220ENST00000620789 C6orf222P0C671 652 aaPredicted RBP20.95■□□□□ 0.94
LITAF-220ENST00000620789 TXNP10599 105 aaKnown RBP20.95■□□□□ 0.94
LITAF-220ENST00000620789 CST5P28325 142 aaPredicted RBP20.95■□□□□ 0.94
LITAF-220ENST00000620789 GNA11P29992 359 aa20.95■□□□□ 0.94
LITAF-220ENST00000620789 NKX3-2P78367 333 aa20.95■□□□□ 0.94
LITAF-220ENST00000620789 MRPS9P82933 396 aaKnown RBP20.95■□□□□ 0.94
LITAF-220ENST00000620789 ST3GAL1Q11201 340 aa20.95■□□□□ 0.94
LITAF-220ENST00000620789 AP3B2Q13367 1082 aa20.95■□□□□ 0.94
LITAF-220ENST00000620789 XRRA1Q6P2D8 792 aa20.95■□□□□ 0.94
LITAF-220ENST00000620789 CCDC62Q6P9F0 684 aa20.95■□□□□ 0.94
LITAF-220ENST00000620789 KLHDC9Q8NEP7 349 aa20.95■□□□□ 0.94
LITAF-220ENST00000620789 AP5M1Q9H0R1 490 aa20.95■□□□□ 0.94
LITAF-220ENST00000620789 EHMT1Q9H9B1 1298 aa20.95■□□□□ 0.94
LITAF-220ENST00000620789 MYADML2A6NDP7 307 aa20.94■□□□□ 0.94
LITAF-220ENST00000620789 DYNC1LI2O43237 492 aaPredicted RBP20.94■□□□□ 0.94
LITAF-220ENST00000620789 PTGS1P23219 599 aa20.94■□□□□ 0.94
LITAF-220ENST00000620789 IRX5P78411 483 aaPredicted RBP20.94■□□□□ 0.94
LITAF-220ENST00000620789 FAM177A1Q8N128 213 aaPredicted RBP20.94■□□□□ 0.94
LITAF-220ENST00000620789 NSUN7Q8NE18 718 aaKnown RBP20.94■□□□□ 0.94
LITAF-220ENST00000620789 BICD2Q8TD16 824 aa20.94■□□□□ 0.94
LITAF-220ENST00000620789 ZFP91Q96JP5 570 aaPredicted RBP20.94■□□□□ 0.94
LITAF-220ENST00000620789 AIFM3Q96NN9 605 aa20.94■□□□□ 0.94
LITAF-220ENST00000620789 TSEN34Q9BSV6 310 aaKnown RBP20.94■□□□□ 0.94
LITAF-220ENST00000620789 ANO3Q9BYT9 981 aa20.94■□□□□ 0.94
LITAF-220ENST00000620789 SH2B1Q9NRF2 756 aaPredicted RBP20.94■□□□□ 0.94
LITAF-220ENST00000620789 TMEM260Q9NX78 707 aa20.94■□□□□ 0.94
LITAF-220ENST00000620789 ORC3Q9UBD5 711 aaPredicted RBP20.94■□□□□ 0.94
LITAF-220ENST00000620789 MRVI1Q9Y6F6 885 aa20.94■□□□□ 0.94
LITAF-220ENST00000620789 CTAGE5O15320 804 aa20.93■□□□□ 0.94
LITAF-220ENST00000620789 DTNBO60941 627 aa20.93■□□□□ 0.94
LITAF-220ENST00000620789 GNPTABQ3T906 1256 aa20.93■□□□□ 0.94
LITAF-220ENST00000620789 MCTP2Q6DN12 878 aa20.93■□□□□ 0.94
LITAF-220ENST00000620789 CCSAPQ6IQ19 270 aaPredicted RBP20.93■□□□□ 0.94
LITAF-220ENST00000620789 REXO1Q8N1G1 1221 aaKnown RBP20.93■□□□□ 0.94
LITAF-220ENST00000620789 PGBD1Q96JS3 809 aa20.93■□□□□ 0.94
LITAF-220ENST00000620789 INPP4AQ96PE3 977 aaPredicted RBP20.93■□□□□ 0.94
LITAF-220ENST00000620789 HTATIP2Q9BUP3 242 aa20.93■□□□□ 0.94
LITAF-220ENST00000620789 SENP6Q9GZR1 1112 aaPredicted RBP20.93■□□□□ 0.94
LITAF-220ENST00000620789 PHF24Q9UPV7 400 aa20.93■□□□□ 0.94
LITAF-220ENST00000620789 ADAMTS3O15072 1205 aa20.92■□□□□ 0.94
LITAF-220ENST00000620789 FDPSP14324 419 aaKnown RBP20.92■□□□□ 0.94
LITAF-220ENST00000620789 NLRP5P59047 1200 aa20.92■□□□□ 0.94
LITAF-220ENST00000620789 KCNA10Q16322 511 aa20.92■□□□□ 0.94
LITAF-220ENST00000620789 FSCN1Q16658 493 aaKnown RBP20.92■□□□□ 0.94
LITAF-220ENST00000620789 LY6KQ17RY6 165 aa20.92■□□□□ 0.94
LITAF-220ENST00000620789 GNASQ5JWF2 1037 aa20.92■□□□□ 0.94
LITAF-220ENST00000620789 JAKMIP3Q5VZ66 844 aa20.92■□□□□ 0.94
LITAF-220ENST00000620789 KCNV1Q6PIU1 500 aa20.92■□□□□ 0.94
LITAF-220ENST00000620789 CCDC83Q8IWF9 413 aa20.92■□□□□ 0.94
LITAF-220ENST00000620789 PCSK9Q8NBP7 692 aaKnown RBP20.92■□□□□ 0.94
LITAF-220ENST00000620789 WASF1Q92558 559 aa20.92■□□□□ 0.94
LITAF-220ENST00000620789 COPS5Q92905 334 aa20.92■□□□□ 0.94
LITAF-220ENST00000620789 RTEL1Q9NZ71 1219 aa20.92■□□□□ 0.94
LITAF-220ENST00000620789 DDX41Q9UJV9 622 aaKnown RBP20.92■□□□□ 0.94
LITAF-220ENST00000620789 MOXD2PA6NHM9 499 aa20.91■□□□□ 0.94
LITAF-220ENST00000620789 JAK2O60674 1132 aa20.91■□□□□ 0.94
LITAF-220ENST00000620789 BEX3Q00994 111 aa20.91■□□□□ 0.94
LITAF-220ENST00000620789 OR6J1Q8NGC5 347 aa20.91■□□□□ 0.94
LITAF-220ENST00000620789 A0A1W2PQ45 241 aaPredicted RBP20.9■□□□□ 0.94
LITAF-220ENST00000620789 A0A1W2PQY0 241 aa20.9■□□□□ 0.94
LITAF-220ENST00000620789 CD2BP2O95400 341 aaKnown RBP20.9■□□□□ 0.94
LITAF-220ENST00000620789 GH1P01241 217 aa20.9■□□□□ 0.94
LITAF-220ENST00000620789 ASGR1P07306 291 aa20.9■□□□□ 0.94
LITAF-220ENST00000620789 TGFB3P10600 412 aa20.9■□□□□ 0.94
LITAF-220ENST00000620789 XBP1P17861 261 aa20.9■□□□□ 0.94
LITAF-220ENST00000620789 ICAM3P32942 547 aa20.9■□□□□ 0.94
LITAF-220ENST00000620789 SREBF1P36956 1147 aa20.9■□□□□ 0.94
LITAF-220ENST00000620789 ACLYP53396 1101 aa20.9■□□□□ 0.94
LITAF-220ENST00000620789 GALNT17Q6IS24 598 aa20.9■□□□□ 0.94
LITAF-220ENST00000620789 FERMT2Q96AC1 680 aa20.9■□□□□ 0.94
LITAF-220ENST00000620789 LLPHQ9BRT6 129 aaKnown RBP20.9■□□□□ 0.94
LITAF-220ENST00000620789 ALG1Q9BT22 464 aa20.9■□□□□ 0.94
LITAF-220ENST00000620789 PCDHA4Q9UN74 947 aa20.9■□□□□ 0.94
LITAF-220ENST00000620789 DNAH12Q6ZR08 3092 aa20.89■□□□□ 0.94
LITAF-220ENST00000620789 FIBPO43427 364 aa20.89■□□□□ 0.93
LITAF-220ENST00000620789 MCM2P49736 904 aa20.89■□□□□ 0.93
LITAF-220ENST00000620789 CPT1AP50416 773 aa20.89■□□□□ 0.93
LITAF-220ENST00000620789 ARHGAP1Q07960 439 aa20.89■□□□□ 0.93
LITAF-220ENST00000620789 NLRX1Q86UT6 975 aa20.89■□□□□ 0.93
LITAF-220ENST00000620789 DAGLBQ8NCG7 672 aa20.89■□□□□ 0.93
LITAF-220ENST00000620789 RASGRP4Q8TDF6 673 aa20.89■□□□□ 0.93
LITAF-220ENST00000620789 PHF20Q9BVI0 1012 aa20.89■□□□□ 0.93
LITAF-220ENST00000620789 UBIAD1Q9Y5Z9 338 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms