RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 SHC4Q6S5L8 630 aa17.5■□□□□ 0.39
SEMA3B-214ENST00000619119 DRAXINQ8NBI3 349 aaPredicted RBP17.5■□□□□ 0.39
SEMA3B-214ENST00000619119 ZIM3Q96PE6 472 aa17.5■□□□□ 0.39
SEMA3B-214ENST00000619119 HOMER3Q9NSC5 361 aa17.5■□□□□ 0.39
SEMA3B-214ENST00000619119 BAZ2BQ9UIF8 2168 aaKnown RBP17.5■□□□□ 0.39
SEMA3B-214ENST00000619119 PLSCR1O15162 318 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 DOK7Q18PE1 504 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 FILIP1LQ4L180 1135 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 KLHL10Q6JEL2 608 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 CCDC70Q6NSX1 233 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 C6orf89Q6UWU4 347 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 JAKMIP2Q96AA8 810 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 MYO1AQ9UBC5 1043 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 ARPP21Q9UBL0 812 aaPredicted RBP17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 TIAM2Q8IVF5 1701 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 SMNDC1O75940 238 aaKnown RBP eCLIP17.49■□□□□ 0.394e-6■■□□□ 12
SEMA3B-214ENST00000619119 PLEKHA8P1O95397 391 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 BAG3O95817 575 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 NR1D1P20393 614 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 BTDP43251 543 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 SCTRP47872 440 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 STX17P56962 302 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 GNPTABQ3T906 1256 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 CATIPQ7Z7H3 387 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 CRAMP1Q96RY5 1269 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 PSMD1Q99460 953 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 MXD3Q9BW11 206 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 ZCWPW1Q9H0M4 648 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 DMGDHQ9UI17 866 aaKnown RBP17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 MAN1B1Q9UKM7 699 aa17.49■□□□□ 0.39
SEMA3B-214ENST00000619119 BTBD18B2RXH4 712 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 FAM107AO95990 144 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 HPDP32754 393 aaPredicted RBP17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 IFFO1Q0D2I5 559 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 SLC30A9Q6PML9 568 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 BRAPQ7Z569 592 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 A0A1B0GTH6 734 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 SRGNP10124 158 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 PPP1R7Q15435 360 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 KDM7AQ6ZMT4 941 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 CCDC47Q96A33 483 aaKnown RBP17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 C15orf41Q9Y2V0 281 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 LAMB3Q13751 1172 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 CUL5Q93034 780 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 FAM167BQ9BTA0 163 aa17.48■□□□□ 0.39
SEMA3B-214ENST00000619119 ANP32DO95626 131 aa17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 GYPCP04921 128 aa17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 EPB41P11171 864 aaKnown RBP17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 PLCD1P51178 756 aa17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 USP4Q13107 963 aa17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 TCP11Q8WWU5 503 aa17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 MKNK2Q9HBH9 465 aa17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 GSTO1P78417 241 aa17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 TFAP4Q01664 338 aa17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 CNGA4Q8IV77 575 aa17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 TRIM58Q8NG06 486 aa17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 MED15Q96RN5 788 aa17.47■□□□□ 0.39
SEMA3B-214ENST00000619119 NR5A1Q13285 461 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 PNMA8AQ86V59 439 aaPredicted RBP17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 DIS3L2Q8IYB7 885 aaKnown RBP17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 B4GALNT2Q8NHY0 566 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 LRRC1Q9BTT6 524 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 RTFDC1Q9BY42 306 aaPredicted RBP17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 PRDM16Q9HAZ2 1276 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 LMCD1Q9NZU5 365 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 VPS54Q9P1Q0 977 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 V9GY48 417 aaPredicted RBP17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 NEFHP12036 1026 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 IL1R1P14778 569 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 MDH1P40925 334 aaKnown RBP17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 ELF3P78545 371 aaPredicted RBP17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 TMTC1Q8IUR5 882 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 GRAMD1CQ8IYS0 662 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 ENOX1Q8TC92 643 aaKnown RBP17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 ZNF570Q96NI8 536 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 ATP6V0A2Q9Y487 856 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 DUOX1Q9NRD9 1551 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 USP17L3A6NCW0 530 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 USP17L4A6NCW7 530 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 MGRN1O60291 552 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 RTN3O95197 1032 aaPredicted RBP17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 SF3A3Q12874 501 aaKnown RBP eCLIP17.46■□□□□ 0.396e-7■■□□□ 11.8
SEMA3B-214ENST00000619119 C12orf60Q5U649 245 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 USP17L1Q7RTZ2 530 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 SP8Q8IXZ3 490 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 EZH1Q92800 747 aaPredicted RBP17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 CCDC43Q96MW1 224 aaKnown RBP17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 NUP88Q99567 741 aaPredicted RBP17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 ZC3H12CQ9C0D7 883 aaKnown RBP17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 JADE2Q9NQC1 790 aa17.46■□□□□ 0.39
SEMA3B-214ENST00000619119 G3V3G9 751 aa17.45■□□□□ 0.38
SEMA3B-214ENST00000619119 PES1O00541 588 aaKnown RBP17.45■□□□□ 0.38
SEMA3B-214ENST00000619119 LDHCP07864 332 aa17.45■□□□□ 0.38
SEMA3B-214ENST00000619119 CLTAP09496 248 aa17.45■□□□□ 0.38
SEMA3B-214ENST00000619119 CCT6AP40227 531 aaKnown RBP17.45■□□□□ 0.38
SEMA3B-214ENST00000619119 TROAPQ12815 778 aa17.45■□□□□ 0.38
SEMA3B-214ENST00000619119 DCAF8Q5TAQ9 597 aa17.45■□□□□ 0.38
SEMA3B-214ENST00000619119 DPP8Q6V1X1 898 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms