RNA–Protein interactions for RNA: ENST00000619117.1

C9orf50-202, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf50, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-202ENST00000619117 TLR3O15455 904 aaKnown RBP17.6■□□□□ 0.41
C9orf50-202ENST00000619117 KPNA6O60684 536 aa17.6■□□□□ 0.41
C9orf50-202ENST00000619117 GH1P01241 217 aa17.6■□□□□ 0.41
C9orf50-202ENST00000619117 ITGB8P26012 769 aa17.6■□□□□ 0.41
C9orf50-202ENST00000619117 PSMA5P28066 241 aa17.6■□□□□ 0.41
C9orf50-202ENST00000619117 CCND2P30279 289 aa17.6■□□□□ 0.41
C9orf50-202ENST00000619117 ARHGAP1Q07960 439 aa17.6■□□□□ 0.41
C9orf50-202ENST00000619117 FUT2Q10981 343 aa17.6■□□□□ 0.41
C9orf50-202ENST00000619117 LRIT3Q3SXY7 679 aa17.6■□□□□ 0.41
C9orf50-202ENST00000619117 FCHSD1Q86WN1 690 aa17.6■□□□□ 0.41
C9orf50-202ENST00000619117 EMID1Q96A84 441 aaPredicted RBP17.6■□□□□ 0.41
C9orf50-202ENST00000619117 NID2Q14112 1375 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 MEIS2O14770 477 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 RGS20O76081 388 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 CD4P01730 458 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 MYL3P08590 195 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 MYCLP12524 364 aaPredicted RBP17.59■□□□□ 0.41
C9orf50-202ENST00000619117 CPA1P15085 419 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 RAG1P15918 1043 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 RPS6KB1P23443 525 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 PSMC6P62333 389 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 FGD1P98174 961 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 LY6KQ17RY6 165 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 KCNV1Q6PIU1 500 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 CCDC82Q8N4S0 544 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 CUL5Q93034 780 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 MTG1Q9BT17 334 aaPredicted RBP17.59■□□□□ 0.41
C9orf50-202ENST00000619117 AGXT2Q9BYV1 514 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 DDX41Q9UJV9 622 aaKnown RBP17.59■□□□□ 0.41
C9orf50-202ENST00000619117 MRVI1Q9Y6F6 885 aa17.59■□□□□ 0.41
C9orf50-202ENST00000619117 hCG_1642624A0A1W2PR95 340 aa17.58■□□□□ 0.4
C9orf50-202ENST00000619117 STAM2O75886 525 aa17.58■□□□□ 0.4
C9orf50-202ENST00000619117 USP17L6PQ6QN14 398 aa17.58■□□□□ 0.4
C9orf50-202ENST00000619117 Q6ZUG5 572 aa17.58■□□□□ 0.4
C9orf50-202ENST00000619117 SMARCC2Q8TAQ2 1214 aa17.58■□□□□ 0.4
C9orf50-202ENST00000619117 USP26Q9BXU7 913 aa17.58■□□□□ 0.4
C9orf50-202ENST00000619117 FAM217BQ9NTX9 383 aaPredicted RBP17.58■□□□□ 0.4
C9orf50-202ENST00000619117 KIAA1217Q5T5P2 1943 aa17.58■□□□□ 0.4
C9orf50-202ENST00000619117 SOX1O00570 391 aaPredicted RBP17.57■□□□□ 0.4
C9orf50-202ENST00000619117 TIMP1P01033 207 aa17.57■□□□□ 0.4
C9orf50-202ENST00000619117 MMP3P08254 477 aa17.57■□□□□ 0.4
C9orf50-202ENST00000619117 TGFB3P10600 412 aa17.57■□□□□ 0.4
C9orf50-202ENST00000619117 CASTP20810 708 aaKnown RBP17.57■□□□□ 0.4
C9orf50-202ENST00000619117 CDC27P30260 824 aa17.57■□□□□ 0.4
C9orf50-202ENST00000619117 APOBRQ0VD83 1088 aa17.57■□□□□ 0.4
C9orf50-202ENST00000619117 PPP1R18Q6NYC8 613 aa17.57■□□□□ 0.4
C9orf50-202ENST00000619117 HEATR3Q7Z4Q2 680 aa17.57■□□□□ 0.4
C9orf50-202ENST00000619117 TEX2Q8IWB9 1127 aa17.57■□□□□ 0.4
C9orf50-202ENST00000619117 AFG1LQ8WV93 481 aa17.57■□□□□ 0.4
C9orf50-202ENST00000619117 BRF1Q92994 677 aa17.57■□□□□ 0.4
C9orf50-202ENST00000619117 INPP4AQ96PE3 977 aaPredicted RBP17.57■□□□□ 0.4
C9orf50-202ENST00000619117 PSTPIP2Q9H939 334 aa17.57■□□□□ 0.4
C9orf50-202ENST00000619117 CCDC196A0A1B0GTZ2 297 aa17.56■□□□□ 0.4
C9orf50-202ENST00000619117 hCG_1984214I3L0E3 225 aa17.56■□□□□ 0.4
C9orf50-202ENST00000619117 METAP2P50579 478 aaKnown RBP eCLIP17.56■□□□□ 0.4
C9orf50-202ENST00000619117 MRPS9P82933 396 aaKnown RBP17.56■□□□□ 0.4
C9orf50-202ENST00000619117 FPGSQ05932 587 aa17.56■□□□□ 0.4
C9orf50-202ENST00000619117 PCNX4Q63HM2 1172 aa17.56■□□□□ 0.4
C9orf50-202ENST00000619117 WWC2Q6AWC2 1192 aa17.56■□□□□ 0.4
C9orf50-202ENST00000619117 XRRA1Q6P2D8 792 aa17.56■□□□□ 0.4
C9orf50-202ENST00000619117 ZNF713Q8N859 430 aaPredicted RBP17.56■□□□□ 0.4
C9orf50-202ENST00000619117 GPKOWQ92917 476 aaPredicted RBP eCLIP17.56■□□□□ 0.4
C9orf50-202ENST00000619117 ALDH8A1Q9H2A2 487 aaPredicted RBP17.56■□□□□ 0.4
C9orf50-202ENST00000619117 SCN10AQ9Y5Y9 1956 aa17.56■□□□□ 0.4
C9orf50-202ENST00000619117 B4GALT4O60513 344 aa17.55■□□□□ 0.4
C9orf50-202ENST00000619117 HOXD8P13378 290 aaPredicted RBP17.55■□□□□ 0.4
C9orf50-202ENST00000619117 UBA1P22314 1058 aaKnown RBP17.55■□□□□ 0.4
C9orf50-202ENST00000619117 LAMC2Q13753 1193 aa17.55■□□□□ 0.4
C9orf50-202ENST00000619117 GNPTABQ3T906 1256 aa17.55■□□□□ 0.4
C9orf50-202ENST00000619117 MFSD5Q6N075 450 aa17.55■□□□□ 0.4
C9orf50-202ENST00000619117 PPTC7Q8NI37 304 aa17.55■□□□□ 0.4
C9orf50-202ENST00000619117 TM6SF1Q9BZW5 370 aa17.55■□□□□ 0.4
C9orf50-202ENST00000619117 ZSWIM6Q9HCJ5 1215 aa17.55■□□□□ 0.4
C9orf50-202ENST00000619117 NAP1L2Q9ULW6 460 aaPredicted RBP17.55■□□□□ 0.4
C9orf50-202ENST00000619117 ICAM3P32942 547 aa17.54■□□□□ 0.4
C9orf50-202ENST00000619117 EVCP57679 992 aa17.54■□□□□ 0.4
C9orf50-202ENST00000619117 PTPN11Q06124 597 aaPredicted RBP17.54■□□□□ 0.4
C9orf50-202ENST00000619117 DGKDQ16760 1214 aa17.54■□□□□ 0.4
C9orf50-202ENST00000619117 NBPF20Q3BBV1 942 aa17.54■□□□□ 0.4
C9orf50-202ENST00000619117 CELF3Q5SZQ8 465 aaKnown RBP17.54■□□□□ 0.4
C9orf50-202ENST00000619117 GPR153Q6NV75 609 aa17.54■□□□□ 0.4
C9orf50-202ENST00000619117 NFRKBQ6P4R8 1299 aa17.54■□□□□ 0.4
C9orf50-202ENST00000619117 RUFY3Q7L099 469 aa17.54■□□□□ 0.4
C9orf50-202ENST00000619117 DHX37Q8IY37 1157 aaKnown RBP17.54■□□□□ 0.4
C9orf50-202ENST00000619117 LRCH3Q96II8 777 aa17.54■□□□□ 0.4
C9orf50-202ENST00000619117 TRPV6Q9H1D0 765 aa17.54■□□□□ 0.4
C9orf50-202ENST00000619117 V9GY48 417 aaPredicted RBP17.54■□□□□ 0.4
C9orf50-202ENST00000619117 LAMA3Q16787 3333 aa17.54■□□□□ 0.4
C9orf50-202ENST00000619117 STXBP3O00186 592 aa17.53■□□□□ 0.4
C9orf50-202ENST00000619117 FIBPO43427 364 aa17.53■□□□□ 0.4
C9orf50-202ENST00000619117 GGPS1O95749 300 aa17.53■□□□□ 0.4
C9orf50-202ENST00000619117 SUPT20HL2P0C7V6 817 aa17.53■□□□□ 0.4
C9orf50-202ENST00000619117 ADD1P35611 737 aaKnown RBP17.53■□□□□ 0.4
C9orf50-202ENST00000619117 EPHB4P54760 987 aa17.53■□□□□ 0.4
C9orf50-202ENST00000619117 NAPAP54920 295 aa17.53■□□□□ 0.4
C9orf50-202ENST00000619117 SP2Q02086 613 aa17.53■□□□□ 0.4
C9orf50-202ENST00000619117 SHHQ15465 462 aa17.53■□□□□ 0.4
C9orf50-202ENST00000619117 UBE2SQ16763 222 aa17.53■□□□□ 0.4
C9orf50-202ENST00000619117 C9orf50Q5SZB4 431 aa17.53■□□□□ 0.4
C9orf50-202ENST00000619117 MYSM1Q5VVJ2 828 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms