RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 USO1O60763 962 aaKnown RBP7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 DDAH1O94760 285 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 VIL1P09327 827 aaKnown RBP7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 TRIM21P19474 475 aaKnown RBP7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 TROAPQ12815 778 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 NR5A1Q13285 461 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 NEDD1Q8NHV4 660 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 CEP95Q96GE4 821 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 RPGRIP1Q96KN7 1286 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 FAM161BQ96MY7 647 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 MAP3K14Q99558 947 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 TMEM47Q9BQJ4 181 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 MRIQ9BWK5 157 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 DHX36Q9H2U1 1008 aaKnown RBP7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 HAUS4Q9H6D7 363 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 INTS13Q9NVM9 706 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 SAR1BQ9Y6B6 198 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 DUOX1Q9NRD9 1551 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 GOLGA6CA6NDK9 693 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 CCDC85CA6NKD9 419 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 GOLGA6DP0CG33 693 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 GOLGA8HP0CJ92 632 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 AKR1B1P15121 316 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 ZNF18P17022 549 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 DNAJA1P31689 397 aaKnown RBP7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 GUCY1A2P33402 732 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 ZNF211Q13398 564 aaPredicted RBP7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 NTRK3Q16288 839 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 TMEM139Q8IV31 216 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 FOXP4Q8IVH2 680 aaPredicted RBP7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 SMYD4Q8IYR2 804 aaPredicted RBP7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 TRIM47Q96LD4 638 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 MKNK1Q9BUB5 465 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 HSD3B7Q9H2F3 369 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 GOLGA6AQ9NYA3 693 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 MYH2Q9UKX2 1941 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 DDTLA6NHG4 134 aaPredicted RBP7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 NLRP5P59047 1200 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 MTMR3Q13615 1198 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 ZNF174Q15697 407 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 RASGRP2Q7LDG7 609 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 PLPP6Q8IY26 295 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 LRRC47Q8N1G4 583 aaKnown RBP7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 STAMQ92783 540 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 CSRNP1Q96S65 589 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 VPS33BQ9H267 617 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 SWAP70Q9UH65 585 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 FBXO2Q9UK22 296 aaPredicted RBP7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 EPN1Q9Y6I3 576 aaPredicted RBP7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 CCDC88AQ3V6T2 1871 aa7.77□□□□□ -1.17
SRGAP3-213ENST00000618999 FAM237AA0A1B0GTK4 181 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 EIF3CLB5ME19 914 aaKnown RBP7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 NFKBIEO00221 500 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 MAP2K7O14733 419 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 PTGER2P43116 358 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 GNAQP50148 359 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 CERKLQ49MI3 558 aaPredicted RBP7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 NCAPH2Q6IBW4 605 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 RCSD1Q6JBY9 416 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 CLEC10AQ8IUN9 316 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 MSANTD4Q8NCY6 345 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 OR8K1Q8NGG5 319 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 SYMPKQ92797 1274 aaKnown RBP7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 GDAP1L1Q96MZ0 367 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 PNKPQ96T60 521 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 EIF3CQ99613 913 aaKnown RBP7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 VPS54Q9P1Q0 977 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 L1RE1Q9UN81 338 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 CHD4Q14839 1912 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 GOLGA6BA6NDN3 693 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 KCNJ18B7U540 433 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 OPA1O60313 960 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 PPFIA4O75335 1185 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 PAFAH1B1P43034 410 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 NT5C2P49902 561 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 COPB1P53618 953 aaKnown RBP7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 RCAN1P53805 252 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 KIF5AQ12840 1032 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 KCNJ12Q14500 433 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 NOC3LQ8WTT2 800 aaKnown RBP7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 NELFBQ8WX92 580 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 ANKZF1Q9H8Y5 726 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 SUGCTQ9HAC7 445 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 FAM198AQ9UFP1 575 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 SCAF8Q9UPN6 1271 aaKnown RBP7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 PSMA7O14818 248 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 N4BP1O75113 896 aaKnown RBP7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 PARP1P09874 1014 aaKnown RBP7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 IDEP14735 1019 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 STAT6P42226 847 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 MNAT1P51948 309 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 FKBP15Q5T1M5 1219 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 USP17L2Q6R6M4 530 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 EFCAB13Q8IY85 973 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 AGBL3Q8NEM8 1001 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 JAKMIP2Q96AA8 810 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 RNF26Q9BY78 433 aaPredicted RBP7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 BLZF1Q9H2G9 400 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 ABHD10Q9NUJ1 306 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 ADD3Q9UEY8 706 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms