RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 INPP5BP32019 993 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 DPYDQ12882 1025 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 CEP85LQ5SZL2 805 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 SPICE1Q8N0Z3 855 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 FBXL16Q8N461 479 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 TC2NQ8N9U0 490 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 MPHOSPH6Q99547 160 aaKnown RBP15.26■□□□□ 0.03
CNOT3-210ENST00000618939 IRX2Q9BZI1 471 aaPredicted RBP15.26■□□□□ 0.03
CNOT3-210ENST00000618939 LARSQ9P2J5 1176 aaKnown RBP15.26■□□□□ 0.03
CNOT3-210ENST00000618939 IKBKGQ9Y6K9 419 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 EXOC4Q96A65 974 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 IFT74Q96LB3 600 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 SAMD15Q9P1V8 674 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 ADD3Q9UEY8 706 aaKnown RBP15.26■□□□□ 0.03
CNOT3-210ENST00000618939 HPSEQ9Y251 543 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 MSL1Q68DK7 614 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 PLCD4Q9BRC7 762 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 DNAI2Q9GZS0 605 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 RAB17Q9H0T7 212 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 KCNK9Q9NPC2 374 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 RNF40O75150 1001 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 NR1I3Q14994 352 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 MEIS1O00470 390 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 DKC1O60832 514 aaKnown RBP eCLIP15.25■□□□□ 0.03
CNOT3-210ENST00000618939 AFPP02771 609 aaKnown RBP15.25■□□□□ 0.03
CNOT3-210ENST00000618939 HARSP12081 509 aaKnown RBP15.25■□□□□ 0.03
CNOT3-210ENST00000618939 CTNNA1P35221 906 aaKnown RBP15.25■□□□□ 0.03
CNOT3-210ENST00000618939 CLUL1Q15846 466 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 KRT12Q99456 494 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 DBNDD1Q9H9R9 158 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 LIMA1Q9UHB6 759 aaKnown RBP15.25■□□□□ 0.03
CNOT3-210ENST00000618939 CEP83Q9Y592 693 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 PLEKHG2Q9H7P9 1386 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 LRCH2Q5VUJ6 765 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 FAM133AQ8N9E0 248 aa15.25■□□□□ 0.03
CNOT3-210ENST00000618939 ARHGEF1Q92888 912 aaKnown RBP15.25■□□□□ 0.03
CNOT3-210ENST00000618939 PVALEFA0A1B0GWK0 134 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 TCP10L2B9ZVM9 353 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 SBK1Q52WX2 424 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 ODR4Q5SWX8 454 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 NEDD1Q8NHV4 660 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 IWS1Q96ST2 819 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 CAPS2Q9BXY5 557 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 COA1Q9GZY4 146 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 C3P01024 1663 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 K7ENM7 598 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 GDF11O95390 407 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 ATP1A2P50993 1020 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 EPHB4P54760 987 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 KCNB1Q14721 858 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 ELOA2Q8IYF1 753 aaPredicted RBP15.24■□□□□ 0.03
CNOT3-210ENST00000618939 CCDC105Q8IYK2 499 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 BCAS4Q8TDM0 211 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 MAP3K14Q99558 947 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 DHX36Q9H2U1 1008 aaKnown RBP15.24■□□□□ 0.03
CNOT3-210ENST00000618939 MON2Q7Z3U7 1717 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 POTEDQ86YR6 584 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 ZNF710Q8N1W2 664 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 ANO3Q9BYT9 981 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 CCSER1Q9C0I3 900 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 TMEM260Q9NX78 707 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 ASIC3Q9UHC3 531 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 A0A1W2PQC6 194 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 HEXIM1O94992 359 aaKnown RBP15.24■□□□□ 0.03
CNOT3-210ENST00000618939 FTCDO95954 541 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 APBA3O96018 575 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 SERPING1P05155 500 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 VIMP08670 466 aaKnown RBP15.24■□□□□ 0.03
CNOT3-210ENST00000618939 CDC37Q16543 378 aaPredicted RBP15.24■□□□□ 0.03
CNOT3-210ENST00000618939 SMIM5Q71RC9 77 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 PPM1EQ8WY54 764 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 TEKT3Q9BXF9 490 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 RNF14Q9UBS8 474 aa15.24■□□□□ 0.03
CNOT3-210ENST00000618939 SEMA3FQ13275 785 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 ITPK1Q13572 414 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 COL9A3Q14050 684 aaPredicted RBP15.23■□□□□ 0.03
CNOT3-210ENST00000618939 PCDHA6Q9UN73 950 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 PCDHA8Q9Y5H6 950 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 CNTNAP5Q8WYK1 1306 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 FXR1P51114 621 aaKnown RBP eCLIP15.23■□□□□ 0.03
CNOT3-210ENST00000618939 GTF2A1P52655 376 aaPredicted RBP15.23■□□□□ 0.03
CNOT3-210ENST00000618939 TROAPQ12815 778 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 NTRK3Q16288 839 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 PPP2R5EQ16537 467 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 ZNF365Q70YC5 407 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 CSRNP1Q96S65 589 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 PI4KBQ9UBF8 816 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 ANAPC4Q9UJX5 808 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.23■□□□□ 0.03
CNOT3-210ENST00000618939 SRGAP2O75044 1071 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 BMP3P12645 472 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 FERP16591 822 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 FGFR2P21802 821 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 ORC2Q13416 577 aaPredicted RBP15.23■□□□□ 0.03
CNOT3-210ENST00000618939 CROCCP2Q86T23 111 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 FAM186BQ8IYM0 893 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 EPB41L5Q9HCM4 733 aa15.23■□□□□ 0.03
CNOT3-210ENST00000618939 SALL1Q9NSC2 1324 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 CLIC2O15247 247 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms