RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 TBC1D8O95759 1140 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 IDEP14735 1019 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 HHIPL2Q6UWX4 724 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 PSMD1Q99460 953 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 ANKZF1Q9H8Y5 726 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 STK17AQ9UEE5 414 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 G3V3G9 751 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 EPHB6O15197 1021 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 MEA1Q16626 185 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 TMEM119Q4V9L6 283 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 DCAF8Q5TAQ9 597 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 DDX12PQ92771 950 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 CUL5Q93034 780 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 MTMR8Q96EF0 704 aa18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 PCMTD1Q96MG8 357 aaPredicted RBP18.74■□□□□ 0.59
SEMA3B-213ENST00000618865 MMP10P09238 476 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 SNAP25P60880 206 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 PDIA5Q14554 519 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 SH3BP5LQ7L8J4 393 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 ZSCAN29Q8IWY8 852 aaPredicted RBP18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 PSTPIP2Q9H939 334 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 ENC1O14682 589 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 HLA-DOAP06340 250 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 AMPD2Q01433 879 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 COBLL1Q53SF7 1204 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 KRT79Q5XKE5 535 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 PPP4R3AQ6IN85 833 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 ZNF219Q9P2Y4 722 aaPredicted RBP18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 HDAC6Q9UBN7 1215 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 MYO3BQ8WXR4 1341 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 EEF2P13639 858 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 TAL1P17542 331 aaPredicted RBP18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 GABPB1Q06547 395 aaPredicted RBP18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 NCAPH2Q6IBW4 605 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 PPP1R18Q6NYC8 613 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 PNKPQ96T60 521 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 FGFBP2Q9BYJ0 223 aa18.73■□□□□ 0.59
SEMA3B-213ENST00000618865 PLEKP08567 350 aaPredicted RBP18.72■□□□□ 0.59
SEMA3B-213ENST00000618865 QRICH1Q2TAL8 776 aa18.72■□□□□ 0.59
SEMA3B-213ENST00000618865 P2RX7Q99572 595 aaKnown RBP18.72■□□□□ 0.59
SEMA3B-213ENST00000618865 LACRTQ9GZZ8 138 aa18.72■□□□□ 0.59
SEMA3B-213ENST00000618865 FAM198AQ9UFP1 575 aa18.72■□□□□ 0.59
SEMA3B-213ENST00000618865 ATF5Q9Y2D1 282 aaPredicted RBP18.72■□□□□ 0.59
SEMA3B-213ENST00000618865 GPATCH4Q5T3I0 446 aaKnown RBP18.72■□□□□ 0.59
SEMA3B-213ENST00000618865 TAF3Q5VWG9 929 aa18.72■□□□□ 0.59
SEMA3B-213ENST00000618865 SIAH1Q8IUQ4 282 aa18.72■□□□□ 0.59
SEMA3B-213ENST00000618865 FAM114A1Q8IWE2 563 aa18.72■□□□□ 0.59
SEMA3B-213ENST00000618865 NHEJ1Q9H9Q4 299 aaPredicted RBP18.72■□□□□ 0.59
SEMA3B-213ENST00000618865 PVALEFA0A1B0GWK0 134 aa18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 CYP27A1Q02318 531 aa18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 EHHADHQ08426 723 aa18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 TERF2Q15554 542 aa18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 NLGN1Q8N2Q7 840 aa18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 DUSP10Q9Y6W6 482 aa18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 C10orf71Q711Q0 1435 aa18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 MRPL12P52815 198 aaKnown RBP18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 ZBED6P86452 979 aa18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 CEP112Q8N8E3 955 aa18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 AKT1S1Q96B36 256 aa18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 DNAJC19Q96DA6 116 aa18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 ERGIC2Q96RQ1 377 aa18.71■□□□□ 0.59
SEMA3B-213ENST00000618865 ALDH1B1P30837 517 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 TSR1Q2NL82 804 aaKnown RBP18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 CCDC122Q5T0U0 273 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 CCDC155Q8N6L0 562 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 ZDHHC15Q96MV8 337 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 RAB34Q9BZG1 259 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 MYO1AQ9UBC5 1043 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 ZNF646O15015 1829 aaPredicted RBP18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 NPHP3-ACAD11A0A0J9YXS1 232 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 E9PMD0 336 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 RBM5P52756 815 aaKnown RBP eCLIP18.7■□□□□ 0.583e-6■■□□□ 12.7
SEMA3B-213ENST00000618865 CACNB1Q02641 598 aaPredicted RBP18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 SEPT2Q15019 361 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 VWA3BQ502W6 1294 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 LRRC55Q6ZSA7 311 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 NOA1Q8NC60 698 aaKnown RBP18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 FAM207AQ9NSI2 230 aaPredicted RBP18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 TBC1D7Q9P0N9 293 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 SIK3Q9Y2K2 1263 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 ZNF263O14978 683 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 ATP1A1P05023 1023 aaKnown RBP18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 RHOXF2BP0C7M4 288 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 STAT3P40763 770 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 KRT26Q7Z3Y9 468 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 GUF1Q8N442 669 aaKnown RBP18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 MASTLQ96GX5 879 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 RHOXF2Q9BQY4 288 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 NUP58Q9BVL2 599 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 EHD4Q9H223 541 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 NDST4Q9H3R1 872 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 MYO6Q9UM54 1294 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 PCDHA12Q9UN75 941 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 PCDHA1Q9Y5I3 950 aa18.7■□□□□ 0.58
SEMA3B-213ENST00000618865 MARCH6O60337 910 aa18.69■□□□□ 0.58
SEMA3B-213ENST00000618865 SRGAP2O75044 1071 aa18.69■□□□□ 0.58
SEMA3B-213ENST00000618865 GDF11O95390 407 aa18.69■□□□□ 0.58
SEMA3B-213ENST00000618865 SSBP05455 408 aaKnown RBP eCLIP18.69■□□□□ 0.58
SEMA3B-213ENST00000618865 PPP1R2P41236 205 aa18.69■□□□□ 0.58
SEMA3B-213ENST00000618865 JAG1P78504 1218 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms