RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 GLIS3Q8NEA6 775 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 MTMR8Q96EF0 704 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 MTMR9Q96QG7 549 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 EYA3Q99504 573 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 NYXQ9GZU5 481 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 STIM2Q9P246 746 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 STK17AQ9UEE5 414 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 SRP68Q9UHB9 627 aaKnown RBP22.6■■□□□ 1.21
NEK3-208ENST00000618534 ABCB11O95342 1321 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 IRAK1P51617 712 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 CALCRLQ16602 461 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 PDXDC1Q6P996 788 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 WDR66Q8TBY9 1149 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 PJA2O43164 708 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 SLC37A4O43826 429 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 SLC1A4P43007 532 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 RASSF7Q02833 373 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 DNAJC21Q5F1R6 531 aaKnown RBP22.59■■□□□ 1.21
NEK3-208ENST00000618534 CDK5RAP3Q96JB5 506 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 SH3GL2Q99962 352 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 TLR10Q9BXR5 811 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 EHD4Q9H223 541 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 SBF2Q86WG5 1849 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 BUB1O43683 1085 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 FGFR1OPO95684 399 aaKnown RBP22.59■■□□□ 1.21
NEK3-208ENST00000618534 CDK8P49336 464 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 EPHB4P54760 987 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 LRRC63Q05C16 580 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 LRRC41Q15345 812 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 ASTE1Q2TB18 679 aaPredicted RBP22.59■■□□□ 1.21
NEK3-208ENST00000618534 SETDB2Q96T68 719 aa22.59■■□□□ 1.21
NEK3-208ENST00000618534 RBM12Q9NTZ6 932 aaKnown RBP22.59■■□□□ 1.21
NEK3-208ENST00000618534 POTEMA6NI47 508 aa22.58■■□□□ 1.21
NEK3-208ENST00000618534 PPP4CP60510 307 aa22.58■■□□□ 1.21
NEK3-208ENST00000618534 GSTO1P78417 241 aa22.58■■□□□ 1.21
NEK3-208ENST00000618534 PPFIA1Q13136 1202 aa22.58■■□□□ 1.21
NEK3-208ENST00000618534 UBA5Q9GZZ9 404 aa22.58■■□□□ 1.21
NEK3-208ENST00000618534 THRAP3Q9Y2W1 955 aaKnown RBP22.58■■□□□ 1.21
NEK3-208ENST00000618534 DDX60LQ5H9U9 1706 aaKnown RBP22.58■■□□□ 1.2
NEK3-208ENST00000618534 TDP2O95551 362 aa22.58■■□□□ 1.2
NEK3-208ENST00000618534 TM4SF1P30408 202 aa22.58■■□□□ 1.2
NEK3-208ENST00000618534 PAFAH1B1P43034 410 aa22.58■■□□□ 1.2
NEK3-208ENST00000618534 ORC2Q13416 577 aaPredicted RBP22.58■■□□□ 1.2
NEK3-208ENST00000618534 KLHDC7AQ5VTJ3 777 aa22.58■■□□□ 1.2
NEK3-208ENST00000618534 HGSNATQ68CP4 663 aa22.58■■□□□ 1.2
NEK3-208ENST00000618534 CACNA2D4Q7Z3S7 1137 aa22.58■■□□□ 1.2
NEK3-208ENST00000618534 TMC4Q7Z404 712 aa22.58■■□□□ 1.2
NEK3-208ENST00000618534 PACS2Q86VP3 889 aa22.58■■□□□ 1.2
NEK3-208ENST00000618534 NUDT12Q9BQG2 462 aa22.58■■□□□ 1.2
NEK3-208ENST00000618534 TANGO6Q9C0B7 1094 aa22.58■■□□□ 1.2
NEK3-208ENST00000618534 GOLGA8KD6RF30 607 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 FXR2P51116 673 aaKnown RBP eCLIP22.57■■□□□ 1.2
NEK3-208ENST00000618534 C8orf74Q6P047 294 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 KCNK18Q7Z418 384 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 RAD54LQ92698 747 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 MS4A14Q96JA4 679 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 KCNMA1Q12791 1236 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 TDRD12Q587J7 1177 aaKnown RBP22.57■■□□□ 1.2
NEK3-208ENST00000618534 EMBQ6PCB8 327 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 NEDD1Q8NHV4 660 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 DDX12PQ92771 950 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 CEP95Q96GE4 821 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 NOX5Q96PH1 765 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 CAPS2Q9BXY5 557 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 ANKIB1Q9P2G1 1089 aa22.57■■□□□ 1.2
NEK3-208ENST00000618534 EDIL3O43854 480 aa22.56■■□□□ 1.2
NEK3-208ENST00000618534 NOP2P46087 812 aaKnown RBP22.56■■□□□ 1.2
NEK3-208ENST00000618534 CCT5P48643 541 aa22.56■■□□□ 1.2
NEK3-208ENST00000618534 TMEM266Q2M3C6 531 aa22.56■■□□□ 1.2
NEK3-208ENST00000618534 TTC31Q49AM3 519 aaPredicted RBP22.56■■□□□ 1.2
NEK3-208ENST00000618534 C16orf86Q6ZW13 317 aa22.56■■□□□ 1.2
NEK3-208ENST00000618534 SNX29Q8TEQ0 813 aa22.56■■□□□ 1.2
NEK3-208ENST00000618534 RTFDC1Q9BY42 306 aaPredicted RBP22.56■■□□□ 1.2
NEK3-208ENST00000618534 ZNF287Q9HBT7 754 aa22.56■■□□□ 1.2
NEK3-208ENST00000618534 NLRC4Q9NPP4 1024 aa22.56■■□□□ 1.2
NEK3-208ENST00000618534 GRIN2DO15399 1336 aa22.56■■□□□ 1.2
NEK3-208ENST00000618534 USP17L5A8MUK1 530 aa22.56■■□□□ 1.2
NEK3-208ENST00000618534 PPM1EQ8WY54 764 aa22.56■■□□□ 1.2
NEK3-208ENST00000618534 ARL8AQ96BM9 186 aa22.56■■□□□ 1.2
NEK3-208ENST00000618534 GPR101Q96P66 508 aaPredicted RBP22.56■■□□□ 1.2
NEK3-208ENST00000618534 RABEP2Q9H5N1 569 aa22.56■■□□□ 1.2
NEK3-208ENST00000618534 SSU72P8A0A1W2PR75 194 aa22.55■■□□□ 1.2
NEK3-208ENST00000618534 ESYT2A0FGR8 921 aa22.55■■□□□ 1.2
NEK3-208ENST00000618534 OPA1O60313 960 aa22.55■■□□□ 1.2
NEK3-208ENST00000618534 NAP1L1P55209 391 aaKnown RBP22.55■■□□□ 1.2
NEK3-208ENST00000618534 EHHADHQ08426 723 aa22.55■■□□□ 1.2
NEK3-208ENST00000618534 TTMPQ5BVD1 217 aa22.55■■□□□ 1.2
NEK3-208ENST00000618534 CAVIN3Q969G5 261 aa22.55■■□□□ 1.2
NEK3-208ENST00000618534 CDK5RAP2Q96SN8 1893 aa22.55■■□□□ 1.2
NEK3-208ENST00000618534 TNFRSF8P28908 595 aa22.55■■□□□ 1.2
NEK3-208ENST00000618534 GNGT1P63211 74 aa22.55■■□□□ 1.2
NEK3-208ENST00000618534 COA7Q96BR5 231 aa22.55■■□□□ 1.2
NEK3-208ENST00000618534 TSG101Q99816 390 aa22.55■■□□□ 1.2
NEK3-208ENST00000618534 FRMPD2Q68DX3 1309 aaPredicted RBP22.54■■□□□ 1.2
NEK3-208ENST00000618534 COL24A1Q17RW2 1714 aa22.54■■□□□ 1.2
NEK3-208ENST00000618534 BTDP43251 543 aa22.54■■□□□ 1.2
NEK3-208ENST00000618534 TTC19Q6DKK2 380 aaPredicted RBP22.54■■□□□ 1.2
NEK3-208ENST00000618534 GBP6Q6ZN66 633 aa22.54■■□□□ 1.2
NEK3-208ENST00000618534 EFCC1Q9HA90 598 aa22.54■■□□□ 1.2
NEK3-208ENST00000618534 NARFQ9UHQ1 456 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms