RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 BRWD3Q6RI45 1802 aa11.82□□□□□ -0.52
CPEB1-215ENST00000617958 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
CPEB1-215ENST00000617958 MACROD2A1Z1Q3 448 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 NEURL1BA8MQ27 555 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 ONECUT3O60422 494 aaPredicted RBP11.81□□□□□ -0.52
CPEB1-215ENST00000617958 WFS1O76024 890 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 PARP1P09874 1014 aaKnown RBP11.81□□□□□ -0.52
CPEB1-215ENST00000617958 CNGA1P29973 690 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 ZNF131P52739 623 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 LBRQ14739 615 aaKnown RBP11.81□□□□□ -0.52
CPEB1-215ENST00000617958 SGSM1Q2NKQ1 1148 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 SPDYCQ5MJ68 293 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 RNF10Q8N5U6 811 aaKnown RBP11.81□□□□□ -0.52
CPEB1-215ENST00000617958 YIPF3Q9GZM5 350 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 EPB41L5Q9HCM4 733 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.81□□□□□ -0.52
CPEB1-215ENST00000617958 UBR2Q8IWV8 1755 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 F8W031 263 aaPredicted RBP11.81□□□□□ -0.52
CPEB1-215ENST00000617958 FGAP02671 866 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 ATP4AP20648 1035 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 HPDP32754 393 aaPredicted RBP11.81□□□□□ -0.52
CPEB1-215ENST00000617958 MAGEA8P43361 318 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 SSRP1Q08945 709 aaKnown RBP11.81□□□□□ -0.52
CPEB1-215ENST00000617958 NEXNQ0ZGT2 675 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 ERMARDQ5T6L9 678 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 PIGWQ7Z7B1 504 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 DIS3L2Q8IYB7 885 aaKnown RBP11.81□□□□□ -0.52
CPEB1-215ENST00000617958 ISCUQ9H1K1 167 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 CAPN6Q9Y6Q1 641 aa11.81□□□□□ -0.52
CPEB1-215ENST00000617958 RASSF10A6NK89 507 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 BHMG1C9JSJ3 638 aaPredicted RBP11.8□□□□□ -0.52
CPEB1-215ENST00000617958 RANBP6O60518 1105 aaKnown RBP11.8□□□□□ -0.52
CPEB1-215ENST00000617958 PPFIA2O75334 1257 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 IFNAR1P17181 557 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 MRPS35P82673 323 aaKnown RBP11.8□□□□□ -0.52
CPEB1-215ENST00000617958 CTDSPL2Q05D32 466 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 LAMB3Q13751 1172 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 NUP133Q8WUM0 1156 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 NELFBQ8WX92 580 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 EZH1Q92800 747 aaPredicted RBP11.8□□□□□ -0.52
CPEB1-215ENST00000617958 BICD1Q96G01 975 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 CTNNAL1Q9UBT7 734 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 TFR2Q9UP52 801 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.8□□□□□ -0.52
CPEB1-215ENST00000617958 THSD7AQ9UPZ6 1657 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 GPR75-ASB3A0A0A6YYF3 556 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 E7ENQ6 273 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 CES2O00748 559 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 ZNF213O14771 459 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 ZBTB43O43298 467 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 GTPBP6O43824 516 aaPredicted RBP11.8□□□□□ -0.52
CPEB1-215ENST00000617958 FLOT1O75955 427 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 SETSIPP0DME0 302 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 IMPDH2P12268 514 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 NQO1P15559 274 aaKnown RBP11.8□□□□□ -0.52
CPEB1-215ENST00000617958 GUCY2DQ02846 1103 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 RRAGBQ5VZM2 374 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 IRF2BP1Q8IU81 584 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 CASKIN2Q8WXE0 1202 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 FAM129AQ9BZQ8 928 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 SRP68Q9UHB9 627 aaKnown RBP11.8□□□□□ -0.52
CPEB1-215ENST00000617958 ASB3Q9Y575 518 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 DUSP10Q9Y6W6 482 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 MYH13Q9UKX3 1938 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 PAPPAQ13219 1627 aa11.8□□□□□ -0.52
CPEB1-215ENST00000617958 A0A087X0B3 334 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 BTBD18B2RXH4 712 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 DIAPH2O60879 1101 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 KIF5BP33176 963 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 AFMP43652 599 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 ZNF844Q08AG5 666 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 PSMD2Q13200 908 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 SNX1Q13596 522 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 CCDC96Q2M329 555 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 NFRKBQ6P4R8 1299 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 RBM12BQ8IXT5 1001 aaKnown RBP11.79□□□□□ -0.52
CPEB1-215ENST00000617958 GBP7Q8N8V2 638 aaPredicted RBP11.79□□□□□ -0.52
CPEB1-215ENST00000617958 OSBP2Q969R2 916 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 CCDC134Q9H6E4 229 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 LRWD1Q9UFC0 647 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 PCDHB6Q9Y5E3 794 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 SPDYE3A6NKU9 549 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 STARD3NLO95772 234 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 CLTAP09496 248 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 HSD17B3P37058 310 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 LIFRP42702 1097 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 BICDL1Q6ZP65 573 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 USP49Q70CQ1 688 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 SPATA21Q7Z572 469 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 SMYD4Q8IYR2 804 aaPredicted RBP11.79□□□□□ -0.52
CPEB1-215ENST00000617958 PHKBQ93100 1093 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 FAM89AQ96GI7 184 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 CCDC42Q96M95 316 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 ZNF317Q96PQ6 595 aaPredicted RBP11.79□□□□□ -0.52
CPEB1-215ENST00000617958 XPO6Q96QU8 1125 aaKnown RBP11.79□□□□□ -0.52
CPEB1-215ENST00000617958 TLR10Q9BXR5 811 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 IFIH1Q9BYX4 1025 aaKnown RBP11.79□□□□□ -0.52
CPEB1-215ENST00000617958 FAM217BQ9NTX9 383 aaPredicted RBP11.79□□□□□ -0.52
CPEB1-215ENST00000617958 L3MBTL1Q9Y468 752 aa11.79□□□□□ -0.52
CPEB1-215ENST00000617958 PCDHA13Q9Y5I0 950 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms