RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 KCNV1Q6PIU1 500 aa29.13■■■□□ 2.25
VEGFA-228ENST00000617771 SYNE3Q6ZMZ3 975 aa29.13■■■□□ 2.25
VEGFA-228ENST00000617771 SGMS1Q86VZ5 419 aa29.13■■■□□ 2.25
VEGFA-228ENST00000617771 PLEKHA8P1O95397 391 aa29.12■■■□□ 2.25
VEGFA-228ENST00000617771 MMP3P08254 477 aa29.12■■■□□ 2.25
VEGFA-228ENST00000617771 RXRAP19793 462 aa29.12■■■□□ 2.25
VEGFA-228ENST00000617771 KRT32Q14532 448 aa29.12■■■□□ 2.25
VEGFA-228ENST00000617771 NBPF20Q3BBV1 942 aa29.12■■■□□ 2.25
VEGFA-228ENST00000617771 TSGA10IPQ3SY00 556 aa29.12■■■□□ 2.25
VEGFA-228ENST00000617771 FAM47CQ5HY64 1035 aa29.12■■■□□ 2.25
VEGFA-228ENST00000617771 NFRKBQ6P4R8 1299 aa29.12■■■□□ 2.25
VEGFA-228ENST00000617771 VSIG10LQ86VR7 867 aa29.12■■■□□ 2.25
VEGFA-228ENST00000617771 SRBD1Q8N5C6 995 aaKnown RBP29.12■■■□□ 2.25
VEGFA-228ENST00000617771 NOC4LQ9BVI4 516 aaKnown RBP29.12■■■□□ 2.25
VEGFA-228ENST00000617771 MTMR10Q9NXD2 777 aa29.12■■■□□ 2.25
VEGFA-228ENST00000617771 PTPN11Q06124 597 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-228ENST00000617771 LAMC2Q13753 1193 aa29.11■■■□□ 2.25
VEGFA-228ENST00000617771 PSRC1Q6PGN9 363 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-228ENST00000617771 CUL5Q93034 780 aa29.11■■■□□ 2.25
VEGFA-228ENST00000617771 EMID1Q96A84 441 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-228ENST00000617771 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.11■■■□□ 2.251e-12■■■□□ 14.7
VEGFA-228ENST00000617771 KIAA1217Q5T5P2 1943 aa29.11■■■□□ 2.25
VEGFA-228ENST00000617771 CASTP20810 708 aaKnown RBP29.1■■■□□ 2.25
VEGFA-228ENST00000617771 ZNF697Q5TEC3 545 aa29.1■■■□□ 2.25
VEGFA-228ENST00000617771 FANCBQ8NB91 859 aa29.1■■■□□ 2.25
VEGFA-228ENST00000617771 TRMT13Q9NUP7 481 aaKnown RBP29.1■■■□□ 2.25
VEGFA-228ENST00000617771 BAZ2BQ9UIF8 2168 aaKnown RBP29.1■■■□□ 2.25
VEGFA-228ENST00000617771 DGKDQ16760 1214 aa29.09■■■□□ 2.25
VEGFA-228ENST00000617771 TMEM240Q5SV17 173 aa29.09■■■□□ 2.25
VEGFA-228ENST00000617771 DHX32Q7L7V1 743 aaKnown RBP29.09■■■□□ 2.25
VEGFA-228ENST00000617771 MICU3Q86XE3 530 aa29.09■■■□□ 2.25
VEGFA-228ENST00000617771 DHX37Q8IY37 1157 aaKnown RBP29.09■■■□□ 2.25
VEGFA-228ENST00000617771 IL31RAQ8NI17 732 aa29.09■■■□□ 2.25
VEGFA-228ENST00000617771 IL23AQ9NPF7 189 aa29.09■■■□□ 2.25
VEGFA-228ENST00000617771 RGS20O76081 388 aa29.08■■■□□ 2.25
VEGFA-228ENST00000617771 TGFB3P10600 412 aa29.08■■■□□ 2.25
VEGFA-228ENST00000617771 TMTC3Q6ZXV5 915 aa29.08■■■□□ 2.25
VEGFA-228ENST00000617771 RAB11FIP4Q86YS3 637 aa29.08■■■□□ 2.25
VEGFA-228ENST00000617771 RASEFQ8IZ41 740 aa29.08■■■□□ 2.25
VEGFA-228ENST00000617771 CMTR1Q8N1G2 835 aaKnown RBP29.08■■■□□ 2.25
VEGFA-228ENST00000617771 PPTC7Q8NI37 304 aa29.08■■■□□ 2.25
VEGFA-228ENST00000617771 SMARCC2Q8TAQ2 1214 aa29.08■■■□□ 2.25
VEGFA-228ENST00000617771 UMODL1Q5DID0 1318 aa29.08■■■□□ 2.25
VEGFA-228ENST00000617771 SCN10AQ9Y5Y9 1956 aa29.08■■■□□ 2.25
VEGFA-228ENST00000617771 STAM2O75886 525 aa29.07■■■□□ 2.24
VEGFA-228ENST00000617771 HMGB1P09429 215 aaKnown RBP29.07■■■□□ 2.24
VEGFA-228ENST00000617771 ACRP10323 421 aa29.07■■■□□ 2.24
VEGFA-228ENST00000617771 CCL23P55773 120 aa29.07■■■□□ 2.24
VEGFA-228ENST00000617771 EXOSC10Q01780 885 aaKnown RBP29.07■■■□□ 2.24
VEGFA-228ENST00000617771 FRMPD4Q14CM0 1322 aa29.07■■■□□ 2.24
VEGFA-228ENST00000617771 C16orf59Q7L2K0 433 aa29.07■■■□□ 2.24
VEGFA-228ENST00000617771 PIK3CDO00329 1044 aa29.06■■■□□ 2.24
VEGFA-228ENST00000617771 CYP2C9P11712 490 aa29.06■■■□□ 2.24
VEGFA-228ENST00000617771 CHMP4BP1P59074 171 aa29.06■■■□□ 2.24
VEGFA-228ENST00000617771 ADCK5Q3MIX3 580 aa29.06■■■□□ 2.24
VEGFA-228ENST00000617771 GNPTABQ3T906 1256 aa29.06■■■□□ 2.24
VEGFA-228ENST00000617771 APOA5Q6Q788 366 aa29.06■■■□□ 2.24
VEGFA-228ENST00000617771 ZNF365Q70YC5 407 aa29.06■■■□□ 2.24
VEGFA-228ENST00000617771 RBM28Q9NW13 759 aaKnown RBP29.06■■■□□ 2.24
VEGFA-228ENST00000617771 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-228ENST00000617771 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-228ENST00000617771 CELF3Q5SZQ8 465 aaKnown RBP29.05■■■□□ 2.24
VEGFA-228ENST00000617771 CCDC82Q8N4S0 544 aa29.05■■■□□ 2.24
VEGFA-228ENST00000617771 KATNAL1Q9BW62 490 aa29.05■■■□□ 2.24
VEGFA-228ENST00000617771 WNT8AQ9H1J5 351 aa29.05■■■□□ 2.24
VEGFA-228ENST00000617771 MTIF3Q9H2K0 278 aaKnown RBP29.05■■■□□ 2.24
VEGFA-228ENST00000617771 NOD1Q9Y239 953 aa29.05■■■□□ 2.24
VEGFA-228ENST00000617771 STXBP5LQ9Y2K9 1186 aa29.05■■■□□ 2.24
VEGFA-228ENST00000617771 GGPS1O95749 300 aa29.04■■■□□ 2.24
VEGFA-228ENST00000617771 MYSM1Q5VVJ2 828 aa29.04■■■□□ 2.24
VEGFA-228ENST00000617771 USP17L6PQ6QN14 398 aa29.04■■■□□ 2.24
VEGFA-228ENST00000617771 RPUSD2Q8IZ73 545 aaKnown RBP29.04■■■□□ 2.24
VEGFA-228ENST00000617771 PPP1R13LQ8WUF5 828 aa29.04■■■□□ 2.24
VEGFA-228ENST00000617771 TCEANC2Q96MN5 208 aa29.04■■■□□ 2.24
VEGFA-228ENST00000617771 FAM161BQ96MY7 647 aa29.04■■■□□ 2.24
VEGFA-228ENST00000617771 MEIS2O14770 477 aa29.03■■■□□ 2.24
VEGFA-228ENST00000617771 ZBTB43O43298 467 aa29.03■■■□□ 2.24
VEGFA-228ENST00000617771 FGBP02675 491 aa29.03■■■□□ 2.24
VEGFA-228ENST00000617771 SESTD1Q86VW0 696 aa29.03■■■□□ 2.24
VEGFA-228ENST00000617771 KAT2BQ92831 832 aa29.03■■■□□ 2.24
VEGFA-228ENST00000617771 ZFP91Q96JP5 570 aaPredicted RBP29.03■■■□□ 2.24
VEGFA-228ENST00000617771 SPATA33Q96N06 139 aa29.03■■■□□ 2.24
VEGFA-228ENST00000617771 PSTPIP2Q9H939 334 aa29.03■■■□□ 2.24
VEGFA-228ENST00000617771 UBA1P22314 1058 aaKnown RBP29.02■■■□□ 2.24
VEGFA-228ENST00000617771 MRPS9P82933 396 aaKnown RBP29.02■■■□□ 2.24
VEGFA-228ENST00000617771 RASIP1Q5U651 963 aa29.02■■■□□ 2.24
VEGFA-228ENST00000617771 XRRA1Q6P2D8 792 aa29.02■■■□□ 2.24
VEGFA-228ENST00000617771 HERVK_113Q902F9 699 aa29.02■■■□□ 2.24
VEGFA-228ENST00000617771 INPP4AQ96PE3 977 aaPredicted RBP29.02■■■□□ 2.24
VEGFA-228ENST00000617771 MLXIPQ9HAP2 919 aa29.02■■■□□ 2.24
VEGFA-228ENST00000617771 LAMA2P24043 3122 aaKnown RBP29.01■■■□□ 2.24
VEGFA-228ENST00000617771 TMEM265A0A087WTH1 108 aa29.01■■■□□ 2.23
VEGFA-228ENST00000617771 hCG_1642624A0A1W2PR95 340 aa29.01■■■□□ 2.23
VEGFA-228ENST00000617771 PPFIA4O75335 1185 aa29.01■■■□□ 2.23
VEGFA-228ENST00000617771 REC8O95072 547 aa29.01■■■□□ 2.23
VEGFA-228ENST00000617771 FGD1P98174 961 aa29.01■■■□□ 2.23
VEGFA-228ENST00000617771 SP2Q02086 613 aa29.01■■■□□ 2.23
VEGFA-228ENST00000617771 RTN1Q16799 776 aa29.01■■■□□ 2.23
VEGFA-228ENST00000617771 KCNB2Q92953 911 aa29.01■■■□□ 2.23
VEGFA-228ENST00000617771 SCLYQ96I15 445 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms