RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 DNAJC25-GNG10A0A024R161 153 aa13.29□□□□□ -0.28
PDPN-211ENST00000617617 NR1I2O75469 434 aa13.29□□□□□ -0.28
PDPN-211ENST00000617617 SREBF2Q12772 1141 aa13.29□□□□□ -0.28
PDPN-211ENST00000617617 MORC4Q8TE76 937 aa13.29□□□□□ -0.28
PDPN-211ENST00000617617 TXNRD2Q9NNW7 524 aa13.29□□□□□ -0.28
PDPN-211ENST00000617617 ATP2B1P20020 1258 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 NDUFA8P51970 172 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 CCNA1P78396 465 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 GRIN1Q05586 938 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 PGM5Q15124 567 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 FAM43AQ8N2R8 423 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 GPRC5AQ8NFJ5 357 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 SLC5A5Q92911 643 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 CLIC6Q96NY7 704 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 MXRA8Q9BRK3 442 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 RAB34Q9BZG1 259 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 RASSF10A6NK89 507 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 FAM86B1E9PN63 330 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 MAFGO15525 162 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 FAM86B2P0C5J1 330 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 EDNRBP24530 442 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 BAATQ14032 418 aaPredicted RBP13.28□□□□□ -0.28
PDPN-211ENST00000617617 FAM110CQ1W6H9 321 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 CEP55Q53EZ4 464 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 HYIQ5T013 277 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 NSUN6Q8TEA1 469 aaKnown RBP13.28□□□□□ -0.28
PDPN-211ENST00000617617 PDCD2LQ9BRP1 358 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 KCNH3Q9ULD8 1083 aa13.28□□□□□ -0.28
PDPN-211ENST00000617617 CASP8AP2Q9UKL3 1982 aa13.27□□□□□ -0.28
PDPN-211ENST00000617617 TMEM266Q2M3C6 531 aa13.27□□□□□ -0.28
PDPN-211ENST00000617617 CAVIN1Q6NZI2 390 aaKnown RBP13.27□□□□□ -0.28
PDPN-211ENST00000617617 VSIG10LQ86VR7 867 aa13.27□□□□□ -0.28
PDPN-211ENST00000617617 FAM133AQ8N9E0 248 aa13.27□□□□□ -0.28
PDPN-211ENST00000617617 JADE2Q9NQC1 790 aa13.27□□□□□ -0.28
PDPN-211ENST00000617617 CREBZFQ9NS37 354 aa13.27□□□□□ -0.28
PDPN-211ENST00000617617 DACT1Q9NYF0 836 aa13.27□□□□□ -0.28
PDPN-211ENST00000617617 MRVI1Q9Y6F6 885 aa13.27□□□□□ -0.28
PDPN-211ENST00000617617 ZSCAN23Q3MJ62 389 aa13.27□□□□□ -0.29
PDPN-211ENST00000617617 B3GNT9Q6UX72 402 aa13.27□□□□□ -0.29
PDPN-211ENST00000617617 FCHSD1Q86WN1 690 aa13.27□□□□□ -0.29
PDPN-211ENST00000617617 IFNL1Q8IU54 200 aa13.27□□□□□ -0.29
PDPN-211ENST00000617617 TAAR1Q96RJ0 339 aa13.27□□□□□ -0.29
PDPN-211ENST00000617617 CUEDC2Q9H467 287 aa13.27□□□□□ -0.29
PDPN-211ENST00000617617 MAGEF1Q9HAY2 307 aa13.27□□□□□ -0.29
PDPN-211ENST00000617617 VWA3AA6NCI4 1184 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 ZNF202O95125 648 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 CCND2P30279 289 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 SYKP43405 635 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 SPIRE1Q08AE8 756 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 E2F4Q16254 413 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 KANK3Q6NY19 840 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 SYMPKQ92797 1274 aaKnown RBP13.26□□□□□ -0.29
PDPN-211ENST00000617617 RMDN3Q96TC7 470 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 RIT2Q99578 217 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 CFHR5Q9BXR6 569 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 NUP62CLQ9H1M0 184 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 A0A1B0GVL5 298 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 STRNO43815 780 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 ERCC3P19447 782 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 MUTP22033 750 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 PPP2R5CQ13362 524 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 Q3C1V9 767 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 SAMD1Q6SPF0 538 aaPredicted RBP13.26□□□□□ -0.29
PDPN-211ENST00000617617 ZNF467Q7Z7K2 595 aaPredicted RBP13.26□□□□□ -0.29
PDPN-211ENST00000617617 GPRASP2Q96D09 838 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 HOMER2Q9NSB8 354 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 B4DLN1 442 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 MSH4O15457 936 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 KINO60870 393 aaKnown RBP13.26□□□□□ -0.29
PDPN-211ENST00000617617 ICAM3P32942 547 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 MRPS9P82933 396 aaKnown RBP13.26□□□□□ -0.29
PDPN-211ENST00000617617 SEMA3FQ13275 785 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 PLS1Q14651 629 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 SH3RF1Q7Z6J0 888 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 ZNF784Q8NCA9 323 aaPredicted RBP13.26□□□□□ -0.29
PDPN-211ENST00000617617 ADD3Q9UEY8 706 aaKnown RBP13.26□□□□□ -0.29
PDPN-211ENST00000617617 VAV3Q9UKW4 847 aa13.26□□□□□ -0.29
PDPN-211ENST00000617617 ARID2Q68CP9 1835 aa13.25□□□□□ -0.29
PDPN-211ENST00000617617 DOCK5Q9H7D0 1870 aa13.25□□□□□ -0.29
PDPN-211ENST00000617617 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
PDPN-211ENST00000617617 ACTN4O43707 911 aaKnown RBP13.25□□□□□ -0.29
PDPN-211ENST00000617617 TXLNAP40222 546 aa13.25□□□□□ -0.29
PDPN-211ENST00000617617 ARHGEF16Q5VV41 709 aa13.25□□□□□ -0.29
PDPN-211ENST00000617617 INPP4AQ96PE3 977 aaPredicted RBP13.25□□□□□ -0.29
PDPN-211ENST00000617617 PSMD10O75832 226 aa13.25□□□□□ -0.29
PDPN-211ENST00000617617 CYP2C8P10632 490 aa13.25□□□□□ -0.29
PDPN-211ENST00000617617 IRF5Q13568 498 aa13.25□□□□□ -0.29
PDPN-211ENST00000617617 NSMFQ6X4W1 530 aa13.25□□□□□ -0.29
PDPN-211ENST00000617617 KRBA2Q6ZNG9 492 aa13.25□□□□□ -0.29
PDPN-211ENST00000617617 DIS3Q9Y2L1 958 aaKnown RBP13.25□□□□□ -0.29
PDPN-211ENST00000617617 MCM3APO60318 1980 aa13.25□□□□□ -0.29
PDPN-211ENST00000617617 ALDH1A1P00352 501 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 MYL1P05976 194 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 SLFN14P0C7P3 912 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 ITGB5P18084 799 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 MAPK4P31152 587 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 APLP1P51693 650 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 MDM2Q00987 491 aaPredicted RBP13.24□□□□□ -0.29
PDPN-211ENST00000617617 PRR16Q569H4 304 aa13.24□□□□□ -0.29
PDPN-211ENST00000617617 PLA2G4DQ86XP0 818 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms