RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 SEC62Q99442 399 aaKnown RBP10.02□□□□□ -0.81
GPC6-202ENST00000617456 ZBED2Q9BTP6 218 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 MAF1Q9H063 256 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 C11orf16Q9NQ32 467 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 INCENPQ9NQS7 918 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 TCP11L1Q9NUJ3 509 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 ADD3Q9UEY8 706 aaKnown RBP10.02□□□□□ -0.81
GPC6-202ENST00000617456 PNMA2Q9UL42 364 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 MTUS1Q9ULD2 1270 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.02□□□□□ -0.81
GPC6-202ENST00000617456 HIP1O00291 1037 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 LPXNO60711 386 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 GPR37L1O60883 481 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 FAM193AP78312 1265 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 NUCB1Q02818 461 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 PDE4DQ08499 809 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 BFSP2Q13515 415 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 PPP2R5BQ15173 497 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 NFRKBQ6P4R8 1299 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 SLC30A10Q6XR72 485 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 ALYREFQ86V81 257 aaKnown RBP10.01□□□□□ -0.81
GPC6-202ENST00000617456 CHD1LQ86WJ1 897 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 CEP120Q8N960 986 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 OTUD7AQ8TE49 926 aaPredicted RBP10.01□□□□□ -0.81
GPC6-202ENST00000617456 TTC14Q96N46 770 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 UIMC1Q96RL1 719 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 GPCPD1Q9NPB8 672 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 CD320Q9NPF0 282 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 IL17RBQ9NRM6 502 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 ARIH1Q9Y4X5 557 aaPredicted RBP10.01□□□□□ -0.81
GPC6-202ENST00000617456 FRMPD2Q68DX3 1309 aaPredicted RBP10.01□□□□□ -0.81
GPC6-202ENST00000617456 RAD50Q92878 1312 aa10.01□□□□□ -0.81
GPC6-202ENST00000617456 LOC102724159A0A0B4J2E5 919 aa10□□□□□ -0.81
GPC6-202ENST00000617456 RBM47A0AV96 593 aaKnown RBP10□□□□□ -0.81
GPC6-202ENST00000617456 PITPNM1O00562 1244 aa10□□□□□ -0.81
GPC6-202ENST00000617456 FOXP2O15409 715 aa10□□□□□ -0.81
GPC6-202ENST00000617456 RANBP6O60518 1105 aaKnown RBP10□□□□□ -0.81
GPC6-202ENST00000617456 BAIAP3O94812 1187 aa10□□□□□ -0.81
GPC6-202ENST00000617456 FGAP02671 866 aa10□□□□□ -0.81
GPC6-202ENST00000617456 WDR5P61964 334 aaKnown RBP10□□□□□ -0.81
GPC6-202ENST00000617456 DEFB103AP81534 67 aa10□□□□□ -0.81
GPC6-202ENST00000617456 PWP2Q15269 919 aaKnown RBP10□□□□□ -0.81
GPC6-202ENST00000617456 PTGISQ16647 500 aa10□□□□□ -0.81
GPC6-202ENST00000617456 SYDE2Q5VT97 1194 aa10□□□□□ -0.81
GPC6-202ENST00000617456 FAM117BQ6P1L5 589 aa10□□□□□ -0.81
GPC6-202ENST00000617456 DCAF4Q8WV16 495 aa10□□□□□ -0.81
GPC6-202ENST00000617456 MAP7D2Q96T17 732 aa10□□□□□ -0.81
GPC6-202ENST00000617456 RANBP17Q9H2T7 1088 aaKnown RBP10□□□□□ -0.81
GPC6-202ENST00000617456 LCTP09848 1927 aa9.99□□□□□ -0.81
GPC6-202ENST00000617456 SCN10AQ9Y5Y9 1956 aa9.99□□□□□ -0.81
GPC6-202ENST00000617456 PI4K2BG5E9Z4 385 aa9.99□□□□□ -0.81
GPC6-202ENST00000617456 NKRFO15226 690 aaKnown RBP eCLIP9.99□□□□□ -0.81
GPC6-202ENST00000617456 KPNA6O60684 536 aa9.99□□□□□ -0.81
GPC6-202ENST00000617456 TXNP10599 105 aaKnown RBP9.99□□□□□ -0.81
GPC6-202ENST00000617456 HSPD1P10809 573 aaKnown RBP9.99□□□□□ -0.81
GPC6-202ENST00000617456 SSTR3P32745 418 aaPredicted RBP9.99□□□□□ -0.81
GPC6-202ENST00000617456 PTPN11Q06124 597 aaPredicted RBP9.99□□□□□ -0.81
GPC6-202ENST00000617456 CCDC178Q5BJE1 867 aa9.99□□□□□ -0.81
GPC6-202ENST00000617456 RNF207Q6ZRF8 634 aa9.99□□□□□ -0.81
GPC6-202ENST00000617456 CCDC155Q8N6L0 562 aa9.99□□□□□ -0.81
GPC6-202ENST00000617456 SCFD2Q8WU76 684 aa9.99□□□□□ -0.81
GPC6-202ENST00000617456 ZNF830Q96NB3 372 aaPredicted RBP9.99□□□□□ -0.81
GPC6-202ENST00000617456 RNF41Q9H4P4 317 aaPredicted RBP9.99□□□□□ -0.81
GPC6-202ENST00000617456 UBE2ZQ9H832 354 aaPredicted RBP9.99□□□□□ -0.81
GPC6-202ENST00000617456 TOMM22Q9NS69 142 aa9.99□□□□□ -0.81
GPC6-202ENST00000617456 TRIP12Q14669 1992 aaPredicted RBP9.98□□□□□ -0.81
GPC6-202ENST00000617456 A6NJR5 290 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 MAFGO15525 162 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 ARIH2O95376 493 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 KCNA5P22460 613 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 RPS6P62753 249 aaKnown RBP9.98□□□□□ -0.81
GPC6-202ENST00000617456 SLC20A2Q08357 652 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 GPNMBQ14956 572 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 TCTN1Q2MV58 587 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 RRP12Q5JTH9 1297 aaKnown RBP9.98□□□□□ -0.81
GPC6-202ENST00000617456 TAF3Q5VWG9 929 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 GDF6Q6KF10 455 aaPredicted RBP9.98□□□□□ -0.81
GPC6-202ENST00000617456 BTNL9Q6UXG8 535 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 LRRC8DQ7L1W4 858 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 CHST3Q7LGC8 479 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 PLEKHM2Q8IWE5 1019 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 GJD3Q8N144 294 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 CAGE1Q8TC20 777 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 AFG1LQ8WV93 481 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 CLEC4DQ8WXI8 215 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 TGS1Q96RS0 853 aaKnown RBP9.98□□□□□ -0.81
GPC6-202ENST00000617456 MPHOSPH6Q99547 160 aaKnown RBP9.98□□□□□ -0.81
GPC6-202ENST00000617456 SUGCTQ9HAC7 445 aa9.98□□□□□ -0.81
GPC6-202ENST00000617456 COL4A4P53420 1690 aaPredicted RBP9.97□□□□□ -0.81
GPC6-202ENST00000617456 ABCB7O75027 752 aa9.97□□□□□ -0.81
GPC6-202ENST00000617456 MMP3P08254 477 aa9.97□□□□□ -0.81
GPC6-202ENST00000617456 TOP1P11387 765 aaKnown RBP9.97□□□□□ -0.81
GPC6-202ENST00000617456 SELPP16109 830 aa9.97□□□□□ -0.81
GPC6-202ENST00000617456 SDSP20132 328 aa9.97□□□□□ -0.81
GPC6-202ENST00000617456 LY6KQ17RY6 165 aa9.97□□□□□ -0.81
GPC6-202ENST00000617456 CNKSR3Q6P9H4 555 aa9.97□□□□□ -0.81
GPC6-202ENST00000617456 SEPT14Q6ZU15 432 aa9.97□□□□□ -0.81
GPC6-202ENST00000617456 FAM178BQ8IXR5 827 aa9.97□□□□□ -0.81
GPC6-202ENST00000617456 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.97□□□□□ -0.81
GPC6-202ENST00000617456 AFAP1L1Q8TED9 768 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms