RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 GPR75-ASB3A0A0A6YYF3 556 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 GOLGA8BA8MQT2 603 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 KIF28PB7ZC32 967 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 N4BP3O15049 544 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 TOM1O60784 492 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 MBD4O95243 580 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 MYL1P05976 194 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 IGHMBP2P38935 993 aaKnown RBP12.73□□□□□ -0.37
TP53-222ENST00000617185 ACBD5Q5T8D3 534 aaPredicted RBP12.73□□□□□ -0.37
TP53-222ENST00000617185 TBC1D9BQ66K14 1250 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 TBC1D1Q86TI0 1168 aaPredicted RBP12.73□□□□□ -0.37
TP53-222ENST00000617185 CREG2Q8IUH2 290 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 MMADHCQ9H3L0 296 aaPredicted RBP12.73□□□□□ -0.37
TP53-222ENST00000617185 C2CD2Q9Y426 696 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 ASB3Q9Y575 518 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 AHDC1Q5TGY3 1603 aaPredicted RBP12.73□□□□□ -0.37
TP53-222ENST00000617185 VIMP08670 466 aaKnown RBP12.73□□□□□ -0.37
TP53-222ENST00000617185 SLC5A1P13866 664 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 KLRK1P26718 216 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 MRPS35P82673 323 aaKnown RBP12.73□□□□□ -0.37
TP53-222ENST00000617185 SEPT2Q15019 361 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 SLC4A8Q2Y0W8 1093 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 CDKAL1Q5VV42 579 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 CYB5R4Q7L1T6 521 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 IFT20Q8IY31 132 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 CCDC82Q8N4S0 544 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.73□□□□□ -0.37
TP53-222ENST00000617185 NAF1Q96HR8 494 aaKnown RBP12.73□□□□□ -0.37
TP53-222ENST00000617185 CHP1Q99653 195 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 TAF1DQ9H5J8 278 aaPredicted RBP12.73□□□□□ -0.37
TP53-222ENST00000617185 CEP131Q9UPN4 1083 aa12.73□□□□□ -0.37
TP53-222ENST00000617185 THRAP3Q9Y2W1 955 aaKnown RBP12.73□□□□□ -0.37
TP53-222ENST00000617185 GOLGA6L10A0A0M3HER8 536 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 A0A1B0GVG6 124 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 IFIT3O14879 490 aaKnown RBP12.72□□□□□ -0.37
TP53-222ENST00000617185 PAEPP09466 180 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 FGFR2P21802 821 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 SFSWAPQ12872 951 aaKnown RBP12.72□□□□□ -0.37
TP53-222ENST00000617185 PTPAQ15257 358 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 TAF11Q15544 211 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 CDC37Q16543 378 aaPredicted RBP12.72□□□□□ -0.37
TP53-222ENST00000617185 IFI16Q16666 785 aaKnown RBP12.72□□□□□ -0.37
TP53-222ENST00000617185 CCDC152Q4G0S7 254 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 HAUS3Q68CZ6 603 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 ANKS4BQ8N8V4 417 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 TMBIM4Q9HC24 238 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 SNX12Q9UMY4 172 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 CREB3O43889 395 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
TP53-222ENST00000617185 ZFYP08048 801 aaPredicted RBP12.72□□□□□ -0.37
TP53-222ENST00000617185 HERVK_113P62684 666 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 CCDC178Q5BJE1 867 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 MICU3Q86XE3 530 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 TRIM42Q8IWZ5 723 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 CCDC197Q8NCU1 140 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 CELF1Q92879 486 aaKnown RBP12.72□□□□□ -0.37
TP53-222ENST00000617185 MKL1Q969V6 931 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 PRDM16Q9HAZ2 1276 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.72□□□□□ -0.37
TP53-222ENST00000617185 NWD2Q9ULI1 1742 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 AKAP11Q9UKA4 1901 aa12.72□□□□□ -0.37
TP53-222ENST00000617185 LTBP4Q8N2S1 1624 aa12.71□□□□□ -0.37
TP53-222ENST00000617185 GNPATO15228 680 aa12.71□□□□□ -0.37
TP53-222ENST00000617185 EVI5O60447 810 aa12.71□□□□□ -0.37
TP53-222ENST00000617185 ATP2A2P16615 1042 aaKnown RBP12.71□□□□□ -0.37
TP53-222ENST00000617185 LBRQ14739 615 aaKnown RBP12.71□□□□□ -0.37
TP53-222ENST00000617185 KIAA0753Q2KHM9 967 aa12.71□□□□□ -0.37
TP53-222ENST00000617185 C8orf74Q6P047 294 aa12.71□□□□□ -0.37
TP53-222ENST00000617185 SDR42E1Q8WUS8 393 aa12.71□□□□□ -0.37
TP53-222ENST00000617185 CCDC97Q96F63 343 aaPredicted RBP12.71□□□□□ -0.37
TP53-222ENST00000617185 RBM17Q96I25 401 aaKnown RBP12.71□□□□□ -0.37
TP53-222ENST00000617185 CDCA7Q9BWT1 371 aaPredicted RBP12.71□□□□□ -0.37
TP53-222ENST00000617185 ZCWPW1Q9H0M4 648 aa12.71□□□□□ -0.37
TP53-222ENST00000617185 EPB41L4AQ9HCS5 686 aaPredicted RBP12.71□□□□□ -0.37
TP53-222ENST00000617185 KCNMB3Q9NPA1 279 aa12.71□□□□□ -0.37
TP53-222ENST00000617185 DNAAF2Q9NVR5 837 aaKnown RBP12.71□□□□□ -0.37
TP53-222ENST00000617185 LRP2BPQ9P2M1 347 aa12.71□□□□□ -0.37
TP53-222ENST00000617185 MYH3P11055 1940 aa12.71□□□□□ -0.37
TP53-222ENST00000617185 SYNRGQ9UMZ2 1314 aa12.71□□□□□ -0.37
TP53-222ENST00000617185 RNF225M0QZC1 329 aaPredicted RBP12.71□□□□□ -0.38
TP53-222ENST00000617185 PRLRP16471 622 aa12.71□□□□□ -0.38
TP53-222ENST00000617185 MATR3P43243 847 aaKnown RBP eCLIP12.71□□□□□ -0.38
TP53-222ENST00000617185 ADGRA1Q86SQ6 560 aa12.71□□□□□ -0.38
TP53-222ENST00000617185 LMNTD2Q8IXW0 634 aa12.71□□□□□ -0.38
TP53-222ENST00000617185 MB21D2Q8IYB1 491 aaPredicted RBP12.71□□□□□ -0.38
TP53-222ENST00000617185 CMTR1Q8N1G2 835 aaKnown RBP12.71□□□□□ -0.38
TP53-222ENST00000617185 LCORLQ8N3X6 602 aa12.71□□□□□ -0.38
TP53-222ENST00000617185 NCOA7Q8NI08 942 aa12.71□□□□□ -0.38
TP53-222ENST00000617185 RAPGEF5Q92565 580 aa12.71□□□□□ -0.38
TP53-222ENST00000617185 PHKBQ93100 1093 aa12.71□□□□□ -0.38
TP53-222ENST00000617185 SWAP70Q9UH65 585 aa12.71□□□□□ -0.38
TP53-222ENST00000617185 TACC3Q9Y6A5 838 aa12.71□□□□□ -0.38
TP53-222ENST00000617185 SPEF2Q9C093 1822 aa12.71□□□□□ -0.38
TP53-222ENST00000617185 MROH5Q6ZUA9 1318 aa12.71□□□□□ -0.38
TP53-222ENST00000617185 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
TP53-222ENST00000617185 MYZAPP0CAP1 466 aa12.7□□□□□ -0.38
TP53-222ENST00000617185 MAP3K12Q12852 859 aa12.7□□□□□ -0.38
TP53-222ENST00000617185 SGSM1Q2NKQ1 1148 aa12.7□□□□□ -0.38
TP53-222ENST00000617185 FKBP15Q5T1M5 1219 aa12.7□□□□□ -0.38
TP53-222ENST00000617185 PIDD1Q9HB75 910 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms