RNA–Protein interactions for RNA: ENST00000616795.1

CCDC113-206, Transcript of coiled-coil domain containing 113, humanhuman

TSL 5 BASIC

Gene CCDC113, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-206ENST00000616795 SLC34A2O95436 690 aa15.73■□□□□ 0.11
CCDC113-206ENST00000616795 CASTP20810 708 aaKnown RBP15.73■□□□□ 0.11
CCDC113-206ENST00000616795 CDC27P30260 824 aa15.73■□□□□ 0.11
CCDC113-206ENST00000616795 PSMC6P62333 389 aa15.73■□□□□ 0.11
CCDC113-206ENST00000616795 USP17L6PQ6QN14 398 aa15.73■□□□□ 0.11
CCDC113-206ENST00000616795 FAM126BQ8IXS8 530 aa15.73■□□□□ 0.11
CCDC113-206ENST00000616795 SLC43A3Q8NBI5 491 aa15.73■□□□□ 0.11
CCDC113-206ENST00000616795 GPKOWQ92917 476 aaPredicted RBP eCLIP15.73■□□□□ 0.11
CCDC113-206ENST00000616795 BADQ92934 168 aa15.73■□□□□ 0.11
CCDC113-206ENST00000616795 BRF1Q92994 677 aa15.73■□□□□ 0.11
CCDC113-206ENST00000616795 AGXT2Q9BYV1 514 aa15.73■□□□□ 0.11
CCDC113-206ENST00000616795 A6NJR5 290 aa15.72■□□□□ 0.11
CCDC113-206ENST00000616795 KIAA0355O15063 1070 aa15.72■□□□□ 0.11
CCDC113-206ENST00000616795 CABYRO75952 493 aa15.72■□□□□ 0.11
CCDC113-206ENST00000616795 MYL3P08590 195 aa15.72■□□□□ 0.11
CCDC113-206ENST00000616795 CPT1AP50416 773 aa15.72■□□□□ 0.11
CCDC113-206ENST00000616795 FGD1P98174 961 aa15.72■□□□□ 0.11
CCDC113-206ENST00000616795 PURAQ00577 322 aaKnown RBP15.72■□□□□ 0.11
CCDC113-206ENST00000616795 ARHGAP1Q07960 439 aa15.72■□□□□ 0.11
CCDC113-206ENST00000616795 ITGA7Q13683 1181 aa15.72■□□□□ 0.11
CCDC113-206ENST00000616795 VSIG10LQ86VR7 867 aa15.72■□□□□ 0.11
CCDC113-206ENST00000616795 LBHD1Q9BQE6 289 aaPredicted RBP15.72■□□□□ 0.11
CCDC113-206ENST00000616795 TMEM39AQ9NV64 488 aa15.72■□□□□ 0.11
CCDC113-206ENST00000616795 DDX41Q9UJV9 622 aaKnown RBP15.72■□□□□ 0.11
CCDC113-206ENST00000616795 TBX21Q9UL17 535 aa15.72■□□□□ 0.11
CCDC113-206ENST00000616795 NAP1L2Q9ULW6 460 aaPredicted RBP15.72■□□□□ 0.11
CCDC113-206ENST00000616795 MROH7Q68CQ1 1323 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 DCDC2CA8MYV0 355 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 PIK3CDO00329 1044 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 SOX1O00570 391 aaPredicted RBP15.71■□□□□ 0.11
CCDC113-206ENST00000616795 GH1P01241 217 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 PSMA5P28066 241 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 CCND2P30279 289 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 RCAN1P53805 252 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 MRPS9P82933 396 aaKnown RBP15.71■□□□□ 0.11
CCDC113-206ENST00000616795 WWC2Q6AWC2 1192 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 TYW1BQ6NUM6 668 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 HEATR3Q7Z4Q2 680 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 TDHQ8IZJ6 230 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 FBXL16Q8N461 479 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 SMARCC2Q8TAQ2 1214 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 AFG1LQ8WV93 481 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 POLR3EQ9NVU0 708 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 MRVI1Q9Y6F6 885 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 NID2Q14112 1375 aa15.71■□□□□ 0.11
CCDC113-206ENST00000616795 CD4P01730 458 aa15.7■□□□□ 0.1
CCDC113-206ENST00000616795 ADD1P35611 737 aaKnown RBP15.7■□□□□ 0.1
CCDC113-206ENST00000616795 METAP2P50579 478 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCDC113-206ENST00000616795 UBE2SQ16763 222 aa15.7■□□□□ 0.1
CCDC113-206ENST00000616795 RUFY3Q7L099 469 aa15.7■□□□□ 0.1
CCDC113-206ENST00000616795 PPP1R13LQ8WUF5 828 aa15.7■□□□□ 0.1
CCDC113-206ENST00000616795 CUL5Q93034 780 aa15.7■□□□□ 0.1
CCDC113-206ENST00000616795 MTG1Q9BT17 334 aaPredicted RBP15.7■□□□□ 0.1
CCDC113-206ENST00000616795 ZSWIM6Q9HCJ5 1215 aa15.7■□□□□ 0.1
CCDC113-206ENST00000616795 MMP3P08254 477 aa15.69■□□□□ 0.1
CCDC113-206ENST00000616795 RAG1P15918 1043 aa15.69■□□□□ 0.1
CCDC113-206ENST00000616795 TOB2Q14106 344 aaPredicted RBP15.69■□□□□ 0.1
CCDC113-206ENST00000616795 PSTPIP2Q9H939 334 aa15.69■□□□□ 0.1
CCDC113-206ENST00000616795 V9GY48 417 aaPredicted RBP15.69■□□□□ 0.1
CCDC113-206ENST00000616795 LAMA2P24043 3122 aaKnown RBP15.68■□□□□ 0.1
CCDC113-206ENST00000616795 STXBP3O00186 592 aa15.68■□□□□ 0.1
CCDC113-206ENST00000616795 TLR3O15455 904 aaKnown RBP15.68■□□□□ 0.1
CCDC113-206ENST00000616795 SORBS3O60504 671 aa15.68■□□□□ 0.1
CCDC113-206ENST00000616795 B4GALT4O60513 344 aa15.68■□□□□ 0.1
CCDC113-206ENST00000616795 UBA1P22314 1058 aaKnown RBP15.68■□□□□ 0.1
CCDC113-206ENST00000616795 EPHB4P54760 987 aa15.68■□□□□ 0.1
CCDC113-206ENST00000616795 SP2Q02086 613 aa15.68■□□□□ 0.1
CCDC113-206ENST00000616795 SEMA3FQ13275 785 aa15.68■□□□□ 0.1
CCDC113-206ENST00000616795 BRDTQ58F21 947 aaPredicted RBP15.68■□□□□ 0.1
CCDC113-206ENST00000616795 EMID1Q96A84 441 aaPredicted RBP15.68■□□□□ 0.1
CCDC113-206ENST00000616795 LRCH3Q96II8 777 aa15.68■□□□□ 0.1
CCDC113-206ENST00000616795 UPF3BQ9BZI7 483 aaKnown RBP15.68■□□□□ 0.1
CCDC113-206ENST00000616795 TM6SF1Q9BZW5 370 aa15.68■□□□□ 0.1
CCDC113-206ENST00000616795 TRPV6Q9H1D0 765 aa15.68■□□□□ 0.1
CCDC113-206ENST00000616795 RTEL1Q9NZ71 1219 aa15.68■□□□□ 0.1
CCDC113-206ENST00000616795 KPNA6O60684 536 aa15.67■□□□□ 0.1
CCDC113-206ENST00000616795 TIMP1P01033 207 aa15.67■□□□□ 0.1
CCDC113-206ENST00000616795 NAPAP54920 295 aa15.67■□□□□ 0.1
CCDC113-206ENST00000616795 EVCP57679 992 aa15.67■□□□□ 0.1
CCDC113-206ENST00000616795 NBPF20Q3BBV1 942 aa15.67■□□□□ 0.1
CCDC113-206ENST00000616795 C9orf50Q5SZB4 431 aa15.67■□□□□ 0.1
CCDC113-206ENST00000616795 DHX37Q8IY37 1157 aaKnown RBP15.67■□□□□ 0.1
CCDC113-206ENST00000616795 KAT2BQ92831 832 aa15.67■□□□□ 0.1
CCDC113-206ENST00000616795 INPP4AQ96PE3 977 aaPredicted RBP15.67■□□□□ 0.1
CCDC113-206ENST00000616795 SEZ6LQ9BYH1 1024 aa15.67■□□□□ 0.1
CCDC113-206ENST00000616795 PPP1R12CQ9BZL4 782 aa15.67■□□□□ 0.1
CCDC113-206ENST00000616795 ALDH8A1Q9H2A2 487 aaPredicted RBP15.67■□□□□ 0.1
CCDC113-206ENST00000616795 BCAS3Q9H6U6 928 aa15.67■□□□□ 0.1
CCDC113-206ENST00000616795 CYP46A1Q9Y6A2 500 aa15.67■□□□□ 0.1
CCDC113-206ENST00000616795 GGPS1O95749 300 aa15.66■□□□□ 0.1
CCDC113-206ENST00000616795 PDIA3P30101 505 aaKnown RBP15.66■□□□□ 0.1
CCDC113-206ENST00000616795 ICAM3P32942 547 aa15.66■□□□□ 0.1
CCDC113-206ENST00000616795 LAMC2Q13753 1193 aa15.66■□□□□ 0.1
CCDC113-206ENST00000616795 SHHQ15465 462 aa15.66■□□□□ 0.1
CCDC113-206ENST00000616795 NTRK3Q16288 839 aa15.66■□□□□ 0.1
CCDC113-206ENST00000616795 LRIT3Q3SXY7 679 aa15.66■□□□□ 0.1
CCDC113-206ENST00000616795 CELF3Q5SZQ8 465 aaKnown RBP15.66■□□□□ 0.1
CCDC113-206ENST00000616795 MYSM1Q5VVJ2 828 aa15.66■□□□□ 0.1
CCDC113-206ENST00000616795 PCNX4Q63HM2 1172 aa15.66■□□□□ 0.1
CCDC113-206ENST00000616795 PPP1R18Q6NYC8 613 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms